RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 SMAPO00193 183 aa8.87□□□□□ -0.99
AC055855.3-201ENST00000564269 RANGAP1P46060 587 aaPredicted RBP8.87□□□□□ -0.99
AC055855.3-201ENST00000564269 DENND4BO75064 1496 aaPredicted RBP8.87□□□□□ -0.99
AC055855.3-201ENST00000564269 FHOD3Q2V2M9 1422 aa8.87□□□□□ -0.99
AC055855.3-201ENST00000564269 BCORL1Q5H9F3 1711 aa8.86□□□□□ -0.99
AC055855.3-201ENST00000564269 HSPA2P54652 639 aa8.86□□□□□ -0.99
AC055855.3-201ENST00000564269 MADDQ8WXG6 1647 aa8.86□□□□□ -0.99
AC055855.3-201ENST00000564269 FANCAO15360 1455 aa8.85□□□□□ -0.99
AC055855.3-201ENST00000564269 MLLT3P42568 568 aaPredicted RBP8.85□□□□□ -0.99
AC055855.3-201ENST00000564269 CERKQ8TCT0 537 aa8.85□□□□□ -0.99
AC055855.3-201ENST00000564269 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
AC055855.3-201ENST00000564269 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
AC055855.3-201ENST00000564269 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
AC055855.3-201ENST00000564269 YEATS2Q9ULM3 1422 aa8.84□□□□□ -0.99
AC055855.3-201ENST00000564269 LRCH3Q96II8 777 aa8.83□□□□□ -1
AC055855.3-201ENST00000564269 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
AC055855.3-201ENST00000564269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.83□□□□□ -1
AC055855.3-201ENST00000564269 ARHGEF40Q8TER5 1519 aa8.83□□□□□ -1
AC055855.3-201ENST00000564269 POGZQ7Z3K3 1410 aa8.82□□□□□ -1
AC055855.3-201ENST00000564269 TATDN2Q93075 761 aa8.82□□□□□ -1
AC055855.3-201ENST00000564269 NPDC1Q9NQX5 325 aaPredicted RBP8.82□□□□□ -1
AC055855.3-201ENST00000564269 PNMA3Q9UL41 463 aa8.82□□□□□ -1
AC055855.3-201ENST00000564269 MAGI2Q86UL8 1455 aa8.82□□□□□ -1
AC055855.3-201ENST00000564269 PLCB2Q00722 1185 aa8.81□□□□□ -1
AC055855.3-201ENST00000564269 MLECQ14165 292 aa8.81□□□□□ -1
AC055855.3-201ENST00000564269 IFFO2Q5TF58 517 aa8.81□□□□□ -1
AC055855.3-201ENST00000564269 PLCH2O75038 1416 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 EEA1Q15075 1411 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 SCAPERQ9BY12 1400 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 ZMYM4Q5VZL5 1548 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 NBPF26B4DH59 902 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
AC055855.3-201ENST00000564269 RICTORQ6R327 1708 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 ZFYVE16Q7Z3T8 1539 aa8.8□□□□□ -1
AC055855.3-201ENST00000564269 RIMS1Q86UR5 1692 aaKnown RBP8.79□□□□□ -1
AC055855.3-201ENST00000564269 PADI6Q6TGC4 694 aa8.79□□□□□ -1
AC055855.3-201ENST00000564269 NUDT18Q6ZVK8 323 aa8.79□□□□□ -1
AC055855.3-201ENST00000564269 EFCAB5A4FU69 1503 aa8.79□□□□□ -1
AC055855.3-201ENST00000564269 TTC37Q6PGP7 1564 aa8.78□□□□□ -1
AC055855.3-201ENST00000564269 SIGLEC1Q9BZZ2 1709 aa8.78□□□□□ -1
AC055855.3-201ENST00000564269 A0A0G2JS52 829 aa8.78□□□□□ -1
AC055855.3-201ENST00000564269 ITGBL1O95965 494 aaPredicted RBP8.78□□□□□ -1
AC055855.3-201ENST00000564269 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
AC055855.3-201ENST00000564269 RBM27Q9P2N5 1060 aaKnown RBP8.78□□□□□ -1
AC055855.3-201ENST00000564269 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
AC055855.3-201ENST00000564269 HECW1Q76N89 1606 aa8.77□□□□□ -1.01
AC055855.3-201ENST00000564269 CDK13Q14004 1512 aaKnown RBP8.77□□□□□ -1.01
AC055855.3-201ENST00000564269 CEBPAP49715 358 aaPredicted RBP8.77□□□□□ -1.01
AC055855.3-201ENST00000564269 EFCAB2Q5VUJ9 269 aa8.77□□□□□ -1.01
AC055855.3-201ENST00000564269 TTC13Q8NBP0 860 aa8.77□□□□□ -1.01
AC055855.3-201ENST00000564269 ATP10AO60312 1499 aa8.77□□□□□ -1.01
AC055855.3-201ENST00000564269 PPP4CP60510 307 aa8.76□□□□□ -1.01
AC055855.3-201ENST00000564269 ARHGEF12Q9NZN5 1544 aa8.75□□□□□ -1.01
AC055855.3-201ENST00000564269 C9orf84Q5VXU9 1444 aa8.75□□□□□ -1.01
AC055855.3-201ENST00000564269 AFAP1Q8N556 730 aa8.75□□□□□ -1.01
AC055855.3-201ENST00000564269 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
AC055855.3-201ENST00000564269 SEMA3EO15041 775 aa8.74□□□□□ -1.01
AC055855.3-201ENST00000564269 CDK11AQ9UQ88 783 aaPredicted RBP8.74□□□□□ -1.01
AC055855.3-201ENST00000564269 RNF40O75150 1001 aa8.73□□□□□ -1.01
AC055855.3-201ENST00000564269 FMN1Q68DA7 1419 aa8.72□□□□□ -1.01
AC055855.3-201ENST00000564269 ZNF518AQ6AHZ1 1483 aa8.72□□□□□ -1.01
AC055855.3-201ENST00000564269 UBTFP17480 764 aaKnown RBP8.72□□□□□ -1.01
AC055855.3-201ENST00000564269 KCNC4Q03721 635 aa8.72□□□□□ -1.01
AC055855.3-201ENST00000564269 PTGDRQ13258 359 aa8.72□□□□□ -1.01
AC055855.3-201ENST00000564269 ARHGAP35Q9NRY4 1499 aa8.71□□□□□ -1.01
AC055855.3-201ENST00000564269 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
AC055855.3-201ENST00000564269 SWT1Q5T5J6 900 aaKnown RBP8.71□□□□□ -1.02
AC055855.3-201ENST00000564269 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
AC055855.3-201ENST00000564269 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.02
AC055855.3-201ENST00000564269 ILDR2Q71H61 639 aa8.7□□□□□ -1.02
AC055855.3-201ENST00000564269 EYA1Q99502 592 aa8.7□□□□□ -1.02
AC055855.3-201ENST00000564269 FER1L4A9Z1Z3 1794 aa8.69□□□□□ -1.02
AC055855.3-201ENST00000564269 RGS20O76081 388 aa8.69□□□□□ -1.02
AC055855.3-201ENST00000564269 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
AC055855.3-201ENST00000564269 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
AC055855.3-201ENST00000564269 ARHGAP5Q13017 1502 aa8.69□□□□□ -1.02
AC055855.3-201ENST00000564269 KDM5CP41229 1560 aa8.69□□□□□ -1.02
AC055855.3-201ENST00000564269 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
AC055855.3-201ENST00000564269 PTPRTO14522 1441 aa8.68□□□□□ -1.02
AC055855.3-201ENST00000564269 MLH3Q9UHC1 1453 aa8.68□□□□□ -1.02
AC055855.3-201ENST00000564269 KIF14Q15058 1648 aa8.68□□□□□ -1.02
AC055855.3-201ENST00000564269 CLIP1P30622 1438 aa8.67□□□□□ -1.02
AC055855.3-201ENST00000564269 APLP1P51693 650 aa8.67□□□□□ -1.02
AC055855.3-201ENST00000564269 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
AC055855.3-201ENST00000564269 TJAP1Q5JTD0 557 aa8.67□□□□□ -1.02
AC055855.3-201ENST00000564269 PREX1Q8TCU6 1659 aa8.67□□□□□ -1.02
AC055855.3-201ENST00000564269 TRAPPC8Q9Y2L5 1435 aa8.67□□□□□ -1.02
AC055855.3-201ENST00000564269 REREQ9P2R6 1566 aa8.66□□□□□ -1.02
AC055855.3-201ENST00000564269 DIP2CQ9Y2E4 1556 aa8.66□□□□□ -1.02
AC055855.3-201ENST00000564269 SOCS7O14512 581 aa8.66□□□□□ -1.02
AC055855.3-201ENST00000564269 MTRQ99707 1265 aa8.66□□□□□ -1.02
AC055855.3-201ENST00000564269 ESF1Q9H501 851 aaKnown RBP8.66□□□□□ -1.02
AC055855.3-201ENST00000564269 STRCQ7RTU9 1775 aa8.66□□□□□ -1.02
AC055855.3-201ENST00000564269 AGLP35573 1532 aa8.65□□□□□ -1.02
AC055855.3-201ENST00000564269 ADGRG1Q9Y653 693 aa8.65□□□□□ -1.02
AC055855.3-201ENST00000564269 MYO5CQ9NQX4 1742 aa8.65□□□□□ -1.03
AC055855.3-201ENST00000564269 TESPA1A2RU30 521 aaPredicted RBP8.64□□□□□ -1.03
AC055855.3-201ENST00000564269 FCHSD2O94868 740 aa8.64□□□□□ -1.03
AC055855.3-201ENST00000564269 RBM26Q5T8P6 1007 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms