RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 PIK3C2GO75747 1445 aa8.35□□□□□ -1.07
LINC01963-201ENST00000562038 TRPM1Q7Z4N2 1603 aa8.35□□□□□ -1.07
LINC01963-201ENST00000562038 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
LINC01963-201ENST00000562038 NALCNQ8IZF0 1738 aa8.35□□□□□ -1.07
LINC01963-201ENST00000562038 RIMS2Q9UQ26 1411 aa8.35□□□□□ -1.07
LINC01963-201ENST00000562038 GLI3P10071 1580 aa8.34□□□□□ -1.07
LINC01963-201ENST00000562038 MYT1LQ9UL68 1186 aa8.34□□□□□ -1.07
LINC01963-201ENST00000562038 SHANK3Q9BYB0 1731 aa8.34□□□□□ -1.08
LINC01963-201ENST00000562038 GGT6Q6P531 493 aa8.33□□□□□ -1.08
LINC01963-201ENST00000562038 MPHOSPH9Q99550 1183 aa8.33□□□□□ -1.08
LINC01963-201ENST00000562038 DHX57Q6P158 1386 aaKnown RBP8.33□□□□□ -1.08
LINC01963-201ENST00000562038 THSD7AQ9UPZ6 1657 aa8.33□□□□□ -1.08
LINC01963-201ENST00000562038 NRAPQ86VF7 1730 aa8.33□□□□□ -1.08
LINC01963-201ENST00000562038 ADGRB1O14514 1584 aa8.32□□□□□ -1.08
LINC01963-201ENST00000562038 CDC42BPGQ6DT37 1551 aa8.32□□□□□ -1.08
LINC01963-201ENST00000562038 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
LINC01963-201ENST00000562038 ADAMTS13Q76LX8 1427 aa8.32□□□□□ -1.08
LINC01963-201ENST00000562038 CHIC2Q9UKJ5 165 aa8.32□□□□□ -1.08
LINC01963-201ENST00000562038 ARHGEF28Q8N1W1 1705 aaKnown RBP8.31□□□□□ -1.08
LINC01963-201ENST00000562038 KCNA6P17658 529 aa8.3□□□□□ -1.08
LINC01963-201ENST00000562038 NGLY1Q96IV0 654 aa8.3□□□□□ -1.08
LINC01963-201ENST00000562038 ABCA3Q99758 1704 aa8.3□□□□□ -1.08
LINC01963-201ENST00000562038 KIF1AQ12756 1690 aa8.3□□□□□ -1.08
LINC01963-201ENST00000562038 GPRASP1Q5JY77 1395 aa8.29□□□□□ -1.08
LINC01963-201ENST00000562038 MAP3K5Q99683 1374 aa8.29□□□□□ -1.08
LINC01963-201ENST00000562038 USP54Q70EL1 1684 aa8.29□□□□□ -1.08
LINC01963-201ENST00000562038 MLECQ14165 292 aa8.29□□□□□ -1.08
LINC01963-201ENST00000562038 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
LINC01963-201ENST00000562038 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
LINC01963-201ENST00000562038 TOPAZ1Q8N9V7 1692 aa8.28□□□□□ -1.08
LINC01963-201ENST00000562038 MSH6P52701 1360 aa8.28□□□□□ -1.08
LINC01963-201ENST00000562038 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
LINC01963-201ENST00000562038 TBX22Q9Y458 520 aa8.28□□□□□ -1.08
LINC01963-201ENST00000562038 TMEM94Q12767 1356 aa8.28□□□□□ -1.08
LINC01963-201ENST00000562038 FMN2Q9NZ56 1722 aa8.27□□□□□ -1.08
LINC01963-201ENST00000562038 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.08
LINC01963-201ENST00000562038 TAOK2Q9UL54 1235 aa8.27□□□□□ -1.08
LINC01963-201ENST00000562038 PLCH1Q4KWH8 1693 aa8.27□□□□□ -1.09
LINC01963-201ENST00000562038 PNPLA6Q8IY17 1366 aa8.27□□□□□ -1.09
LINC01963-201ENST00000562038 IDI1Q13907 227 aa8.27□□□□□ -1.09
LINC01963-201ENST00000562038 YY1P25490 414 aa8.27□□□□□ -1.09
LINC01963-201ENST00000562038 C1QTNF8P60827 252 aa8.27□□□□□ -1.09
LINC01963-201ENST00000562038 SBNO2Q9Y2G9 1366 aa8.26□□□□□ -1.09
LINC01963-201ENST00000562038 EID1Q9Y6B2 187 aa8.25□□□□□ -1.09
LINC01963-201ENST00000562038 SCAF1Q9H7N4 1312 aaKnown RBP8.25□□□□□ -1.09
LINC01963-201ENST00000562038 LRPPRCP42704 1394 aaKnown RBP8.25□□□□□ -1.09
LINC01963-201ENST00000562038 ABCC11Q96J66 1382 aa8.25□□□□□ -1.09
LINC01963-201ENST00000562038 VGFO15240 615 aaPredicted RBP8.25□□□□□ -1.09
LINC01963-201ENST00000562038 FBXO31Q5XUX0 539 aaPredicted RBP8.25□□□□□ -1.09
LINC01963-201ENST00000562038 AATKQ6ZMQ8 1374 aa8.24□□□□□ -1.09
LINC01963-201ENST00000562038 CAMTA1Q9Y6Y1 1673 aa8.24□□□□□ -1.09
LINC01963-201ENST00000562038 SLIT2O94813 1529 aa8.24□□□□□ -1.09
LINC01963-201ENST00000562038 AFF2P51816 1311 aa8.24□□□□□ -1.09
LINC01963-201ENST00000562038 MST1RQ04912 1400 aa8.24□□□□□ -1.09
LINC01963-201ENST00000562038 EIF3AQ14152 1382 aaKnown RBP8.23□□□□□ -1.09
LINC01963-201ENST00000562038 ANKARQ7Z5J8 1434 aa8.22□□□□□ -1.09
LINC01963-201ENST00000562038 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
LINC01963-201ENST00000562038 QRICH2Q9H0J4 1663 aa8.21□□□□□ -1.09
LINC01963-201ENST00000562038 BRD4O60885 1362 aaPredicted RBP8.21□□□□□ -1.09
LINC01963-201ENST00000562038 ADGRL3Q9HAR2 1447 aa8.21□□□□□ -1.1
LINC01963-201ENST00000562038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINC01963-201ENST00000562038 PUS7Q96PZ0 661 aaKnown RBP8.2□□□□□ -1.1
LINC01963-201ENST00000562038 PRELPP51888 382 aa8.2□□□□□ -1.1
LINC01963-201ENST00000562038 TRIM52Q96A61 297 aa8.2□□□□□ -1.1
LINC01963-201ENST00000562038 PODXL2Q9NZ53 605 aa8.2□□□□□ -1.1
LINC01963-201ENST00000562038 C14orf93Q9H972 538 aaKnown RBP8.2□□□□□ -1.1
LINC01963-201ENST00000562038 CRYBG1Q9Y4K1 1723 aa8.19□□□□□ -1.1
LINC01963-201ENST00000562038 MYOM1P52179 1685 aa8.19□□□□□ -1.1
LINC01963-201ENST00000562038 SLAIN2Q9P270 581 aa8.19□□□□□ -1.1
LINC01963-201ENST00000562038 TRPC5Q9UL62 973 aaPredicted RBP8.19□□□□□ -1.1
LINC01963-201ENST00000562038 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
LINC01963-201ENST00000562038 YTHDC2Q9H6S0 1430 aaKnown RBP8.18□□□□□ -1.1
LINC01963-201ENST00000562038 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
LINC01963-201ENST00000562038 CICQ96RK0 1608 aaPredicted RBP8.18□□□□□ -1.1
LINC01963-201ENST00000562038 ABCC6O95255 1503 aa8.18□□□□□ -1.1
LINC01963-201ENST00000562038 WDR90Q96KV7 1748 aa8.18□□□□□ -1.1
LINC01963-201ENST00000562038 TULP4Q9NRJ4 1543 aa8.18□□□□□ -1.1
LINC01963-201ENST00000562038 LTKP29376 864 aa8.17□□□□□ -1.1
LINC01963-201ENST00000562038 ITGAEP38570 1179 aa8.17□□□□□ -1.1
LINC01963-201ENST00000562038 TPRNQ4KMQ1 711 aa8.17□□□□□ -1.1
LINC01963-201ENST00000562038 TXNDC2Q86VQ3 553 aa8.17□□□□□ -1.1
LINC01963-201ENST00000562038 PPARGC1BQ86YN6 1023 aaKnown RBP8.17□□□□□ -1.1
LINC01963-201ENST00000562038 NRKQ7Z2Y5 1582 aa8.16□□□□□ -1.1
LINC01963-201ENST00000562038 MON2Q7Z3U7 1717 aa8.16□□□□□ -1.1
LINC01963-201ENST00000562038 TRPM3Q9HCF6 1732 aaPredicted RBP8.15□□□□□ -1.1
LINC01963-201ENST00000562038 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
LINC01963-201ENST00000562038 QTRT2Q9H974 415 aaKnown RBP8.14□□□□□ -1.11
LINC01963-201ENST00000562038 PEAK1Q9H792 1746 aa8.14□□□□□ -1.11
LINC01963-201ENST00000562038 PHRF1Q9P1Y6 1649 aaKnown RBP8.14□□□□□ -1.11
LINC01963-201ENST00000562038 ALS2Q96Q42 1657 aa8.13□□□□□ -1.11
LINC01963-201ENST00000562038 SENP3-EIF4A1A0A087X0R7 540 aa8.13□□□□□ -1.11
LINC01963-201ENST00000562038 STAG3Q9UJ98 1225 aa8.13□□□□□ -1.11
LINC01963-201ENST00000562038 COL14A1Q05707 1796 aaKnown RBP8.12□□□□□ -1.11
LINC01963-201ENST00000562038 METP08581 1390 aa8.12□□□□□ -1.11
LINC01963-201ENST00000562038 MEX3CQ5U5Q3 659 aaKnown RBP8.12□□□□□ -1.11
LINC01963-201ENST00000562038 ATP7BP35670 1465 aa8.12□□□□□ -1.11
LINC01963-201ENST00000562038 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
LINC01963-201ENST00000562038 PXDNQ92626 1479 aa8.12□□□□□ -1.11
LINC01963-201ENST00000562038 CADPS2Q86UW7 1296 aa8.11□□□□□ -1.11
LINC01963-201ENST00000562038 WNK3Q9BYP7 1800 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms