RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 KDM5DQ9BY66 1539 aa9.72□□□□□ -0.85
IDH3A-204ENST00000558016 PTPN23Q9H3S7 1636 aa9.72□□□□□ -0.85
IDH3A-204ENST00000558016 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
IDH3A-204ENST00000558016 DHX29Q7Z478 1369 aaKnown RBP9.72□□□□□ -0.85
IDH3A-204ENST00000558016 NPATQ14207 1427 aa9.72□□□□□ -0.85
IDH3A-204ENST00000558016 MYO3AQ8NEV4 1616 aa9.71□□□□□ -0.85
IDH3A-204ENST00000558016 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
IDH3A-204ENST00000558016 ZMYM3Q14202 1370 aa9.71□□□□□ -0.86
IDH3A-204ENST00000558016 FAM50AQ14320 339 aaKnown RBP9.7□□□□□ -0.86
IDH3A-204ENST00000558016 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
IDH3A-204ENST00000558016 FGD6Q6ZV73 1430 aa9.7□□□□□ -0.86
IDH3A-204ENST00000558016 KIF15Q9NS87 1388 aa9.69□□□□□ -0.86
IDH3A-204ENST00000558016 FAM135AQ9P2D6 1515 aa9.69□□□□□ -0.86
IDH3A-204ENST00000558016 SHANK2Q9UPX8 1470 aa9.69□□□□□ -0.86
IDH3A-204ENST00000558016 MAST1Q9Y2H9 1570 aa9.69□□□□□ -0.86
IDH3A-204ENST00000558016 CROCC2H7BZ55 1655 aa9.68□□□□□ -0.86
IDH3A-204ENST00000558016 CEP170BQ9Y4F5 1589 aaPredicted RBP9.68□□□□□ -0.86
IDH3A-204ENST00000558016 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
IDH3A-204ENST00000558016 DUOX2Q9NRD8 1548 aa9.67□□□□□ -0.86
IDH3A-204ENST00000558016 DAPK1P53355 1430 aa9.67□□□□□ -0.86
IDH3A-204ENST00000558016 TNRQ92752 1358 aa9.67□□□□□ -0.86
IDH3A-204ENST00000558016 PTCD2Q8WV60 388 aaKnown RBP9.67□□□□□ -0.86
IDH3A-204ENST00000558016 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
IDH3A-204ENST00000558016 PTPRKQ15262 1439 aa9.66□□□□□ -0.86
IDH3A-204ENST00000558016 CRISPLD2Q9H0B8 497 aa9.66□□□□□ -0.86
IDH3A-204ENST00000558016 ZNF142P52746 1687 aaPredicted RBP9.66□□□□□ -0.86
IDH3A-204ENST00000558016 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
IDH3A-204ENST00000558016 DNMT1P26358 1616 aaKnown RBP9.66□□□□□ -0.86
IDH3A-204ENST00000558016 RNF17Q9BXT8 1623 aaKnown RBP9.66□□□□□ -0.86
IDH3A-204ENST00000558016 PZPP20742 1482 aa9.66□□□□□ -0.86
IDH3A-204ENST00000558016 NCOA1Q15788 1441 aa9.65□□□□□ -0.86
IDH3A-204ENST00000558016 KANK1Q14678 1352 aa9.65□□□□□ -0.86
IDH3A-204ENST00000558016 ANKRD30AQ9BXX3 1397 aa9.65□□□□□ -0.86
IDH3A-204ENST00000558016 RRP7BPQ9NSQ0 103 aa9.65□□□□□ -0.86
IDH3A-204ENST00000558016 CHIC2Q9UKJ5 165 aa9.65□□□□□ -0.86
IDH3A-204ENST00000558016 ERBINQ96RT1 1412 aa9.65□□□□□ -0.87
IDH3A-204ENST00000558016 PDE4AP27815 886 aa9.64□□□□□ -0.87
IDH3A-204ENST00000558016 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
IDH3A-204ENST00000558016 FBXO41Q8TF61 875 aa9.64□□□□□ -0.87
IDH3A-204ENST00000558016 ABCC3O15438 1527 aa9.64□□□□□ -0.87
IDH3A-204ENST00000558016 A2ML1A8K2U0 1454 aa9.64□□□□□ -0.87
IDH3A-204ENST00000558016 TCOF1Q13428 1488 aaKnown RBP9.64□□□□□ -0.87
IDH3A-204ENST00000558016 ABCC5O15440 1437 aa9.64□□□□□ -0.87
IDH3A-204ENST00000558016 NCKAP5LQ9HCH0 1330 aa9.63□□□□□ -0.87
IDH3A-204ENST00000558016 SETD1BQ9UPS6 1966 aaKnown RBP9.63□□□□□ -0.87
IDH3A-204ENST00000558016 TBC1D12O60347 775 aa9.63□□□□□ -0.87
IDH3A-204ENST00000558016 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
IDH3A-204ENST00000558016 UPF1Q92900 1129 aaKnown RBP eCLIP9.63□□□□□ -0.87
IDH3A-204ENST00000558016 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
IDH3A-204ENST00000558016 PTPRTO14522 1441 aa9.62□□□□□ -0.87
IDH3A-204ENST00000558016 CEP152O94986 1710 aa9.62□□□□□ -0.87
IDH3A-204ENST00000558016 PLA2R1Q13018 1463 aa9.61□□□□□ -0.87
IDH3A-204ENST00000558016 NLRP1Q9C000 1473 aa9.61□□□□□ -0.87
IDH3A-204ENST00000558016 STRCQ7RTU9 1775 aa9.61□□□□□ -0.87
IDH3A-204ENST00000558016 FBXO31Q5XUX0 539 aaPredicted RBP9.61□□□□□ -0.87
IDH3A-204ENST00000558016 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
IDH3A-204ENST00000558016 CERKQ8TCT0 537 aa9.61□□□□□ -0.87
IDH3A-204ENST00000558016 LARP6Q9BRS8 491 aaKnown RBP9.61□□□□□ -0.87
IDH3A-204ENST00000558016 PRDM15P57071 1507 aaPredicted RBP9.61□□□□□ -0.87
IDH3A-204ENST00000558016 UGGT1Q9NYU2 1555 aa9.6□□□□□ -0.87
IDH3A-204ENST00000558016 ITGAEP38570 1179 aa9.6□□□□□ -0.87
IDH3A-204ENST00000558016 POTEEQ6S8J3 1075 aa9.6□□□□□ -0.87
IDH3A-204ENST00000558016 ERVK-7P63135 1459 aa9.59□□□□□ -0.87
IDH3A-204ENST00000558016 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
IDH3A-204ENST00000558016 AMER1Q5JTC6 1135 aaPredicted RBP9.59□□□□□ -0.87
IDH3A-204ENST00000558016 MROH1Q8NDA8 1641 aa9.59□□□□□ -0.87
IDH3A-204ENST00000558016 OXER1Q8TDS5 423 aa9.58□□□□□ -0.88
IDH3A-204ENST00000558016 POLR1AO95602 1720 aaPredicted RBP9.57□□□□□ -0.88
IDH3A-204ENST00000558016 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
IDH3A-204ENST00000558016 PBX2P40425 430 aa9.57□□□□□ -0.88
IDH3A-204ENST00000558016 THEMISQ8N1K5 641 aaPredicted RBP9.57□□□□□ -0.88
IDH3A-204ENST00000558016 RNF166Q96A37 237 aaPredicted RBP9.57□□□□□ -0.88
IDH3A-204ENST00000558016 DDX27Q96GQ7 796 aaKnown RBP9.57□□□□□ -0.88
IDH3A-204ENST00000558016 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
IDH3A-204ENST00000558016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.57□□□□□ -0.88
IDH3A-204ENST00000558016 ADGRL2O95490 1459 aa9.57□□□□□ -0.88
IDH3A-204ENST00000558016 SPATA31D1Q6ZQQ2 1576 aa9.57□□□□□ -0.88
IDH3A-204ENST00000558016 CADPS2Q86UW7 1296 aa9.56□□□□□ -0.88
IDH3A-204ENST00000558016 ANKLE2Q86XL3 938 aa9.56□□□□□ -0.88
IDH3A-204ENST00000558016 DEPDC5O75140 1603 aa9.56□□□□□ -0.88
IDH3A-204ENST00000558016 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
IDH3A-204ENST00000558016 ZNF335Q9H4Z2 1342 aaPredicted RBP9.56□□□□□ -0.88
IDH3A-204ENST00000558016 BBXQ8WY36 941 aaPredicted RBP9.55□□□□□ -0.88
IDH3A-204ENST00000558016 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
IDH3A-204ENST00000558016 PPP4R3BQ5MIZ7 849 aa9.54□□□□□ -0.88
IDH3A-204ENST00000558016 EFCAB6Q5THR3 1501 aa9.54□□□□□ -0.88
IDH3A-204ENST00000558016 NPHP4O75161 1426 aaPredicted RBP9.54□□□□□ -0.88
IDH3A-204ENST00000558016 PTGER2P43116 358 aa9.52□□□□□ -0.89
IDH3A-204ENST00000558016 PSEN2P49810 448 aa9.52□□□□□ -0.89
IDH3A-204ENST00000558016 ARHGAP31Q2M1Z3 1444 aa9.52□□□□□ -0.89
IDH3A-204ENST00000558016 NEURL4Q96JN8 1562 aa9.52□□□□□ -0.89
IDH3A-204ENST00000558016 EID1Q9Y6B2 187 aa9.52□□□□□ -0.89
IDH3A-204ENST00000558016 SCAF11Q99590 1463 aaKnown RBP9.52□□□□□ -0.89
IDH3A-204ENST00000558016 IQGAP1P46940 1657 aa9.51□□□□□ -0.89
IDH3A-204ENST00000558016 UBAP1LF5GYI3 381 aa9.51□□□□□ -0.89
IDH3A-204ENST00000558016 MFSD10Q14728 455 aa9.51□□□□□ -0.89
IDH3A-204ENST00000558016 BCANQ96GW7 911 aa9.51□□□□□ -0.89
IDH3A-204ENST00000558016 LTBP4Q8N2S1 1624 aa9.51□□□□□ -0.89
IDH3A-204ENST00000558016 IQSEC2Q5JU85 1478 aa9.51□□□□□ -0.89
IDH3A-204ENST00000558016 LMTK2Q8IWU2 1503 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms