RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 HSPA2P54652 639 aa23.57■■□□□ 1.36
LRP1-210ENST00000556247 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
LRP1-210ENST00000556247 SRPK2P78362 688 aaKnown RBP23.55■■□□□ 1.36
LRP1-210ENST00000556247 TULP4Q9NRJ4 1543 aa23.54■■□□□ 1.36
LRP1-210ENST00000556247 PANK3Q9H999 370 aa23.54■■□□□ 1.36
LRP1-210ENST00000556247 CABP2Q9NPB3 220 aa23.53■■□□□ 1.36
LRP1-210ENST00000556247 LMTK3Q96Q04 1460 aa23.53■■□□□ 1.36
LRP1-210ENST00000556247 CDK19Q9BWU1 502 aa23.52■■□□□ 1.36
LRP1-210ENST00000556247 PTCH1Q13635 1447 aa23.51■■□□□ 1.35
LRP1-210ENST00000556247 TMC1Q8TDI8 760 aa23.51■■□□□ 1.35
LRP1-210ENST00000556247 KCNA6P17658 529 aa23.5■■□□□ 1.35
LRP1-210ENST00000556247 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
LRP1-210ENST00000556247 CHD2O14647 1828 aaKnown RBP23.49■■□□□ 1.35
LRP1-210ENST00000556247 WASLO00401 505 aaPredicted RBP23.48■■□□□ 1.35
LRP1-210ENST00000556247 ATAD2Q6PL18 1390 aa23.48■■□□□ 1.35
LRP1-210ENST00000556247 MYOM1P52179 1685 aa23.47■■□□□ 1.35
LRP1-210ENST00000556247 PER1O15534 1290 aaPredicted RBP23.45■■□□□ 1.34
LRP1-210ENST00000556247 SLC12A5Q9H2X9 1139 aa23.45■■□□□ 1.34
LRP1-210ENST00000556247 PRKRIP1Q9H875 184 aaPredicted RBP23.44■■□□□ 1.34
LRP1-210ENST00000556247 KNSTRNQ9Y448 316 aa23.44■■□□□ 1.34
LRP1-210ENST00000556247 NINLQ9Y2I6 1382 aa23.43■■□□□ 1.34
LRP1-210ENST00000556247 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.43■■□□□ 1.34
LRP1-210ENST00000556247 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
LRP1-210ENST00000556247 CCER2I3L3R5 266 aa23.41■■□□□ 1.34
LRP1-210ENST00000556247 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
LRP1-210ENST00000556247 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
LRP1-210ENST00000556247 KTN1Q86UP2 1357 aaKnown RBP23.38■■□□□ 1.33
LRP1-210ENST00000556247 TERF2IPQ9NYB0 399 aa23.37■■□□□ 1.33
LRP1-210ENST00000556247 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
LRP1-210ENST00000556247 NWD1Q149M9 1564 aa23.36■■□□□ 1.33
LRP1-210ENST00000556247 RALBP1Q15311 655 aa23.36■■□□□ 1.33
LRP1-210ENST00000556247 PROSER2Q86WR7 435 aaPredicted RBP23.36■■□□□ 1.33
LRP1-210ENST00000556247 CARD14Q9BXL6 1004 aa23.36■■□□□ 1.33
LRP1-210ENST00000556247 CABP1Q9NZU7 370 aa23.36■■□□□ 1.33
LRP1-210ENST00000556247 ANKRD36BQ8N2N9 1353 aa23.36■■□□□ 1.33
LRP1-210ENST00000556247 HDGFL2Q7Z4V5 671 aaPredicted RBP23.35■■□□□ 1.33
LRP1-210ENST00000556247 CCDC61Q9Y6R9 512 aa23.35■■□□□ 1.33
LRP1-210ENST00000556247 CC2D1BQ5T0F9 858 aaKnown RBP23.34■■□□□ 1.33
LRP1-210ENST00000556247 C14orf37Q86TY3 774 aa23.32■■□□□ 1.32
LRP1-210ENST00000556247 DMRT2Q9Y5R5 561 aa23.32■■□□□ 1.32
LRP1-210ENST00000556247 NSD3Q9BZ95 1437 aa23.32■■□□□ 1.32
LRP1-210ENST00000556247 NKTRP30414 1462 aaKnown RBP23.31■■□□□ 1.32
LRP1-210ENST00000556247 AMER1Q5JTC6 1135 aaPredicted RBP23.31■■□□□ 1.32
LRP1-210ENST00000556247 PPIP5K1Q6PFW1 1433 aa23.31■■□□□ 1.32
LRP1-210ENST00000556247 NPC1L1Q9UHC9 1359 aa23.3■■□□□ 1.32
LRP1-210ENST00000556247 NUTM2FA1L443 756 aa23.3■■□□□ 1.32
LRP1-210ENST00000556247 RBM33Q96EV2 1170 aaKnown RBP23.3■■□□□ 1.32
LRP1-210ENST00000556247 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
LRP1-210ENST00000556247 A0A1W2PP64 1363 aa23.28■■□□□ 1.32
LRP1-210ENST00000556247 ATP7BP35670 1465 aa23.28■■□□□ 1.32
LRP1-210ENST00000556247 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.32
LRP1-210ENST00000556247 ADGRL3Q9HAR2 1447 aa23.27■■□□□ 1.32
LRP1-210ENST00000556247 MYBBP1AQ9BQG0 1328 aaKnown RBP23.27■■□□□ 1.32
LRP1-210ENST00000556247 CGNL1Q0VF96 1302 aa23.26■■□□□ 1.31
LRP1-210ENST00000556247 NALCNQ8IZF0 1738 aa23.25■■□□□ 1.31
LRP1-210ENST00000556247 CD163L1Q9NR16 1453 aa23.25■■□□□ 1.31
LRP1-210ENST00000556247 PLEKHG3A1L390 1219 aa23.25■■□□□ 1.31
LRP1-210ENST00000556247 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
LRP1-210ENST00000556247 CDC42BPGQ6DT37 1551 aa23.24■■□□□ 1.31
LRP1-210ENST00000556247 ZNF692Q9BU19 519 aaPredicted RBP23.24■■□□□ 1.31
LRP1-210ENST00000556247 FMN2Q9NZ56 1722 aa23.23■■□□□ 1.31
LRP1-210ENST00000556247 STRCP1A6NGW2 1772 aa23.22■■□□□ 1.31
LRP1-210ENST00000556247 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
LRP1-210ENST00000556247 NCOA3Q9Y6Q9 1424 aa23.22■■□□□ 1.31
LRP1-210ENST00000556247 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
LRP1-210ENST00000556247 C19orf44Q9H6X5 657 aa23.21■■□□□ 1.31
LRP1-210ENST00000556247 TMEM94Q12767 1356 aa23.21■■□□□ 1.31
LRP1-210ENST00000556247 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
LRP1-210ENST00000556247 TOPAZ1Q8N9V7 1692 aa23.2■■□□□ 1.3
LRP1-210ENST00000556247 MORC1Q86VD1 984 aa23.2■■□□□ 1.3
LRP1-210ENST00000556247 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
LRP1-210ENST00000556247 NSD2O96028 1365 aa23.19■■□□□ 1.3
LRP1-210ENST00000556247 ACEP12821 1306 aa23.19■■□□□ 1.3
LRP1-210ENST00000556247 CCDC184Q52MB2 194 aa23.19■■□□□ 1.3
LRP1-210ENST00000556247 NLRP13Q86W25 1043 aa23.19■■□□□ 1.3
LRP1-210ENST00000556247 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
LRP1-210ENST00000556247 BRD4O60885 1362 aaPredicted RBP23.17■■□□□ 1.3
LRP1-210ENST00000556247 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
LRP1-210ENST00000556247 PMFBP1Q8TBY8 1022 aa23.17■■□□□ 1.3
LRP1-210ENST00000556247 EDC4Q6P2E9 1401 aaKnown RBP23.16■■□□□ 1.3
LRP1-210ENST00000556247 YTHDC1Q96MU7 727 aaKnown RBP23.16■■□□□ 1.3
LRP1-210ENST00000556247 RGPD8O14715 1765 aaPredicted RBP23.16■■□□□ 1.3
LRP1-210ENST00000556247 AKAP12Q02952 1782 aa23.15■■□□□ 1.3
LRP1-210ENST00000556247 ATF3P18847 181 aa23.15■■□□□ 1.3
LRP1-210ENST00000556247 PPP2R1AP30153 589 aa23.15■■□□□ 1.3
LRP1-210ENST00000556247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.15■■□□□ 1.3
LRP1-210ENST00000556247 FYB1O15117 783 aa23.14■■□□□ 1.29
LRP1-210ENST00000556247 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
LRP1-210ENST00000556247 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
LRP1-210ENST00000556247 ESCO1Q5FWF5 840 aa23.12■■□□□ 1.29
LRP1-210ENST00000556247 MON2Q7Z3U7 1717 aa23.12■■□□□ 1.29
LRP1-210ENST00000556247 POLR3AO14802 1390 aaPredicted RBP23.12■■□□□ 1.29
LRP1-210ENST00000556247 MSH6P52701 1360 aa23.12■■□□□ 1.29
LRP1-210ENST00000556247 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
LRP1-210ENST00000556247 LRRC7Q96NW7 1537 aa23.11■■□□□ 1.29
LRP1-210ENST00000556247 DCCP43146 1447 aa23.1■■□□□ 1.29
LRP1-210ENST00000556247 CADPS2Q86UW7 1296 aa23.1■■□□□ 1.29
LRP1-210ENST00000556247 TTC21BQ7Z4L5 1316 aa23.09■■□□□ 1.29
LRP1-210ENST00000556247 USP6P35125 1406 aa23.09■■□□□ 1.29
LRP1-210ENST00000556247 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms