RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 KTN1Q86UP2 1357 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-223ENST00000556142 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
HNRNPC-223ENST00000556142 RALBP1Q15311 655 aa12.98□□□□□ -0.33
HNRNPC-223ENST00000556142 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.98□□□□□ -0.33
HNRNPC-223ENST00000556142 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-223ENST00000556142 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
HNRNPC-223ENST00000556142 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-223ENST00000556142 UBR1Q8IWV7 1749 aa12.97□□□□□ -0.33
HNRNPC-223ENST00000556142 YTHDC2Q9H6S0 1430 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-223ENST00000556142 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
HNRNPC-223ENST00000556142 NRXN3Q9Y4C0 1643 aa12.96□□□□□ -0.33
HNRNPC-223ENST00000556142 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
HNRNPC-223ENST00000556142 SETD1AO15047 1707 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-223ENST00000556142 MYOM1P52179 1685 aa12.96□□□□□ -0.33
HNRNPC-223ENST00000556142 QRICH2Q9H0J4 1663 aa12.95□□□□□ -0.34
HNRNPC-223ENST00000556142 STRCP1A6NGW2 1772 aa12.95□□□□□ -0.34
HNRNPC-223ENST00000556142 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-223ENST00000556142 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
HNRNPC-223ENST00000556142 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
HNRNPC-223ENST00000556142 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-223ENST00000556142 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
HNRNPC-223ENST00000556142 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
HNRNPC-223ENST00000556142 LRPPRCP42704 1394 aaKnown RBP12.93□□□□□ -0.34
HNRNPC-223ENST00000556142 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
HNRNPC-223ENST00000556142 ABCC11Q96J66 1382 aa12.92□□□□□ -0.34
HNRNPC-223ENST00000556142 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
HNRNPC-223ENST00000556142 LTKP29376 864 aa12.91□□□□□ -0.34
HNRNPC-223ENST00000556142 STK26Q9P289 416 aa12.91□□□□□ -0.34
HNRNPC-223ENST00000556142 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-223ENST00000556142 SLIT1O75093 1534 aa12.91□□□□□ -0.34
HNRNPC-223ENST00000556142 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
HNRNPC-223ENST00000556142 CARD14Q9BXL6 1004 aa12.9□□□□□ -0.34
HNRNPC-223ENST00000556142 METP08581 1390 aa12.9□□□□□ -0.34
HNRNPC-223ENST00000556142 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
HNRNPC-223ENST00000556142 PLEKHG1Q9ULL1 1385 aa12.9□□□□□ -0.34
HNRNPC-223ENST00000556142 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.35
HNRNPC-223ENST00000556142 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.35
HNRNPC-223ENST00000556142 SIRT1Q96EB6 747 aa12.9□□□□□ -0.35
HNRNPC-223ENST00000556142 PRAM1Q96QH2 718 aa12.9□□□□□ -0.35
HNRNPC-223ENST00000556142 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
HNRNPC-223ENST00000556142 CC2D1BQ5T0F9 858 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-223ENST00000556142 KNSTRNQ9Y448 316 aa12.88□□□□□ -0.35
HNRNPC-223ENST00000556142 TECPR2O15040 1411 aa12.88□□□□□ -0.35
HNRNPC-223ENST00000556142 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
HNRNPC-223ENST00000556142 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
HNRNPC-223ENST00000556142 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
HNRNPC-223ENST00000556142 PLEKHH1Q9ULM0 1364 aa12.87□□□□□ -0.35
HNRNPC-223ENST00000556142 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
HNRNPC-223ENST00000556142 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
HNRNPC-223ENST00000556142 SAFB2Q14151 953 aaKnown RBP eCLIP12.86□□□□□ -0.35
HNRNPC-223ENST00000556142 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
HNRNPC-223ENST00000556142 POGKQ9P215 609 aa12.86□□□□□ -0.35
HNRNPC-223ENST00000556142 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
HNRNPC-223ENST00000556142 TMC1Q8TDI8 760 aa12.85□□□□□ -0.35
HNRNPC-223ENST00000556142 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
HNRNPC-223ENST00000556142 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
HNRNPC-223ENST00000556142 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-223ENST00000556142 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
HNRNPC-223ENST00000556142 MINK1Q8N4C8 1332 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-223ENST00000556142 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-223ENST00000556142 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
HNRNPC-223ENST00000556142 EID1Q9Y6B2 187 aa12.83□□□□□ -0.36
HNRNPC-223ENST00000556142 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
HNRNPC-223ENST00000556142 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
HNRNPC-223ENST00000556142 TBX22Q9Y458 520 aa12.82□□□□□ -0.36
HNRNPC-223ENST00000556142 ATAD2Q6PL18 1390 aa12.82□□□□□ -0.36
HNRNPC-223ENST00000556142 ANKRD36BQ8N2N9 1353 aa12.82□□□□□ -0.36
HNRNPC-223ENST00000556142 PTPRUQ92729 1446 aa12.82□□□□□ -0.36
HNRNPC-223ENST00000556142 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
HNRNPC-223ENST00000556142 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
HNRNPC-223ENST00000556142 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
HNRNPC-223ENST00000556142 INSRP06213 1382 aa12.8□□□□□ -0.36
HNRNPC-223ENST00000556142 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-223ENST00000556142 ROBO2Q9HCK4 1378 aa12.8□□□□□ -0.36
HNRNPC-223ENST00000556142 ROBO1Q9Y6N7 1651 aa12.79□□□□□ -0.36
HNRNPC-223ENST00000556142 TMEM94Q12767 1356 aa12.79□□□□□ -0.36
HNRNPC-223ENST00000556142 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
HNRNPC-223ENST00000556142 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-223ENST00000556142 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-223ENST00000556142 BCANQ96GW7 911 aa12.78□□□□□ -0.36
HNRNPC-223ENST00000556142 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
HNRNPC-223ENST00000556142 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
HNRNPC-223ENST00000556142 DIP2AQ14689 1571 aa12.77□□□□□ -0.36
HNRNPC-223ENST00000556142 KCNA6P17658 529 aa12.75□□□□□ -0.37
HNRNPC-223ENST00000556142 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-223ENST00000556142 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
HNRNPC-223ENST00000556142 AMOTL2Q9Y2J4 779 aa12.75□□□□□ -0.37
HNRNPC-223ENST00000556142 NSD2O96028 1365 aa12.75□□□□□ -0.37
HNRNPC-223ENST00000556142 JCADQ9P266 1359 aa12.75□□□□□ -0.37
HNRNPC-223ENST00000556142 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-223ENST00000556142 CGNL1Q0VF96 1302 aa12.74□□□□□ -0.37
HNRNPC-223ENST00000556142 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
HNRNPC-223ENST00000556142 PTCH1Q13635 1447 aa12.74□□□□□ -0.37
HNRNPC-223ENST00000556142 ADGRB2O60241 1585 aa12.74□□□□□ -0.37
HNRNPC-223ENST00000556142 PIK3R4Q99570 1358 aa12.74□□□□□ -0.37
HNRNPC-223ENST00000556142 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-223ENST00000556142 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
HNRNPC-223ENST00000556142 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-223ENST00000556142 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-223ENST00000556142 ATP7BP35670 1465 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms