RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 APBB1O00213 710 aa21.61■■□□□ 1.05
PPP4R3A-208ENST00000555462 TRIM27P14373 513 aa21.61■■□□□ 1.05
PPP4R3A-208ENST00000555462 GOLGA6L3A6NEY3 463 aa21.61■■□□□ 1.05
PPP4R3A-208ENST00000555462 ZKSCAN2Q63HK3 967 aa21.61■■□□□ 1.05
PPP4R3A-208ENST00000555462 PIK3C2GO75747 1445 aa21.61■■□□□ 1.05
PPP4R3A-208ENST00000555462 ARHGEF5Q12774 1597 aa21.61■■□□□ 1.05
PPP4R3A-208ENST00000555462 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
PPP4R3A-208ENST00000555462 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
PPP4R3A-208ENST00000555462 MCM4P33991 863 aa21.59■■□□□ 1.05
PPP4R3A-208ENST00000555462 TMEM57Q8N5G2 664 aa21.59■■□□□ 1.05
PPP4R3A-208ENST00000555462 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
PPP4R3A-208ENST00000555462 TRAK2O60296 914 aa21.59■■□□□ 1.05
PPP4R3A-208ENST00000555462 ATP10AO60312 1499 aa21.58■■□□□ 1.04
PPP4R3A-208ENST00000555462 MINK1Q8N4C8 1332 aaPredicted RBP21.57■■□□□ 1.04
PPP4R3A-208ENST00000555462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.57■■□□□ 1.042e-6■■■□□ 14.9
PPP4R3A-208ENST00000555462 FAM43AQ8N2R8 423 aa21.57■■□□□ 1.04
PPP4R3A-208ENST00000555462 ERVK-7P63135 1459 aa21.56■■□□□ 1.04
PPP4R3A-208ENST00000555462 HMOX1P09601 288 aa21.55■■□□□ 1.04
PPP4R3A-208ENST00000555462 RIPK4P57078 832 aa21.55■■□□□ 1.04
PPP4R3A-208ENST00000555462 MYH16Q9H6N6 1097 aa21.55■■□□□ 1.04
PPP4R3A-208ENST00000555462 NOS1P29475 1434 aa21.55■■□□□ 1.04
PPP4R3A-208ENST00000555462 ZBTB7CA1YPR0 619 aa21.54■■□□□ 1.04
PPP4R3A-208ENST00000555462 KANK1Q14678 1352 aa21.54■■□□□ 1.04
PPP4R3A-208ENST00000555462 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
PPP4R3A-208ENST00000555462 TPRNQ4KMQ1 711 aa21.53■■□□□ 1.04
PPP4R3A-208ENST00000555462 ANKRD45Q5TZF3 282 aa21.53■■□□□ 1.04
PPP4R3A-208ENST00000555462 HSCBQ8IWL3 235 aa21.53■■□□□ 1.04
PPP4R3A-208ENST00000555462 HSP90AB1P08238 724 aaKnown RBP21.52■■□□□ 1.04
PPP4R3A-208ENST00000555462 DUOX2Q9NRD8 1548 aa21.52■■□□□ 1.04
PPP4R3A-208ENST00000555462 MAST1Q9Y2H9 1570 aa21.51■■□□□ 1.03
PPP4R3A-208ENST00000555462 CD2BP2O95400 341 aaKnown RBP21.5■■□□□ 1.03
PPP4R3A-208ENST00000555462 EIF2AK4Q9P2K8 1649 aaKnown RBP21.5■■□□□ 1.03
PPP4R3A-208ENST00000555462 NCLP19338 710 aaKnown RBP21.49■■□□□ 1.03
PPP4R3A-208ENST00000555462 TMPOP42166 694 aaKnown RBP21.49■■□□□ 1.03
PPP4R3A-208ENST00000555462 L1TD1Q5T7N2 865 aaKnown RBP21.49■■□□□ 1.03
PPP4R3A-208ENST00000555462 FOXD4L5Q5VV16 416 aaPredicted RBP21.49■■□□□ 1.03
PPP4R3A-208ENST00000555462 FOXD4L4Q8WXT5 416 aaPredicted RBP21.49■■□□□ 1.03
PPP4R3A-208ENST00000555462 MADDQ8WXG6 1647 aa21.48■■□□□ 1.03
PPP4R3A-208ENST00000555462 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
PPP4R3A-208ENST00000555462 PLCH2O75038 1416 aa21.48■■□□□ 1.03
PPP4R3A-208ENST00000555462 ATAD2Q6PL18 1390 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 ATF7IPQ6VMQ6 1270 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 WDR63Q8IWG1 891 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 CHMP5Q9NZZ3 219 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 NLRP1Q9C000 1473 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 CLTCL1P53675 1640 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 IQGAP3Q86VI3 1631 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 UNC13BO14795 1591 aa21.47■■□□□ 1.03
PPP4R3A-208ENST00000555462 CHAMP1Q96JM3 812 aa21.46■■□□□ 1.03
PPP4R3A-208ENST00000555462 ARID3AQ99856 593 aa21.46■■□□□ 1.03
PPP4R3A-208ENST00000555462 POLR3AO14802 1390 aaPredicted RBP21.45■■□□□ 1.02
PPP4R3A-208ENST00000555462 RSPH6AQ9H0K4 717 aa21.45■■□□□ 1.02
PPP4R3A-208ENST00000555462 TRIM35Q9UPQ4 493 aa21.45■■□□□ 1.02
PPP4R3A-208ENST00000555462 GAS2L3Q86XJ1 694 aa21.44■■□□□ 1.02
PPP4R3A-208ENST00000555462 SOX12O15370 315 aa21.44■■□□□ 1.02
PPP4R3A-208ENST00000555462 PTPRTO14522 1441 aa21.43■■□□□ 1.02
PPP4R3A-208ENST00000555462 TSPYL6Q8N831 410 aa21.43■■□□□ 1.02
PPP4R3A-208ENST00000555462 TNPO1Q92973 898 aaKnown RBP21.43■■□□□ 1.02
PPP4R3A-208ENST00000555462 SYNMO15061 1565 aa21.43■■□□□ 1.02
PPP4R3A-208ENST00000555462 DCTN1Q14203 1278 aa21.42■■□□□ 1.02
PPP4R3A-208ENST00000555462 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
PPP4R3A-208ENST00000555462 DDX19BQ9UMR2 479 aa21.41■■□□□ 1.02
PPP4R3A-208ENST00000555462 RAPGEF3O95398 923 aa21.39■■□□□ 1.02
PPP4R3A-208ENST00000555462 PRKAR2BP31323 418 aa21.39■■□□□ 1.02
PPP4R3A-208ENST00000555462 FOXD4L6Q3SYB3 417 aaPredicted RBP21.39■■□□□ 1.02
PPP4R3A-208ENST00000555462 FOXD4L3Q6VB84 417 aaPredicted RBP21.39■■□□□ 1.02
PPP4R3A-208ENST00000555462 GRPEL1Q9HAV7 217 aa21.39■■□□□ 1.02
PPP4R3A-208ENST00000555462 ERBB4Q15303 1308 aa21.39■■□□□ 1.01
PPP4R3A-208ENST00000555462 MYOM1P52179 1685 aa21.38■■□□□ 1.01
PPP4R3A-208ENST00000555462 SSFA2P28290 1259 aa21.38■■□□□ 1.01
PPP4R3A-208ENST00000555462 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
PPP4R3A-208ENST00000555462 PHACTR3Q96KR7 559 aa21.38■■□□□ 1.01
PPP4R3A-208ENST00000555462 NPC1L1Q9UHC9 1359 aa21.38■■□□□ 1.01
PPP4R3A-208ENST00000555462 FAM83GA6ND36 823 aa21.38■■□□□ 1.01
PPP4R3A-208ENST00000555462 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
PPP4R3A-208ENST00000555462 ZRANB1Q9UGI0 708 aa21.37■■□□□ 1.01
PPP4R3A-208ENST00000555462 IQGAP1P46940 1657 aa21.37■■□□□ 1.01
PPP4R3A-208ENST00000555462 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 NOL8Q76FK4 1167 aaKnown RBP21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 CHD1LQ86WJ1 897 aa21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 TRIM44Q96DX7 344 aaPredicted RBP21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 C14orf93Q9H972 538 aaKnown RBP21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 PRAM1Q96QH2 718 aa21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 CABP1Q9NZU7 370 aa21.36■■□□□ 1.01
PPP4R3A-208ENST00000555462 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
PPP4R3A-208ENST00000555462 PHF23Q9BUL5 403 aaPredicted RBP21.35■■□□□ 1.01
PPP4R3A-208ENST00000555462 ZBTB40Q9NUA8 1239 aa21.35■■□□□ 1.01
PPP4R3A-208ENST00000555462 FYB1O15117 783 aa21.35■■□□□ 1.01
PPP4R3A-208ENST00000555462 RNF17Q9BXT8 1623 aaKnown RBP21.35■■□□□ 1.01
PPP4R3A-208ENST00000555462 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
PPP4R3A-208ENST00000555462 MPNDQ8N594 471 aa21.34■■□□□ 1.01
PPP4R3A-208ENST00000555462 GAS2L2Q8NHY3 880 aa21.33■■□□□ 1
PPP4R3A-208ENST00000555462 LAMC1P11047 1609 aa21.32■■□□□ 1
PPP4R3A-208ENST00000555462 VSIG10Q8N0Z9 540 aa21.32■■□□□ 1
PPP4R3A-208ENST00000555462 OTUD7AQ8TE49 926 aaPredicted RBP21.32■■□□□ 1
PPP4R3A-208ENST00000555462 UBE2Q2Q8WVN8 375 aa21.32■■□□□ 1
PPP4R3A-208ENST00000555462 NCKAP5LQ9HCH0 1330 aa21.32■■□□□ 1
PPP4R3A-208ENST00000555462 SMARCA5O60264 1052 aaPredicted RBP21.32■■□□□ 1
PPP4R3A-208ENST00000555462 PKP1Q13835 747 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms