RNA–Protein interactions for RNA: ENST00000553059.1

NTN4-207, Transcript of netrin 4, humanhuman

TSL 1 (best) BASIC

Gene NTN4, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTN4-207ENST00000553059 AMOTL2Q9Y2J4 779 aa28.59■■■□□ 2.17
NTN4-207ENST00000553059 PANK3Q9H999 370 aa28.59■■■□□ 2.17
NTN4-207ENST00000553059 PIK3R4Q99570 1358 aa28.58■■■□□ 2.17
NTN4-207ENST00000553059 PUS7Q96PZ0 661 aaKnown RBP28.56■■■□□ 2.16
NTN4-207ENST00000553059 CABP2Q9NPB3 220 aa28.55■■■□□ 2.16
NTN4-207ENST00000553059 XRN1Q8IZH2 1706 aaKnown RBP28.55■■■□□ 2.16
NTN4-207ENST00000553059 SRPK2P78362 688 aaKnown RBP28.55■■■□□ 2.16
NTN4-207ENST00000553059 HSPA2P54652 639 aa28.54■■■□□ 2.16
NTN4-207ENST00000553059 PTCH1Q13635 1447 aa28.54■■■□□ 2.16
NTN4-207ENST00000553059 LMTK3Q96Q04 1460 aa28.53■■■□□ 2.16
NTN4-207ENST00000553059 PER1O15534 1290 aaPredicted RBP28.52■■■□□ 2.16
NTN4-207ENST00000553059 PRKRIP1Q9H875 184 aaPredicted RBP28.52■■■□□ 2.16
NTN4-207ENST00000553059 CDK19Q9BWU1 502 aa28.51■■■□□ 2.15
NTN4-207ENST00000553059 CNGB1Q14028 1251 aaPredicted RBP28.5■■■□□ 2.15
NTN4-207ENST00000553059 TMC1Q8TDI8 760 aa28.5■■■□□ 2.15
NTN4-207ENST00000553059 KCNA6P17658 529 aa28.49■■■□□ 2.15
NTN4-207ENST00000553059 SLC12A5Q9H2X9 1139 aa28.48■■■□□ 2.15
NTN4-207ENST00000553059 CHD2O14647 1828 aaKnown RBP28.47■■■□□ 2.15
NTN4-207ENST00000553059 ATAD2Q6PL18 1390 aa28.47■■■□□ 2.15
NTN4-207ENST00000553059 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.47■■■□□ 2.15
NTN4-207ENST00000553059 CCER2I3L3R5 266 aa28.46■■■□□ 2.15
NTN4-207ENST00000553059 WASLO00401 505 aaPredicted RBP28.46■■■□□ 2.15
NTN4-207ENST00000553059 ADGRB2O60241 1585 aa28.44■■■□□ 2.14
NTN4-207ENST00000553059 KNSTRNQ9Y448 316 aa28.43■■■□□ 2.14
NTN4-207ENST00000553059 NINLQ9Y2I6 1382 aa28.42■■■□□ 2.14
NTN4-207ENST00000553059 KTN1Q86UP2 1357 aaKnown RBP28.4■■■□□ 2.14
NTN4-207ENST00000553059 CARD14Q9BXL6 1004 aa28.39■■■□□ 2.13
NTN4-207ENST00000553059 CC2D1BQ5T0F9 858 aaKnown RBP28.38■■■□□ 2.13
NTN4-207ENST00000553059 ANKRD36BQ8N2N9 1353 aa28.37■■■□□ 2.13
NTN4-207ENST00000553059 NWD1Q149M9 1564 aa28.36■■■□□ 2.13
NTN4-207ENST00000553059 RALBP1Q15311 655 aa28.35■■■□□ 2.13
NTN4-207ENST00000553059 AMER1Q5JTC6 1135 aaPredicted RBP28.35■■■□□ 2.13
NTN4-207ENST00000553059 NSD3Q9BZ95 1437 aa28.34■■■□□ 2.13
NTN4-207ENST00000553059 STRCQ7RTU9 1775 aa28.34■■■□□ 2.13
NTN4-207ENST00000553059 CABP1Q9NZU7 370 aa28.34■■■□□ 2.13
NTN4-207ENST00000553059 PARD3Q8TEW0 1356 aa28.34■■■□□ 2.13
NTN4-207ENST00000553059 NUDT16Q96DE0 195 aaKnown RBP28.33■■■□□ 2.13
NTN4-207ENST00000553059 ATP7BP35670 1465 aa28.32■■■□□ 2.12
NTN4-207ENST00000553059 A0A1W2PP64 1363 aa28.32■■■□□ 2.12
NTN4-207ENST00000553059 TERF2IPQ9NYB0 399 aa28.32■■■□□ 2.12
NTN4-207ENST00000553059 CD163L1Q9NR16 1453 aa28.3■■■□□ 2.12
NTN4-207ENST00000553059 PPIP5K1Q6PFW1 1433 aa28.3■■■□□ 2.12
NTN4-207ENST00000553059 NPC1L1Q9UHC9 1359 aa28.3■■■□□ 2.12
NTN4-207ENST00000553059 PRR36Q9H6K5 1346 aa28.3■■■□□ 2.12
NTN4-207ENST00000553059 RBM33Q96EV2 1170 aaKnown RBP28.29■■■□□ 2.12
NTN4-207ENST00000553059 YTHDC1Q96MU7 727 aaKnown RBP28.29■■■□□ 2.12
NTN4-207ENST00000553059 CCDC61Q9Y6R9 512 aa28.29■■■□□ 2.12
NTN4-207ENST00000553059 CCDC184Q52MB2 194 aa28.28■■■□□ 2.12
NTN4-207ENST00000553059 NALCNQ8IZF0 1738 aa28.28■■■□□ 2.12
NTN4-207ENST00000553059 MYBBP1AQ9BQG0 1328 aaKnown RBP28.28■■■□□ 2.12
NTN4-207ENST00000553059 NUTM2FA1L443 756 aa28.27■■■□□ 2.12
NTN4-207ENST00000553059 HDGFL2Q7Z4V5 671 aaPredicted RBP28.27■■■□□ 2.12
NTN4-207ENST00000553059 NKTRP30414 1462 aaKnown RBP28.26■■■□□ 2.11
NTN4-207ENST00000553059 USP32Q8NFA0 1604 aa28.26■■■□□ 2.11
NTN4-207ENST00000553059 MRS2Q9HD23 443 aa28.25■■■□□ 2.11
NTN4-207ENST00000553059 ADGRL3Q9HAR2 1447 aa28.24■■■□□ 2.11
NTN4-207ENST00000553059 TOPAZ1Q8N9V7 1692 aa28.23■■■□□ 2.11
NTN4-207ENST00000553059 CGNL1Q0VF96 1302 aa28.23■■■□□ 2.11
NTN4-207ENST00000553059 CDC42BPGQ6DT37 1551 aa28.23■■■□□ 2.11
NTN4-207ENST00000553059 PROSER2Q86WR7 435 aaPredicted RBP28.22■■■□□ 2.11
NTN4-207ENST00000553059 C14orf37Q86TY3 774 aa28.21■■■□□ 2.11
NTN4-207ENST00000553059 STRCP1A6NGW2 1772 aa28.21■■■□□ 2.11
NTN4-207ENST00000553059 FMN2Q9NZ56 1722 aa28.2■■■□□ 2.11
NTN4-207ENST00000553059 CPSF1Q10570 1443 aaKnown RBP28.2■■■□□ 2.1
NTN4-207ENST00000553059 NLRP13Q86W25 1043 aa28.18■■■□□ 2.1
NTN4-207ENST00000553059 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
NTN4-207ENST00000553059 ITSN1Q15811 1721 aa28.17■■■□□ 2.1
NTN4-207ENST00000553059 BRD4O60885 1362 aaPredicted RBP28.16■■■□□ 2.1
NTN4-207ENST00000553059 NSD2O96028 1365 aa28.15■■■□□ 2.1
NTN4-207ENST00000553059 PLEKHG3A1L390 1219 aa28.15■■■□□ 2.1
NTN4-207ENST00000553059 RGPD8O14715 1765 aaPredicted RBP28.14■■■□□ 2.1
NTN4-207ENST00000553059 AKAP12Q02952 1782 aa28.14■■■□□ 2.09
NTN4-207ENST00000553059 MON2Q7Z3U7 1717 aa28.13■■■□□ 2.09
NTN4-207ENST00000553059 PPP2R1AP30153 589 aa28.13■■■□□ 2.09
NTN4-207ENST00000553059 MORC1Q86VD1 984 aa28.13■■■□□ 2.09
NTN4-207ENST00000553059 EDC4Q6P2E9 1401 aaKnown RBP28.12■■■□□ 2.09
NTN4-207ENST00000553059 TMEM94Q12767 1356 aa28.12■■■□□ 2.09
NTN4-207ENST00000553059 ACEP12821 1306 aa28.12■■■□□ 2.09
NTN4-207ENST00000553059 ZNF692Q9BU19 519 aaPredicted RBP28.11■■■□□ 2.09
NTN4-207ENST00000553059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.1■■■□□ 2.09
NTN4-207ENST00000553059 FYB1O15117 783 aa28.09■■■□□ 2.09
NTN4-207ENST00000553059 PMFBP1Q8TBY8 1022 aa28.09■■■□□ 2.09
NTN4-207ENST00000553059 DMRT2Q9Y5R5 561 aa28.09■■■□□ 2.09
NTN4-207ENST00000553059 GGNBP2Q9H3C7 697 aa28.08■■■□□ 2.09
NTN4-207ENST00000553059 ZNF335Q9H4Z2 1342 aaPredicted RBP28.08■■■□□ 2.09
NTN4-207ENST00000553059 KIF20BQ96Q89 1820 aa28.08■■■□□ 2.09
NTN4-207ENST00000553059 FAM9BQ8IZU0 186 aa28.08■■■□□ 2.09
NTN4-207ENST00000553059 C19orf44Q9H6X5 657 aa28.08■■■□□ 2.09
NTN4-207ENST00000553059 NCOA3Q9Y6Q9 1424 aa28.07■■■□□ 2.08
NTN4-207ENST00000553059 POLR3AO14802 1390 aaPredicted RBP28.05■■■□□ 2.08
NTN4-207ENST00000553059 TNNT2P45379 298 aaPredicted RBP28.05■■■□□ 2.08
NTN4-207ENST00000553059 NGDNQ8NEJ9 315 aaKnown RBP28.05■■■□□ 2.08
NTN4-207ENST00000553059 ANKRD26Q9UPS8 1709 aa28.05■■■□□ 2.08
NTN4-207ENST00000553059 USP6P35125 1406 aa28.05■■■□□ 2.08
NTN4-207ENST00000553059 NRKQ7Z2Y5 1582 aa28.03■■■□□ 2.08
NTN4-207ENST00000553059 PNISRQ8TF01 805 aaKnown RBP28.03■■■□□ 2.08
NTN4-207ENST00000553059 NME9Q86XW9 330 aa28.01■■■□□ 2.07
NTN4-207ENST00000553059 LRRC7Q96NW7 1537 aa28■■■□□ 2.07
NTN4-207ENST00000553059 PHF8Q9UPP1 1060 aa28■■■□□ 2.07
NTN4-207ENST00000553059 ESCO1Q5FWF5 840 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms