RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 CCDC144AA2RUR9 1427 aa20.45■□□□□ 0.86
CNOT2-220ENST00000549750 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
CNOT2-220ENST00000549750 FNBP4Q8N3X1 1017 aaPredicted RBP20.44■□□□□ 0.86
CNOT2-220ENST00000549750 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
CNOT2-220ENST00000549750 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
CNOT2-220ENST00000549750 EP400Q96L91 3159 aa20.44■□□□□ 0.86
CNOT2-220ENST00000549750 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
CNOT2-220ENST00000549750 LAMC1P11047 1609 aa20.39■□□□□ 0.86
CNOT2-220ENST00000549750 ATRNO75882 1429 aa20.39■□□□□ 0.85
CNOT2-220ENST00000549750 ANKRD30BQ9BXX2 1392 aa20.39■□□□□ 0.85
CNOT2-220ENST00000549750 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
CNOT2-220ENST00000549750 C1orf167Q5SNV9 1468 aa20.37■□□□□ 0.85
CNOT2-220ENST00000549750 TECPR2O15040 1411 aa20.36■□□□□ 0.85
CNOT2-220ENST00000549750 ADGRF5Q8IZF2 1346 aa20.35■□□□□ 0.85
CNOT2-220ENST00000549750 ORAI2Q96SN7 254 aa20.35■□□□□ 0.85
CNOT2-220ENST00000549750 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
CNOT2-220ENST00000549750 CDC42BPGQ6DT37 1551 aa20.34■□□□□ 0.85
CNOT2-220ENST00000549750 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.85
CNOT2-220ENST00000549750 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
CNOT2-220ENST00000549750 LRPPRCP42704 1394 aaKnown RBP20.31■□□□□ 0.84
CNOT2-220ENST00000549750 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
CNOT2-220ENST00000549750 RGL3Q3MIN7 710 aa20.3■□□□□ 0.84
CNOT2-220ENST00000549750 ABCC11Q96J66 1382 aa20.3■□□□□ 0.84
CNOT2-220ENST00000549750 RAB3GAP2Q9H2M9 1393 aa20.3■□□□□ 0.84
CNOT2-220ENST00000549750 BCL9LQ86UU0 1499 aa20.3■□□□□ 0.84
CNOT2-220ENST00000549750 MYOM2P54296 1465 aa20.29■□□□□ 0.84
CNOT2-220ENST00000549750 BLMP54132 1417 aaPredicted RBP20.28■□□□□ 0.84
CNOT2-220ENST00000549750 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
CNOT2-220ENST00000549750 DEFB132Q7Z7B7 95 aa20.25■□□□□ 0.83
CNOT2-220ENST00000549750 COL22A1Q8NFW1 1626 aaPredicted RBP20.24■□□□□ 0.83
CNOT2-220ENST00000549750 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
CNOT2-220ENST00000549750 HRCP23327 699 aa20.23■□□□□ 0.83
CNOT2-220ENST00000549750 SIRT1Q96EB6 747 aa20.23■□□□□ 0.83
CNOT2-220ENST00000549750 C14orf93Q9H972 538 aaKnown RBP20.23■□□□□ 0.83
CNOT2-220ENST00000549750 NPHP3Q7Z494 1330 aa20.23■□□□□ 0.83
CNOT2-220ENST00000549750 UNC5CLQ8IV45 518 aa20.22■□□□□ 0.83
CNOT2-220ENST00000549750 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
CNOT2-220ENST00000549750 FMN2Q9NZ56 1722 aa20.2■□□□□ 0.82
CNOT2-220ENST00000549750 TMEM132EQ6IEE7 984 aa20.2■□□□□ 0.82
CNOT2-220ENST00000549750 STK26Q9P289 416 aa20.19■□□□□ 0.82
CNOT2-220ENST00000549750 PLEKHH1Q9ULM0 1364 aa20.19■□□□□ 0.82
CNOT2-220ENST00000549750 PXDNQ92626 1479 aa20.18■□□□□ 0.82
CNOT2-220ENST00000549750 WAPLQ7Z5K2 1190 aa20.18■□□□□ 0.82
CNOT2-220ENST00000549750 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
CNOT2-220ENST00000549750 LRP5O75197 1615 aa20.17■□□□□ 0.82
CNOT2-220ENST00000549750 FOXO3O43524 673 aa20.17■□□□□ 0.82
CNOT2-220ENST00000549750 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
CNOT2-220ENST00000549750 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
CNOT2-220ENST00000549750 DHX57Q6P158 1386 aaKnown RBP20.16■□□□□ 0.82
CNOT2-220ENST00000549750 KIF1AQ12756 1690 aa20.16■□□□□ 0.82
CNOT2-220ENST00000549750 SEPT12Q8IYM1 358 aa20.15■□□□□ 0.82
CNOT2-220ENST00000549750 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
CNOT2-220ENST00000549750 ADGRB1O14514 1584 aa20.14■□□□□ 0.81
CNOT2-220ENST00000549750 CFAP70Q5T0N1 1121 aa20.14■□□□□ 0.81
CNOT2-220ENST00000549750 PSDA5PKW4 1024 aaPredicted RBP20.13■□□□□ 0.81
CNOT2-220ENST00000549750 STAC3Q96MF2 364 aa20.13■□□□□ 0.81
CNOT2-220ENST00000549750 GLI3P10071 1580 aa20.12■□□□□ 0.81
CNOT2-220ENST00000549750 SLIT2O94813 1529 aa20.12■□□□□ 0.81
CNOT2-220ENST00000549750 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.12■□□□□ 0.81
CNOT2-220ENST00000549750 ADGRB2O60241 1585 aa20.1■□□□□ 0.81
CNOT2-220ENST00000549750 KRT27Q7Z3Y8 459 aa20.1■□□□□ 0.81
CNOT2-220ENST00000549750 ONECUT3O60422 494 aaPredicted RBP20.09■□□□□ 0.81
CNOT2-220ENST00000549750 BAG6P46379 1132 aa20.09■□□□□ 0.81
CNOT2-220ENST00000549750 VPS72Q15906 364 aa20.09■□□□□ 0.81
CNOT2-220ENST00000549750 BRWD3Q6RI45 1802 aa20.09■□□□□ 0.81
CNOT2-220ENST00000549750 SPATA31A3Q5VYP0 1347 aa20.07■□□□□ 0.8
CNOT2-220ENST00000549750 RGPD8O14715 1765 aaPredicted RBP20.07■□□□□ 0.8
CNOT2-220ENST00000549750 ANKARQ7Z5J8 1434 aa20.06■□□□□ 0.8
CNOT2-220ENST00000549750 PRAM1Q96QH2 718 aa20.06■□□□□ 0.8
CNOT2-220ENST00000549750 CCDC9Q9Y3X0 531 aaKnown RBP20.06■□□□□ 0.8
CNOT2-220ENST00000549750 NUTM2FA1L443 756 aa20.05■□□□□ 0.8
CNOT2-220ENST00000549750 HAP1P54257 671 aaPredicted RBP20.05■□□□□ 0.8
CNOT2-220ENST00000549750 USP32Q8NFA0 1604 aa20.03■□□□□ 0.8
CNOT2-220ENST00000549750 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
CNOT2-220ENST00000549750 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.8
CNOT2-220ENST00000549750 PHF8Q9UPP1 1060 aa20.01■□□□□ 0.79
CNOT2-220ENST00000549750 A0A0G2JS52 829 aa20■□□□□ 0.79
CNOT2-220ENST00000549750 MYT1Q01538 1121 aa20■□□□□ 0.79
CNOT2-220ENST00000549750 POGKQ9P215 609 aa20■□□□□ 0.79
CNOT2-220ENST00000549750 TNS3Q68CZ2 1445 aa20■□□□□ 0.79
CNOT2-220ENST00000549750 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
CNOT2-220ENST00000549750 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
CNOT2-220ENST00000549750 EN1Q05925 392 aaPredicted RBP19.99■□□□□ 0.79
CNOT2-220ENST00000549750 R3HDM1Q15032 1099 aaKnown RBP19.99■□□□□ 0.79
CNOT2-220ENST00000549750 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
CNOT2-220ENST00000549750 CABLES1Q8TDN4 633 aa19.98■□□□□ 0.79
CNOT2-220ENST00000549750 KDM2AQ9Y2K7 1162 aa19.98■□□□□ 0.79
CNOT2-220ENST00000549750 ARHGEF28Q8N1W1 1705 aaKnown RBP19.98■□□□□ 0.79
CNOT2-220ENST00000549750 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
CNOT2-220ENST00000549750 PSME1Q06323 249 aa19.97■□□□□ 0.79
CNOT2-220ENST00000549750 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
CNOT2-220ENST00000549750 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
CNOT2-220ENST00000549750 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
CNOT2-220ENST00000549750 YY1P25490 414 aa19.95■□□□□ 0.78
CNOT2-220ENST00000549750 FAM98CQ17RN3 349 aaKnown RBP19.95■□□□□ 0.78
CNOT2-220ENST00000549750 ABCA3Q99758 1704 aa19.95■□□□□ 0.78
CNOT2-220ENST00000549750 TRPM3Q9HCF6 1732 aaPredicted RBP19.94■□□□□ 0.78
CNOT2-220ENST00000549750 FAM83GA6ND36 823 aa19.94■□□□□ 0.78
CNOT2-220ENST00000549750 ARHGEF10O15013 1369 aa19.94■□□□□ 0.78
CNOT2-220ENST00000549750 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms