RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 SCAPERQ9BY12 1400 aa10.02□□□□□ -0.8
DDX47-212ENST00000545038 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.81
DDX47-212ENST00000545038 CD2BP2O95400 341 aaKnown RBP10.02□□□□□ -0.81
DDX47-212ENST00000545038 ERVK-7P63135 1459 aa10.01□□□□□ -0.81
DDX47-212ENST00000545038 MRC2Q9UBG0 1479 aa10.01□□□□□ -0.81
DDX47-212ENST00000545038 MAST1Q9Y2H9 1570 aa10.01□□□□□ -0.81
DDX47-212ENST00000545038 JPH4Q96JJ6 628 aa10.01□□□□□ -0.81
DDX47-212ENST00000545038 RWDD1Q9H446 243 aaPredicted RBP10.01□□□□□ -0.81
DDX47-212ENST00000545038 RIPK4P57078 832 aa10.01□□□□□ -0.81
DDX47-212ENST00000545038 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
DDX47-212ENST00000545038 KIAA1211Q6ZU35 1233 aa10.01□□□□□ -0.81
DDX47-212ENST00000545038 TCP11L2Q8N4U5 519 aa10.01□□□□□ -0.81
DDX47-212ENST00000545038 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
DDX47-212ENST00000545038 KIF2CQ99661 725 aa10□□□□□ -0.81
DDX47-212ENST00000545038 IFT140Q96RY7 1462 aa10□□□□□ -0.81
DDX47-212ENST00000545038 NGEFQ8N5V2 710 aa10□□□□□ -0.81
DDX47-212ENST00000545038 ISY1Q9ULR0 285 aaKnown RBP10□□□□□ -0.81
DDX47-212ENST00000545038 DUOX2Q9NRD8 1548 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 AAMPQ13685 434 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 CDCA8Q53HL2 280 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 HSCBQ8IWL3 235 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 SMC5Q8IY18 1101 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 PDCL3Q9H2J4 239 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 TTC37Q6PGP7 1564 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 TPM2P07951 284 aa9.99□□□□□ -0.81
DDX47-212ENST00000545038 RBM25P49756 843 aaKnown RBP9.99□□□□□ -0.81
DDX47-212ENST00000545038 TRIM44Q96DX7 344 aaPredicted RBP9.99□□□□□ -0.81
DDX47-212ENST00000545038 CARMIL2Q6F5E8 1435 aa9.98□□□□□ -0.81
DDX47-212ENST00000545038 TNNT2P45379 298 aaPredicted RBP9.98□□□□□ -0.81
DDX47-212ENST00000545038 PRDM4Q9UKN5 801 aa9.98□□□□□ -0.81
DDX47-212ENST00000545038 CLTCL1P53675 1640 aa9.98□□□□□ -0.81
DDX47-212ENST00000545038 PPP1R9BQ96SB3 815 aa9.97□□□□□ -0.81
DDX47-212ENST00000545038 FOXD4L1Q9NU39 408 aa9.97□□□□□ -0.81
DDX47-212ENST00000545038 RBM10P98175 930 aaKnown RBP9.97□□□□□ -0.81
DDX47-212ENST00000545038 SNX21Q969T3 373 aa9.97□□□□□ -0.81
DDX47-212ENST00000545038 RUNDC1Q96C34 613 aa9.97□□□□□ -0.81
DDX47-212ENST00000545038 TRIM27P14373 513 aa9.96□□□□□ -0.81
DDX47-212ENST00000545038 OFD1O75665 1012 aa9.96□□□□□ -0.82
DDX47-212ENST00000545038 HDAC1Q13547 482 aaPredicted RBP9.96□□□□□ -0.82
DDX47-212ENST00000545038 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.82
DDX47-212ENST00000545038 WDR63Q8IWG1 891 aa9.96□□□□□ -0.82
DDX47-212ENST00000545038 CHMP7Q8WUX9 453 aaPredicted RBP9.96□□□□□ -0.82
DDX47-212ENST00000545038 TSR2Q969E8 191 aaKnown RBP9.96□□□□□ -0.82
DDX47-212ENST00000545038 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
DDX47-212ENST00000545038 KANK1Q14678 1352 aa9.96□□□□□ -0.82
DDX47-212ENST00000545038 SSFA2P28290 1259 aa9.95□□□□□ -0.82
DDX47-212ENST00000545038 FBLN2P98095 1184 aa9.95□□□□□ -0.82
DDX47-212ENST00000545038 DZIP1LQ8IYY4 767 aaKnown RBP9.95□□□□□ -0.82
DDX47-212ENST00000545038 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
DDX47-212ENST00000545038 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
DDX47-212ENST00000545038 ZSCAN30Q86W11 494 aa9.95□□□□□ -0.82
DDX47-212ENST00000545038 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.95□□□□□ -0.82
DDX47-212ENST00000545038 TRPM2O94759 1503 aa9.95□□□□□ -0.82
DDX47-212ENST00000545038 NASPP49321 788 aaPredicted RBP9.94□□□□□ -0.82
DDX47-212ENST00000545038 ZKSCAN2Q63HK3 967 aa9.94□□□□□ -0.82
DDX47-212ENST00000545038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.94□□□□□ -0.82
DDX47-212ENST00000545038 CCDC173Q0VFZ6 552 aa9.94□□□□□ -0.82
DDX47-212ENST00000545038 GAS2L2Q8NHY3 880 aa9.94□□□□□ -0.82
DDX47-212ENST00000545038 CIZ1Q9ULV3 898 aaPredicted RBP9.94□□□□□ -0.82
DDX47-212ENST00000545038 ABCA6Q8N139 1617 aa9.94□□□□□ -0.82
DDX47-212ENST00000545038 KIAA1210Q9ULL0 1709 aa9.94□□□□□ -0.82
DDX47-212ENST00000545038 FTSJ3Q8IY81 847 aaKnown RBP9.93□□□□□ -0.82
DDX47-212ENST00000545038 GBP4Q96PP9 640 aa9.93□□□□□ -0.82
DDX47-212ENST00000545038 LNPKQ9C0E8 428 aa9.93□□□□□ -0.82
DDX47-212ENST00000545038 NSD3Q9BZ95 1437 aa9.93□□□□□ -0.82
DDX47-212ENST00000545038 HSP90AB1P08238 724 aaKnown RBP9.93□□□□□ -0.82
DDX47-212ENST00000545038 CALD1Q05682 793 aaKnown RBP9.93□□□□□ -0.82
DDX47-212ENST00000545038 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
DDX47-212ENST00000545038 SSH1Q8WYL5 1049 aa9.93□□□□□ -0.82
DDX47-212ENST00000545038 ZNF518AQ6AHZ1 1483 aa9.93□□□□□ -0.82
DDX47-212ENST00000545038 MTHFSP49914 203 aa9.92□□□□□ -0.82
DDX47-212ENST00000545038 ITPRIPQ8IWB1 547 aa9.92□□□□□ -0.82
DDX47-212ENST00000545038 ZBTB40Q9NUA8 1239 aa9.92□□□□□ -0.82
DDX47-212ENST00000545038 PTPRTO14522 1441 aa9.92□□□□□ -0.82
DDX47-212ENST00000545038 ADGRB2O60241 1585 aa9.92□□□□□ -0.82
DDX47-212ENST00000545038 NUCB1Q02818 461 aa9.92□□□□□ -0.82
DDX47-212ENST00000545038 TMEM57Q8N5G2 664 aa9.92□□□□□ -0.82
DDX47-212ENST00000545038 ADGRF5Q8IZF2 1346 aa9.91□□□□□ -0.82
DDX47-212ENST00000545038 EXOSC9Q06265 439 aaKnown RBP9.91□□□□□ -0.82
DDX47-212ENST00000545038 SKOR2Q2VWA4 1001 aaPredicted RBP9.91□□□□□ -0.82
DDX47-212ENST00000545038 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
DDX47-212ENST00000545038 SLC12A5Q9H2X9 1139 aa9.91□□□□□ -0.82
DDX47-212ENST00000545038 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
DDX47-212ENST00000545038 UGGT1Q9NYU2 1555 aa9.91□□□□□ -0.82
DDX47-212ENST00000545038 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.82
DDX47-212ENST00000545038 KLHL40Q2TBA0 621 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 CLEC17AQ6ZS10 378 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 SMC4Q9NTJ3 1288 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 FAM13BQ9NYF5 915 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 R3HCC1Q9Y3T6 440 aaKnown RBP9.9□□□□□ -0.82
DDX47-212ENST00000545038 CFAP74Q9C0B2 1584 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 IBTKQ9P2D0 1353 aaPredicted RBP9.9□□□□□ -0.82
DDX47-212ENST00000545038 NOS1P29475 1434 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 XPCQ01831 940 aaPredicted RBP9.9□□□□□ -0.82
DDX47-212ENST00000545038 PKP1Q13835 747 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 ATF7IPQ6VMQ6 1270 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 NOB1Q9ULX3 412 aaKnown RBP9.9□□□□□ -0.82
DDX47-212ENST00000545038 MAP3K4Q9Y6R4 1608 aa9.9□□□□□ -0.82
DDX47-212ENST00000545038 ERCC6Q03468 1493 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms