RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 DISP2A7MBM2 1401 aa5.4□□□□□ -1.55
CHD4-209ENST00000542717 MYOM2P54296 1465 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 CCDC141Q6ZP82 1450 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 MBD5Q9P267 1494 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 XPCQ01831 940 aaPredicted RBP5.39□□□□□ -1.55
CHD4-209ENST00000542717 RSPH4AQ5TD94 716 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.39□□□□□ -1.55
CHD4-209ENST00000542717 WWC3Q9ULE0 1092 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.39□□□□□ -1.55
CHD4-209ENST00000542717 MTUS2Q5JR59 1369 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 PIK3R4Q99570 1358 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 RIMS2Q9UQ26 1411 aa5.39□□□□□ -1.55
CHD4-209ENST00000542717 NRKQ7Z2Y5 1582 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 APLP1P51693 650 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 FAM196AQ6ZSG2 479 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 KLHL34Q8N239 644 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 ZNF526Q8TF50 670 aaPredicted RBP5.38□□□□□ -1.55
CHD4-209ENST00000542717 ARHGAP31Q2M1Z3 1444 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 ADGRL3Q9HAR2 1447 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 C1orf167Q5SNV9 1468 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 SLIT2O94813 1529 aa5.38□□□□□ -1.55
CHD4-209ENST00000542717 MARF1Q9Y4F3 1742 aaKnown RBP5.37□□□□□ -1.55
CHD4-209ENST00000542717 SLC52A1Q9NWF4 448 aa5.37□□□□□ -1.55
CHD4-209ENST00000542717 NPHP3Q7Z494 1330 aa5.37□□□□□ -1.55
CHD4-209ENST00000542717 KANK1Q14678 1352 aa5.37□□□□□ -1.55
CHD4-209ENST00000542717 ADGRB3O60242 1522 aa5.37□□□□□ -1.55
CHD4-209ENST00000542717 TRPM2O94759 1503 aa5.37□□□□□ -1.55
CHD4-209ENST00000542717 COL22A1Q8NFW1 1626 aaPredicted RBP5.37□□□□□ -1.55
CHD4-209ENST00000542717 UTRNP46939 3433 aa5.36□□□□□ -1.55
CHD4-209ENST00000542717 ESCO1Q5FWF5 840 aa5.36□□□□□ -1.55
CHD4-209ENST00000542717 NOS1P29475 1434 aa5.36□□□□□ -1.55
CHD4-209ENST00000542717 EHBP1L1Q8N3D4 1523 aa5.36□□□□□ -1.55
CHD4-209ENST00000542717 DLC1Q96QB1 1528 aa5.36□□□□□ -1.55
CHD4-209ENST00000542717 TNS1Q9HBL0 1735 aaKnown RBP5.35□□□□□ -1.55
CHD4-209ENST00000542717 MYOM1P52179 1685 aa5.35□□□□□ -1.55
CHD4-209ENST00000542717 FYCO1Q9BQS8 1478 aa5.35□□□□□ -1.55
CHD4-209ENST00000542717 ADAMTS13Q76LX8 1427 aa5.35□□□□□ -1.55
CHD4-209ENST00000542717 CASKIN1Q8WXD9 1431 aa5.35□□□□□ -1.55
CHD4-209ENST00000542717 PTPRUQ92729 1446 aa5.35□□□□□ -1.55
CHD4-209ENST00000542717 ATP10DQ9P241 1426 aa5.35□□□□□ -1.55
CHD4-209ENST00000542717 FOXO3O43524 673 aa5.35□□□□□ -1.55
CHD4-209ENST00000542717 SHANK3Q9BYB0 1731 aa5.34□□□□□ -1.55
CHD4-209ENST00000542717 ZFYVE9O95405 1425 aa5.34□□□□□ -1.55
CHD4-209ENST00000542717 AATKQ6ZMQ8 1374 aa5.34□□□□□ -1.55
CHD4-209ENST00000542717 PTGER2P43116 358 aa5.34□□□□□ -1.55
CHD4-209ENST00000542717 DNAJC5GQ8N7S2 189 aa5.34□□□□□ -1.55
CHD4-209ENST00000542717 BCL11BQ9C0K0 894 aaPredicted RBP5.34□□□□□ -1.55
CHD4-209ENST00000542717 PDGFDQ9GZP0 370 aaPredicted RBP5.34□□□□□ -1.55
CHD4-209ENST00000542717 NUP188Q5SRE5 1749 aa5.34□□□□□ -1.56
CHD4-209ENST00000542717 EIF2AK4Q9P2K8 1649 aaKnown RBP5.34□□□□□ -1.56
CHD4-209ENST00000542717 PDE3BQ13370 1112 aa5.33□□□□□ -1.56
CHD4-209ENST00000542717 FAM161AQ3B820 660 aa5.33□□□□□ -1.56
CHD4-209ENST00000542717 LMOD2Q6P5Q4 547 aa5.33□□□□□ -1.56
CHD4-209ENST00000542717 CABLES1Q8TDN4 633 aa5.33□□□□□ -1.56
CHD4-209ENST00000542717 ARXQ96QS3 562 aa5.33□□□□□ -1.56
CHD4-209ENST00000542717 LRPPRCP42704 1394 aaKnown RBP5.32□□□□□ -1.56
CHD4-209ENST00000542717 RREB1Q92766 1687 aa5.32□□□□□ -1.56
CHD4-209ENST00000542717 GRIN3BO60391 1043 aa5.32□□□□□ -1.56
CHD4-209ENST00000542717 KLRG1Q96E93 195 aa5.32□□□□□ -1.56
CHD4-209ENST00000542717 BTG4Q9NY30 223 aa5.32□□□□□ -1.56
CHD4-209ENST00000542717 TMEM131LA2VDJ0 1609 aa5.31□□□□□ -1.56
CHD4-209ENST00000542717 LAMC1P11047 1609 aa5.31□□□□□ -1.56
CHD4-209ENST00000542717 USP32Q8NFA0 1604 aa5.31□□□□□ -1.56
CHD4-209ENST00000542717 MTFR1LQ9H019 292 aa5.31□□□□□ -1.56
CHD4-209ENST00000542717 ANO8Q9HCE9 1232 aaPredicted RBP5.31□□□□□ -1.56
CHD4-209ENST00000542717 STK32BQ9NY57 414 aa5.31□□□□□ -1.56
CHD4-209ENST00000542717 ADGRL2O95490 1459 aa5.31□□□□□ -1.56
CHD4-209ENST00000542717 PTPN23Q9H3S7 1636 aa5.3□□□□□ -1.56
CHD4-209ENST00000542717 MYO5BQ9ULV0 1848 aa5.3□□□□□ -1.56
CHD4-209ENST00000542717 NUTM2FA1L443 756 aa5.3□□□□□ -1.56
CHD4-209ENST00000542717 NALCNQ8IZF0 1738 aa5.3□□□□□ -1.56
CHD4-209ENST00000542717 PXDNQ92626 1479 aa5.3□□□□□ -1.56
CHD4-209ENST00000542717 PLCH1Q4KWH8 1693 aa5.3□□□□□ -1.56
CHD4-209ENST00000542717 EEA1Q15075 1411 aa5.3□□□□□ -1.56
CHD4-209ENST00000542717 SPATA31A5Q5VU36 1347 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 SPATA31A3Q5VYP0 1347 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 SPATA31A7Q8IWB4 1347 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 DUOX2Q9NRD8 1548 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 NWD2Q9ULI1 1742 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 GCC2Q8IWJ2 1684 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 HTRA3P83110 453 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 JMYQ8N9B5 988 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 RRP7BPQ9NSQ0 103 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 USP35Q9P2H5 1018 aa5.29□□□□□ -1.56
CHD4-209ENST00000542717 XRN1Q8IZH2 1706 aaKnown RBP5.28□□□□□ -1.56
CHD4-209ENST00000542717 HSPA1AP0DMV8 641 aaKnown RBP5.28□□□□□ -1.56
CHD4-209ENST00000542717 HSPA1BP0DMV9 641 aaKnown RBP5.28□□□□□ -1.56
CHD4-209ENST00000542717 KRT28Q7Z3Y7 464 aa5.28□□□□□ -1.56
CHD4-209ENST00000542717 CASZ1Q86V15 1759 aa5.28□□□□□ -1.56
CHD4-209ENST00000542717 ARHGEF5Q12774 1597 aa5.28□□□□□ -1.56
CHD4-209ENST00000542717 METP08581 1390 aa5.28□□□□□ -1.56
CHD4-209ENST00000542717 MAP3K5Q99683 1374 aa5.28□□□□□ -1.56
CHD4-209ENST00000542717 KIF3CO14782 793 aa5.27□□□□□ -1.57
CHD4-209ENST00000542717 ABCC5O15440 1437 aa5.27□□□□□ -1.57
CHD4-209ENST00000542717 TOMM70O94826 608 aa5.27□□□□□ -1.57
CHD4-209ENST00000542717 POLD1P28340 1107 aa5.27□□□□□ -1.57
CHD4-209ENST00000542717 MLLT1Q03111 559 aaPredicted RBP5.27□□□□□ -1.57
CHD4-209ENST00000542717 PSME1Q06323 249 aa5.27□□□□□ -1.57
CHD4-209ENST00000542717 TNS2Q63HR2 1409 aa5.27□□□□□ -1.57
CHD4-209ENST00000542717 STRN4Q9NRL3 753 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms