RNA–Protein interactions for RNA: ENST00000542296.6

CERS1-202, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-202ENST00000542296 BCANQ96GW7 911 aa28.33■■■□□ 2.13
CERS1-202ENST00000542296 NPC1L1Q9UHC9 1359 aa28.31■■■□□ 2.12
CERS1-202ENST00000542296 SAFB2Q14151 953 aaKnown RBP eCLIP28.31■■■□□ 2.12
CERS1-202ENST00000542296 PLEKHH1Q9ULM0 1364 aa28.29■■■□□ 2.12
CERS1-202ENST00000542296 NINLQ9Y2I6 1382 aa28.28■■■□□ 2.12
CERS1-202ENST00000542296 CCDC184Q52MB2 194 aa28.28■■■□□ 2.12
CERS1-202ENST00000542296 KNSTRNQ9Y448 316 aa28.28■■■□□ 2.12
CERS1-202ENST00000542296 AMER1Q5JTC6 1135 aaPredicted RBP28.28■■■□□ 2.12
CERS1-202ENST00000542296 WAPLQ7Z5K2 1190 aa28.28■■■□□ 2.12
CERS1-202ENST00000542296 MINK1Q8N4C8 1332 aaPredicted RBP28.27■■■□□ 2.12
CERS1-202ENST00000542296 MYBBP1AQ9BQG0 1328 aaKnown RBP28.27■■■□□ 2.12
CERS1-202ENST00000542296 SLC26A8Q96RN1 970 aa28.26■■■□□ 2.11
CERS1-202ENST00000542296 ATAD2Q6PL18 1390 aa28.26■■■□□ 2.11
CERS1-202ENST00000542296 PTPRUQ92729 1446 aa28.26■■■□□ 2.11
CERS1-202ENST00000542296 ANKLE2Q86XL3 938 aa28.26■■■□□ 2.11
CERS1-202ENST00000542296 CABP2Q9NPB3 220 aa28.24■■■□□ 2.11
CERS1-202ENST00000542296 PIK3R4Q99570 1358 aa28.24■■■□□ 2.11
CERS1-202ENST00000542296 CARD14Q9BXL6 1004 aa28.24■■■□□ 2.11
CERS1-202ENST00000542296 SLC12A5Q9H2X9 1139 aa28.24■■■□□ 2.11
CERS1-202ENST00000542296 MRS2Q9HD23 443 aa28.24■■■□□ 2.11
CERS1-202ENST00000542296 ROBO2Q9HCK4 1378 aa28.23■■■□□ 2.11
CERS1-202ENST00000542296 XRN1Q8IZH2 1706 aaKnown RBP28.22■■■□□ 2.11
CERS1-202ENST00000542296 BRD4O60885 1362 aaPredicted RBP28.21■■■□□ 2.11
CERS1-202ENST00000542296 PTCH1Q13635 1447 aa28.21■■■□□ 2.11
CERS1-202ENST00000542296 USP32Q8NFA0 1604 aa28.21■■■□□ 2.11
CERS1-202ENST00000542296 ADGRB2O60241 1585 aa28.2■■■□□ 2.11
CERS1-202ENST00000542296 ANKRD36BQ8N2N9 1353 aa28.2■■■□□ 2.11
CERS1-202ENST00000542296 SRPK2P78362 688 aaKnown RBP28.2■■■□□ 2.11
CERS1-202ENST00000542296 CDK19Q9BWU1 502 aa28.2■■■□□ 2.11
CERS1-202ENST00000542296 CC2D1BQ5T0F9 858 aaKnown RBP28.2■■■□□ 2.1
CERS1-202ENST00000542296 CNGB1Q14028 1251 aaPredicted RBP28.19■■■□□ 2.1
CERS1-202ENST00000542296 TMC1Q8TDI8 760 aa28.19■■■□□ 2.1
CERS1-202ENST00000542296 NLRP13Q86W25 1043 aa28.17■■■□□ 2.1
CERS1-202ENST00000542296 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.16■■■□□ 2.1
CERS1-202ENST00000542296 AMOTL2Q9Y2J4 779 aa28.16■■■□□ 2.1
CERS1-202ENST00000542296 WASLO00401 505 aaPredicted RBP28.16■■■□□ 2.1
CERS1-202ENST00000542296 CHD2O14647 1828 aaKnown RBP28.14■■■□□ 2.1
CERS1-202ENST00000542296 NSD3Q9BZ95 1437 aa28.13■■■□□ 2.09
CERS1-202ENST00000542296 CD163L1Q9NR16 1453 aa28.12■■■□□ 2.09
CERS1-202ENST00000542296 NPHP4O75161 1426 aaPredicted RBP28.1■■■□□ 2.09
CERS1-202ENST00000542296 A0A1W2PP64 1363 aa28.09■■■□□ 2.09
CERS1-202ENST00000542296 PNISRQ8TF01 805 aaKnown RBP28.09■■■□□ 2.09
CERS1-202ENST00000542296 ATP7BP35670 1465 aa28.08■■■□□ 2.09
CERS1-202ENST00000542296 KDM4FA0A1W2PPD8 638 aa28.08■■■□□ 2.09
CERS1-202ENST00000542296 TERF2IPQ9NYB0 399 aa28.07■■■□□ 2.08
CERS1-202ENST00000542296 CGNL1Q0VF96 1302 aa28.05■■■□□ 2.08
CERS1-202ENST00000542296 NSD2O96028 1365 aa28.05■■■□□ 2.08
CERS1-202ENST00000542296 FAM9BQ8IZU0 186 aa28.04■■■□□ 2.08
CERS1-202ENST00000542296 PPP2R1AP30153 589 aa28.04■■■□□ 2.08
CERS1-202ENST00000542296 CABP1Q9NZU7 370 aa28.04■■■□□ 2.08
CERS1-202ENST00000542296 KCNA6P17658 529 aa28.02■■■□□ 2.08
CERS1-202ENST00000542296 NUDT16Q96DE0 195 aaKnown RBP28.01■■■□□ 2.07
CERS1-202ENST00000542296 CCDC61Q9Y6R9 512 aa28.01■■■□□ 2.07
CERS1-202ENST00000542296 TOPAZ1Q8N9V7 1692 aa28.01■■■□□ 2.07
CERS1-202ENST00000542296 HNRNPUQ00839 825 aaKnown RBP eCLIP28■■■□□ 2.07
CERS1-202ENST00000542296 CPSF1Q10570 1443 aaKnown RBP28■■■□□ 2.07
CERS1-202ENST00000542296 PPIP5K1Q6PFW1 1433 aa28■■■□□ 2.07
CERS1-202ENST00000542296 HDGFL2Q7Z4V5 671 aaPredicted RBP28■■■□□ 2.07
CERS1-202ENST00000542296 NCKAP5LQ9HCH0 1330 aa27.99■■■□□ 2.07
CERS1-202ENST00000542296 CDC42BPGQ6DT37 1551 aa27.98■■■□□ 2.07
CERS1-202ENST00000542296 PRR36Q9H6K5 1346 aa27.97■■■□□ 2.07
CERS1-202ENST00000542296 ANKRD26Q9UPS8 1709 aa27.97■■■□□ 2.07
CERS1-202ENST00000542296 NWD1Q149M9 1564 aa27.97■■■□□ 2.07
CERS1-202ENST00000542296 AKAP12Q02952 1782 aa27.96■■■□□ 2.07
CERS1-202ENST00000542296 INSRP06213 1382 aa27.95■■■□□ 2.07
CERS1-202ENST00000542296 MON2Q7Z3U7 1717 aa27.94■■■□□ 2.06
CERS1-202ENST00000542296 KIF20BQ96Q89 1820 aa27.93■■■□□ 2.06
CERS1-202ENST00000542296 ITSN1Q15811 1721 aa27.92■■■□□ 2.06
CERS1-202ENST00000542296 MORC1Q86VD1 984 aa27.92■■■□□ 2.06
CERS1-202ENST00000542296 EDC4Q6P2E9 1401 aaKnown RBP27.91■■■□□ 2.06
CERS1-202ENST00000542296 LMTK3Q96Q04 1460 aa27.91■■■□□ 2.06
CERS1-202ENST00000542296 NALCNQ8IZF0 1738 aa27.9■■■□□ 2.06
CERS1-202ENST00000542296 PLEKHG3A1L390 1219 aa27.9■■■□□ 2.06
CERS1-202ENST00000542296 FYB1O15117 783 aa27.89■■■□□ 2.06
CERS1-202ENST00000542296 FMN2Q9NZ56 1722 aa27.89■■■□□ 2.06
CERS1-202ENST00000542296 ZNF692Q9BU19 519 aaPredicted RBP27.88■■■□□ 2.05
CERS1-202ENST00000542296 ANKARQ7Z5J8 1434 aa27.88■■■□□ 2.05
CERS1-202ENST00000542296 POLR3AO14802 1390 aaPredicted RBP27.86■■■□□ 2.05
CERS1-202ENST00000542296 ZBED9Q6R2W3 1325 aa27.86■■■□□ 2.05
CERS1-202ENST00000542296 RGPD8O14715 1765 aaPredicted RBP27.85■■■□□ 2.05
CERS1-202ENST00000542296 ADGRL3Q9HAR2 1447 aa27.84■■■□□ 2.05
CERS1-202ENST00000542296 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.05
CERS1-202ENST00000542296 NRKQ7Z2Y5 1582 aa27.83■■■□□ 2.05
CERS1-202ENST00000542296 GGNBP2Q9H3C7 697 aa27.81■■■□□ 2.04
CERS1-202ENST00000542296 BLMP54132 1417 aaPredicted RBP27.81■■■□□ 2.04
CERS1-202ENST00000542296 STRCQ7RTU9 1775 aa27.8■■■□□ 2.04
CERS1-202ENST00000542296 HSPA2P54652 639 aa27.8■■■□□ 2.04
CERS1-202ENST00000542296 ACEP12821 1306 aa27.79■■■□□ 2.04
CERS1-202ENST00000542296 USP6P35125 1406 aa27.76■■■□□ 2.04
CERS1-202ENST00000542296 SSH2Q76I76 1423 aa27.76■■■□□ 2.04
CERS1-202ENST00000542296 NUTM2FA1L443 756 aa27.76■■■□□ 2.03
CERS1-202ENST00000542296 TNNT2P45379 298 aaPredicted RBP27.75■■■□□ 2.03
CERS1-202ENST00000542296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.75■■■□□ 2.03
CERS1-202ENST00000542296 STRCP1A6NGW2 1772 aa27.75■■■□□ 2.03
CERS1-202ENST00000542296 ADAMTS8Q9UP79 889 aa27.75■■■□□ 2.03
CERS1-202ENST00000542296 SHPRHQ149N8 1683 aa27.74■■■□□ 2.03
CERS1-202ENST00000542296 MTHFSP49914 203 aa27.74■■■□□ 2.03
CERS1-202ENST00000542296 SUPT16HQ9Y5B9 1047 aaKnown RBP27.73■■■□□ 2.03
CERS1-202ENST00000542296 WDR43Q15061 677 aaKnown RBP eCLIP27.73■■■□□ 2.03
CERS1-202ENST00000542296 TTC21BQ7Z4L5 1316 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms