RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
TMEM50B-210ENST00000542230 LTKP29376 864 aa23.19■■□□□ 1.3
TMEM50B-210ENST00000542230 TMEM2Q9UHN6 1383 aa23.18■■□□□ 1.3
TMEM50B-210ENST00000542230 UBR1Q8IWV7 1749 aa23.17■■□□□ 1.3
TMEM50B-210ENST00000542230 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.16■■□□□ 1.3
TMEM50B-210ENST00000542230 TXNDC2Q86VQ3 553 aa23.16■■□□□ 1.3
TMEM50B-210ENST00000542230 NEFLP07196 543 aa23.15■■□□□ 1.3
TMEM50B-210ENST00000542230 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
TMEM50B-210ENST00000542230 C3P01024 1663 aa23.15■■□□□ 1.3
TMEM50B-210ENST00000542230 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
TMEM50B-210ENST00000542230 FER1L4A9Z1Z3 1794 aa23.12■■□□□ 1.29
TMEM50B-210ENST00000542230 PUS7Q96PZ0 661 aaKnown RBP23.12■■□□□ 1.29
TMEM50B-210ENST00000542230 A0A1W2PP64 1363 aa23.11■■□□□ 1.29
TMEM50B-210ENST00000542230 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
TMEM50B-210ENST00000542230 ANKRD36BQ8N2N9 1353 aa23.1■■□□□ 1.29
TMEM50B-210ENST00000542230 ABCC11Q96J66 1382 aa23.1■■□□□ 1.29
TMEM50B-210ENST00000542230 BLMP54132 1417 aaPredicted RBP23.09■■□□□ 1.29
TMEM50B-210ENST00000542230 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
TMEM50B-210ENST00000542230 SLC26A8Q96RN1 970 aa23.09■■□□□ 1.29
TMEM50B-210ENST00000542230 NUDCQ9Y266 331 aa23.09■■□□□ 1.29
TMEM50B-210ENST00000542230 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
TMEM50B-210ENST00000542230 CDCA7LQ96GN5 454 aa23.08■■□□□ 1.29
TMEM50B-210ENST00000542230 HDGFP51858 240 aaKnown RBP23.07■■□□□ 1.28
TMEM50B-210ENST00000542230 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
TMEM50B-210ENST00000542230 WDR43Q15061 677 aaKnown RBP eCLIP23.07■■□□□ 1.28
TMEM50B-210ENST00000542230 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
TMEM50B-210ENST00000542230 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
TMEM50B-210ENST00000542230 CD163L1Q9NR16 1453 aa23.06■■□□□ 1.28
TMEM50B-210ENST00000542230 CCDC146Q8IYE0 955 aa23.05■■□□□ 1.28
TMEM50B-210ENST00000542230 NCKAP5LQ9HCH0 1330 aa23.05■■□□□ 1.28
TMEM50B-210ENST00000542230 DLC1Q96QB1 1528 aa23.05■■□□□ 1.28
TMEM50B-210ENST00000542230 GGNBP2Q9H3C7 697 aa23.04■■□□□ 1.28
TMEM50B-210ENST00000542230 ATAD2Q6PL18 1390 aa23.03■■□□□ 1.28
TMEM50B-210ENST00000542230 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
TMEM50B-210ENST00000542230 MTHFSP49914 203 aa23■■□□□ 1.27
TMEM50B-210ENST00000542230 PLEKHG1Q9ULL1 1385 aa23■■□□□ 1.27
TMEM50B-210ENST00000542230 WASLO00401 505 aaPredicted RBP22.99■■□□□ 1.27
TMEM50B-210ENST00000542230 FYB1O15117 783 aa22.99■■□□□ 1.27
TMEM50B-210ENST00000542230 TERF2IPQ9NYB0 399 aa22.98■■□□□ 1.27
TMEM50B-210ENST00000542230 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
TMEM50B-210ENST00000542230 USP32Q8NFA0 1604 aa22.98■■□□□ 1.27
TMEM50B-210ENST00000542230 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
TMEM50B-210ENST00000542230 INSRP06213 1382 aa22.97■■□□□ 1.27
TMEM50B-210ENST00000542230 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
TMEM50B-210ENST00000542230 TECPR2O15040 1411 aa22.96■■□□□ 1.27
TMEM50B-210ENST00000542230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.96■■□□□ 1.27
TMEM50B-210ENST00000542230 NUTM2FA1L443 756 aa22.95■■□□□ 1.26
TMEM50B-210ENST00000542230 FBLN1P23142 703 aa22.95■■□□□ 1.26
TMEM50B-210ENST00000542230 THEMISQ8N1K5 641 aaPredicted RBP22.95■■□□□ 1.26
TMEM50B-210ENST00000542230 RIMS1Q86UR5 1692 aaKnown RBP22.95■■□□□ 1.26
TMEM50B-210ENST00000542230 POLR3AO14802 1390 aaPredicted RBP22.95■■□□□ 1.26
TMEM50B-210ENST00000542230 ARHGAP23Q9P227 1491 aa22.95■■□□□ 1.26
TMEM50B-210ENST00000542230 SLIT1O75093 1534 aa22.94■■□□□ 1.26
TMEM50B-210ENST00000542230 MED14O60244 1454 aa22.94■■□□□ 1.26
TMEM50B-210ENST00000542230 APAF1O14727 1248 aa22.93■■□□□ 1.26
TMEM50B-210ENST00000542230 HDGFL2Q7Z4V5 671 aaPredicted RBP22.93■■□□□ 1.26
TMEM50B-210ENST00000542230 FAM135BQ49AJ0 1406 aa22.93■■□□□ 1.26
TMEM50B-210ENST00000542230 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
TMEM50B-210ENST00000542230 PRR36Q9H6K5 1346 aa22.92■■□□□ 1.26
TMEM50B-210ENST00000542230 CPS1P31327 1500 aa22.92■■□□□ 1.26
TMEM50B-210ENST00000542230 AMOTL2Q9Y2J4 779 aa22.91■■□□□ 1.26
TMEM50B-210ENST00000542230 SIRT1Q96EB6 747 aa22.91■■□□□ 1.26
TMEM50B-210ENST00000542230 KNDC1Q76NI1 1749 aa22.9■■□□□ 1.26
TMEM50B-210ENST00000542230 PPIP5K1Q6PFW1 1433 aa22.9■■□□□ 1.26
TMEM50B-210ENST00000542230 NSD2O96028 1365 aa22.9■■□□□ 1.26
TMEM50B-210ENST00000542230 SHPRHQ149N8 1683 aa22.89■■□□□ 1.25
TMEM50B-210ENST00000542230 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.89■■□□□ 1.25
TMEM50B-210ENST00000542230 PDE3BQ13370 1112 aa22.89■■□□□ 1.25
TMEM50B-210ENST00000542230 ZRANB1Q9UGI0 708 aa22.89■■□□□ 1.25
TMEM50B-210ENST00000542230 RNF123Q5XPI4 1314 aa22.88■■□□□ 1.25
TMEM50B-210ENST00000542230 ZNF521Q96K83 1311 aa22.87■■□□□ 1.25
TMEM50B-210ENST00000542230 SPINK5Q9NQ38 1064 aaPredicted RBP22.86■■□□□ 1.25
TMEM50B-210ENST00000542230 TBX22Q9Y458 520 aa22.86■■□□□ 1.25
TMEM50B-210ENST00000542230 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
TMEM50B-210ENST00000542230 CCDC61Q9Y6R9 512 aa22.86■■□□□ 1.25
TMEM50B-210ENST00000542230 CEP170BQ9Y4F5 1589 aaPredicted RBP22.85■■□□□ 1.25
TMEM50B-210ENST00000542230 RCAN3Q9UKA8 241 aa22.85■■□□□ 1.25
TMEM50B-210ENST00000542230 NME9Q86XW9 330 aa22.84■■□□□ 1.25
TMEM50B-210ENST00000542230 CPSF1Q10570 1443 aaKnown RBP22.84■■□□□ 1.25
TMEM50B-210ENST00000542230 RRP7AQ9Y3A4 280 aaKnown RBP22.84■■□□□ 1.25
TMEM50B-210ENST00000542230 ATP7BP35670 1465 aa22.83■■□□□ 1.25
TMEM50B-210ENST00000542230 ADAMTSL3P82987 1691 aa22.82■■□□□ 1.24
TMEM50B-210ENST00000542230 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
TMEM50B-210ENST00000542230 B4GALNT3Q6L9W6 998 aa22.81■■□□□ 1.24
TMEM50B-210ENST00000542230 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
TMEM50B-210ENST00000542230 KCNA6P17658 529 aa22.8■■□□□ 1.24
TMEM50B-210ENST00000542230 DUSP27Q5VZP5 1158 aa22.8■■□□□ 1.24
TMEM50B-210ENST00000542230 U2AF1L5P0DN76 240 aaPredicted RBP22.79■■□□□ 1.24
TMEM50B-210ENST00000542230 U2AF1Q01081 240 aaKnown RBP eCLIP22.79■■□□□ 1.24
TMEM50B-210ENST00000542230 GOLGA2Q08379 1002 aa22.79■■□□□ 1.24
TMEM50B-210ENST00000542230 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
TMEM50B-210ENST00000542230 PPM1GO15355 546 aaPredicted RBP22.78■■□□□ 1.24
TMEM50B-210ENST00000542230 PLIN1O60240 522 aa22.78■■□□□ 1.24
TMEM50B-210ENST00000542230 PPP4R2Q9NY27 417 aa22.78■■□□□ 1.24
TMEM50B-210ENST00000542230 KIF20BQ96Q89 1820 aa22.77■■□□□ 1.24
TMEM50B-210ENST00000542230 RRP1P56182 461 aaKnown RBP22.77■■□□□ 1.24
TMEM50B-210ENST00000542230 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.24
TMEM50B-210ENST00000542230 TCP11L2Q8N4U5 519 aa22.77■■□□□ 1.24
TMEM50B-210ENST00000542230 U2SURPO15042 1029 aaKnown RBP22.76■■□□□ 1.23
TMEM50B-210ENST00000542230 SLFN5Q08AF3 891 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms