RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 CABP2Q9NPB3 220 aa14.6□□□□□ -0.07
EIF3A-203ENST00000541549 MTERF4Q7Z6M4 381 aaKnown RBP14.6□□□□□ -0.07
EIF3A-203ENST00000541549 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
EIF3A-203ENST00000541549 FOSBP53539 338 aa14.59□□□□□ -0.07
EIF3A-203ENST00000541549 HFM1A2PYH4 1435 aa14.58□□□□□ -0.07
EIF3A-203ENST00000541549 RABEP1Q15276 862 aa14.58□□□□□ -0.08
EIF3A-203ENST00000541549 SLC12A5Q9H2X9 1139 aa14.58□□□□□ -0.08
EIF3A-203ENST00000541549 NOB1Q9ULX3 412 aaKnown RBP14.58□□□□□ -0.08
EIF3A-203ENST00000541549 FIBPO43427 364 aa14.58□□□□□ -0.08
EIF3A-203ENST00000541549 TPD52L1Q16890 204 aaPredicted RBP14.58□□□□□ -0.08
EIF3A-203ENST00000541549 CUX1P39880 1505 aa14.58□□□□□ -0.08
EIF3A-203ENST00000541549 ROCK1Q13464 1354 aa14.58□□□□□ -0.08
EIF3A-203ENST00000541549 A0A0U1RQG5 324 aaPredicted RBP14.58□□□□□ -0.08
EIF3A-203ENST00000541549 PTPRGP23470 1445 aa14.57□□□□□ -0.08
EIF3A-203ENST00000541549 PDE4CQ08493 712 aa14.57□□□□□ -0.08
EIF3A-203ENST00000541549 TSPYL4Q9UJ04 414 aa14.57□□□□□ -0.08
EIF3A-203ENST00000541549 RNF20Q5VTR2 975 aa14.56□□□□□ -0.08
EIF3A-203ENST00000541549 GPS2Q13227 327 aa14.56□□□□□ -0.08
EIF3A-203ENST00000541549 TRIM5Q9C035 493 aa14.56□□□□□ -0.08
EIF3A-203ENST00000541549 K7ELQ4 463 aaPredicted RBP14.56□□□□□ -0.08
EIF3A-203ENST00000541549 CPLX1O14810 134 aa14.56□□□□□ -0.08
EIF3A-203ENST00000541549 FYCO1Q9BQS8 1478 aa14.56□□□□□ -0.08
EIF3A-203ENST00000541549 PRKAR2BP31323 418 aa14.55□□□□□ -0.08
EIF3A-203ENST00000541549 CCDC73Q6ZRK6 1079 aa14.55□□□□□ -0.08
EIF3A-203ENST00000541549 TSPY26PQ9H489 355 aa14.55□□□□□ -0.08
EIF3A-203ENST00000541549 MVPQ14764 893 aaKnown RBP14.55□□□□□ -0.08
EIF3A-203ENST00000541549 ATF7IPQ6VMQ6 1270 aa14.55□□□□□ -0.08
EIF3A-203ENST00000541549 HMGN5P82970 282 aaKnown RBP14.55□□□□□ -0.08
EIF3A-203ENST00000541549 CPLX2Q6PUV4 134 aaKnown RBP14.55□□□□□ -0.08
EIF3A-203ENST00000541549 SPC24Q8NBT2 197 aa14.55□□□□□ -0.08
EIF3A-203ENST00000541549 RRP9O43818 475 aaKnown RBP14.54□□□□□ -0.08
EIF3A-203ENST00000541549 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
EIF3A-203ENST00000541549 TEX35Q5T0J7 233 aa14.54□□□□□ -0.08
EIF3A-203ENST00000541549 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
EIF3A-203ENST00000541549 MNS1Q8NEH6 495 aa14.54□□□□□ -0.08
EIF3A-203ENST00000541549 NEXNQ0ZGT2 675 aa14.53□□□□□ -0.08
EIF3A-203ENST00000541549 GCC1Q96CN9 775 aa14.53□□□□□ -0.08
EIF3A-203ENST00000541549 SDF4Q9BRK5 362 aa14.53□□□□□ -0.08
EIF3A-203ENST00000541549 SLFN5Q08AF3 891 aa14.53□□□□□ -0.08
EIF3A-203ENST00000541549 TPM1P09493 284 aa14.53□□□□□ -0.08
EIF3A-203ENST00000541549 G3BP1Q13283 466 aaKnown RBP eCLIP14.53□□□□□ -0.082e-7■■■□□ 16.3
EIF3A-203ENST00000541549 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
EIF3A-203ENST00000541549 PRXQ9BXM0 1461 aa14.52□□□□□ -0.08
EIF3A-203ENST00000541549 SURF6O75683 361 aaKnown RBP14.52□□□□□ -0.08
EIF3A-203ENST00000541549 TWISTNBQ3B726 338 aaPredicted RBP14.52□□□□□ -0.08
EIF3A-203ENST00000541549 CHMP4CQ96CF2 233 aa14.52□□□□□ -0.08
EIF3A-203ENST00000541549 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.52□□□□□ -0.08
EIF3A-203ENST00000541549 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 UBTFL1P0CB47 393 aaPredicted RBP14.51□□□□□ -0.09
EIF3A-203ENST00000541549 UQCRHLA0A096LP55 91 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 UQCRHP07919 91 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 FMNL2Q96PY5 1086 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 KIAA1107Q9UPP5 1409 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 EID1Q9Y6B2 187 aa14.51□□□□□ -0.09
EIF3A-203ENST00000541549 ERC2O15083 957 aa14.5□□□□□ -0.09
EIF3A-203ENST00000541549 MCM2P49736 904 aa14.5□□□□□ -0.09
EIF3A-203ENST00000541549 ERICH3Q5RHP9 1530 aa14.5□□□□□ -0.09
EIF3A-203ENST00000541549 WWC1Q8IX03 1113 aa14.5□□□□□ -0.09
EIF3A-203ENST00000541549 CIZ1Q9ULV3 898 aaPredicted RBP14.5□□□□□ -0.09
EIF3A-203ENST00000541549 NAIPQ13075 1403 aa14.5□□□□□ -0.09
EIF3A-203ENST00000541549 APPP05067 770 aa14.5□□□□□ -0.09
EIF3A-203ENST00000541549 ZSCAN30Q86W11 494 aa14.5□□□□□ -0.09
EIF3A-203ENST00000541549 ARGLU1Q9NWB6 273 aaPredicted RBP14.5□□□□□ -0.09
EIF3A-203ENST00000541549 AKAP17AQ02040 695 aaKnown RBP14.49□□□□□ -0.09
EIF3A-203ENST00000541549 AFAP1Q8N556 730 aa14.49□□□□□ -0.09
EIF3A-203ENST00000541549 TBC1D2Q9BYX2 928 aa14.49□□□□□ -0.09
EIF3A-203ENST00000541549 HSP90AB4PQ58FF6 505 aa14.49□□□□□ -0.09
EIF3A-203ENST00000541549 TRIM29Q14134 588 aa14.49□□□□□ -0.09
EIF3A-203ENST00000541549 WDR63Q8IWG1 891 aa14.49□□□□□ -0.09
EIF3A-203ENST00000541549 CWC22Q9HCG8 908 aaKnown RBP14.49□□□□□ -0.09
EIF3A-203ENST00000541549 IPO7O95373 1038 aaKnown RBP14.48□□□□□ -0.09
EIF3A-203ENST00000541549 SYNE3Q6ZMZ3 975 aa14.48□□□□□ -0.09
EIF3A-203ENST00000541549 CLASRPQ8N2M8 674 aaKnown RBP14.48□□□□□ -0.09
EIF3A-203ENST00000541549 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
EIF3A-203ENST00000541549 GNAI3P08754 354 aa14.47□□□□□ -0.09
EIF3A-203ENST00000541549 CEBPZQ03701 1054 aaKnown RBP14.46□□□□□ -0.09
EIF3A-203ENST00000541549 SYCE3A1L190 88 aa14.46□□□□□ -0.1
EIF3A-203ENST00000541549 TRDNQ13061 729 aa14.46□□□□□ -0.1
EIF3A-203ENST00000541549 CNTROBQ8N137 903 aa14.46□□□□□ -0.1
EIF3A-203ENST00000541549 TMEM57Q8N5G2 664 aa14.46□□□□□ -0.1
EIF3A-203ENST00000541549 LETM1O95202 739 aaPredicted RBP14.45□□□□□ -0.1
EIF3A-203ENST00000541549 AIMP1Q12904 312 aaKnown RBP14.45□□□□□ -0.1
EIF3A-203ENST00000541549 MARCH6O60337 910 aa14.45□□□□□ -0.1
EIF3A-203ENST00000541549 DDX58O95786 925 aaKnown RBP14.45□□□□□ -0.1
EIF3A-203ENST00000541549 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
EIF3A-203ENST00000541549 KINO60870 393 aaKnown RBP14.44□□□□□ -0.1
EIF3A-203ENST00000541549 PDCP20941 246 aa14.44□□□□□ -0.1
EIF3A-203ENST00000541549 LRRFIP1Q32MZ4 808 aaKnown RBP14.44□□□□□ -0.1
EIF3A-203ENST00000541549 CCDC70Q6NSX1 233 aa14.44□□□□□ -0.1
EIF3A-203ENST00000541549 PCMTD1Q96MG8 357 aaPredicted RBP14.44□□□□□ -0.1
EIF3A-203ENST00000541549 NEUROD6Q96NK8 337 aa14.44□□□□□ -0.1
EIF3A-203ENST00000541549 FSD1Q9BTV5 496 aa14.44□□□□□ -0.1
EIF3A-203ENST00000541549 NINLQ9Y2I6 1382 aa14.44□□□□□ -0.1
EIF3A-203ENST00000541549 SETQ01105 290 aaPredicted RBP14.44□□□□□ -0.1
EIF3A-203ENST00000541549 PDILTQ8N807 584 aa14.44□□□□□ -0.1
EIF3A-203ENST00000541549 TIAM1Q13009 1591 aa14.44□□□□□ -0.1
EIF3A-203ENST00000541549 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
EIF3A-203ENST00000541549 HSP90B2PQ58FF3 399 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms