RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 PLCD4Q9BRC7 762 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 TBC1D2Q9BYX2 928 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 DIAPH3Q9NSV4 1193 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 BSDC1Q9NW68 430 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-211ENST00000539921 CCDC9Q9Y3X0 531 aaKnown RBP7.58□□□□□ -1.2
SNHG1-211ENST00000539921 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-211ENST00000539921 MTUS2Q5JR59 1369 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 CUX1P39880 1505 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 GCC2Q8IWJ2 1684 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 KIF7Q2M1P5 1343 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 MYBBP1AQ9BQG0 1328 aaKnown RBP7.57□□□□□ -1.2
SNHG1-211ENST00000539921 GAPVD1Q14C86 1478 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 TOP2BQ02880 1626 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 CC2D2AQ9P2K1 1620 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 BIVM-ERCC5R4GMW8 1640 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 CTIFO43310 598 aaKnown RBP7.57□□□□□ -1.2
SNHG1-211ENST00000539921 SATB1Q01826 763 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 ZNF710Q8N1W2 664 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 MNS1Q8NEH6 495 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 TAOK2Q9UL54 1235 aa7.57□□□□□ -1.2
SNHG1-211ENST00000539921 THOC2Q8NI27 1593 aaKnown RBP7.57□□□□□ -1.2
SNHG1-211ENST00000539921 CALRP27797 417 aaKnown RBP7.56□□□□□ -1.2
SNHG1-211ENST00000539921 BRPF1P55201 1214 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-211ENST00000539921 MUM1L1Q5H9M0 696 aa7.56□□□□□ -1.2
SNHG1-211ENST00000539921 EGFL6Q8IUX8 553 aa7.56□□□□□ -1.2
SNHG1-211ENST00000539921 SMC5Q8IY18 1101 aa7.56□□□□□ -1.2
SNHG1-211ENST00000539921 SPTLC3Q9NUV7 552 aa7.56□□□□□ -1.2
SNHG1-211ENST00000539921 SLC52A1Q9NWF4 448 aa7.56□□□□□ -1.2
SNHG1-211ENST00000539921 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.56□□□□□ -1.2
SNHG1-211ENST00000539921 CEP83Q9Y592 693 aa7.56□□□□□ -1.2
SNHG1-211ENST00000539921 E9PCH4 1651 aa7.56□□□□□ -1.2
SNHG1-211ENST00000539921 CAMSAP2Q08AD1 1489 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 TEX14Q8IWB6 1497 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 RTEL1-TNFRSF6BF6WH68 1400 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 SLFN14P0C7P3 912 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 RAB3GAP1Q15042 981 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 ATP2B3Q16720 1220 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 GAS2L3Q86XJ1 694 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 PIBF1Q8WXW3 757 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 CRBNQ96SW2 442 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 KCNG1Q9UIX4 513 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 CLEC11AQ9Y240 323 aa7.55□□□□□ -1.2
SNHG1-211ENST00000539921 MORC2Q9Y6X9 1032 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-211ENST00000539921 RPRD2Q5VT52 1461 aaKnown RBP7.55□□□□□ -1.2
SNHG1-211ENST00000539921 PLXNC1O60486 1568 aa7.54□□□□□ -1.2
SNHG1-211ENST00000539921 CBX1P83916 185 aa7.54□□□□□ -1.2
SNHG1-211ENST00000539921 LMOD3Q0VAK6 560 aa7.54□□□□□ -1.2
SNHG1-211ENST00000539921 FKBP5Q13451 457 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-211ENST00000539921 TERF2Q15554 542 aa7.54□□□□□ -1.2
SNHG1-211ENST00000539921 NGEFQ8N5V2 710 aa7.54□□□□□ -1.2
SNHG1-211ENST00000539921 TACO1Q9BSH4 297 aaKnown RBP7.54□□□□□ -1.2
SNHG1-211ENST00000539921 RBM42Q9BTD8 480 aaKnown RBP7.54□□□□□ -1.2
SNHG1-211ENST00000539921 HIRIP3Q9BW71 556 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-211ENST00000539921 SMC4Q9NTJ3 1288 aa7.54□□□□□ -1.2
SNHG1-211ENST00000539921 SCAF11Q99590 1463 aaKnown RBP7.54□□□□□ -1.2
SNHG1-211ENST00000539921 KIF16BQ96L93 1317 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 NAIPQ13075 1403 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 EPRSP07814 1512 aaKnown RBP7.53□□□□□ -1.2
SNHG1-211ENST00000539921 SMARCA4P51532 1647 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 TPM3P06753 285 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 CCDC172P0C7W6 258 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 ICE2Q659A1 982 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 NBPF11Q86T75 865 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-211ENST00000539921 AKT1S1Q96B36 256 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 SLC26A8Q96RN1 970 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 FEZ2Q9UHY8 353 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-211ENST00000539921 DDX41Q9UJV9 622 aaKnown RBP7.53□□□□□ -1.2
SNHG1-211ENST00000539921 FYCO1Q9BQS8 1478 aa7.53□□□□□ -1.2
SNHG1-211ENST00000539921 SHROOM2Q13796 1616 aa7.52□□□□□ -1.2
SNHG1-211ENST00000539921 MBD5Q9P267 1494 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 PLEKHH1Q9ULM0 1364 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 TTC36A6NLP5 189 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 TRIM6-TRIM34B2RNG4 842 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 REC8O95072 547 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 CAPN2P17655 700 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 GUCY2CP25092 1073 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 XPCQ01831 940 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-211ENST00000539921 TRDNQ13061 729 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 CHAF1AQ13111 956 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-211ENST00000539921 NBPF9Q3BBW0 867 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 TPRNQ4KMQ1 711 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 NLRP13Q86W25 1043 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 HSCBQ8IWL3 235 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 KRT222Q8N1A0 295 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 POLR3GLQ9BT43 218 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 TRIM34Q9BYJ4 488 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 GZF1Q9H116 711 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-211ENST00000539921 MED4Q9NPJ6 270 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 DONSONQ9NYP3 566 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 KIF14Q15058 1648 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 FGD6Q6ZV73 1430 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 KIF27Q86VH2 1401 aa7.52□□□□□ -1.21
SNHG1-211ENST00000539921 SAMD9Q5K651 1589 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 REREQ9P2R6 1566 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 PARD3Q8TEW0 1356 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 GOLGA6L6A8MZA4 724 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 KIF3CO14782 793 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms