RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
CDK5RAP3-202ENST00000536708 TMF1P82094 1093 aa17.78■□□□□ 0.44
CDK5RAP3-202ENST00000536708 ABCC11Q96J66 1382 aa17.77■□□□□ 0.44
CDK5RAP3-202ENST00000536708 ROBO2Q9HCK4 1378 aa17.77■□□□□ 0.44
CDK5RAP3-202ENST00000536708 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.43
CDK5RAP3-202ENST00000536708 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-202ENST00000536708 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-202ENST00000536708 POGKQ9P215 609 aa17.74■□□□□ 0.43
CDK5RAP3-202ENST00000536708 TBX22Q9Y458 520 aa17.74■□□□□ 0.43
CDK5RAP3-202ENST00000536708 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
CDK5RAP3-202ENST00000536708 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
CDK5RAP3-202ENST00000536708 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.43
CDK5RAP3-202ENST00000536708 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
CDK5RAP3-202ENST00000536708 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
CDK5RAP3-202ENST00000536708 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
CDK5RAP3-202ENST00000536708 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
CDK5RAP3-202ENST00000536708 KCNA6P17658 529 aa17.69■□□□□ 0.42
CDK5RAP3-202ENST00000536708 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
CDK5RAP3-202ENST00000536708 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
CDK5RAP3-202ENST00000536708 CABP2Q9NPB3 220 aa17.67■□□□□ 0.42
CDK5RAP3-202ENST00000536708 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
CDK5RAP3-202ENST00000536708 RGPD8O14715 1765 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-202ENST00000536708 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-202ENST00000536708 SRPK2P78362 688 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-202ENST00000536708 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
CDK5RAP3-202ENST00000536708 RBM33Q96EV2 1170 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-202ENST00000536708 USP32Q8NFA0 1604 aa17.63■□□□□ 0.41
CDK5RAP3-202ENST00000536708 TOPAZ1Q8N9V7 1692 aa17.63■□□□□ 0.41
CDK5RAP3-202ENST00000536708 PANK3Q9H999 370 aa17.62■□□□□ 0.41
CDK5RAP3-202ENST00000536708 FKBP8Q14318 412 aa17.61■□□□□ 0.41
CDK5RAP3-202ENST00000536708 SIRT1Q96EB6 747 aa17.61■□□□□ 0.41
CDK5RAP3-202ENST00000536708 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
CDK5RAP3-202ENST00000536708 ATP7BP35670 1465 aa17.61■□□□□ 0.41
CDK5RAP3-202ENST00000536708 PRKRIP1Q9H875 184 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-202ENST00000536708 FMN2Q9NZ56 1722 aa17.6■□□□□ 0.41
CDK5RAP3-202ENST00000536708 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
CDK5RAP3-202ENST00000536708 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
CDK5RAP3-202ENST00000536708 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
CDK5RAP3-202ENST00000536708 XIRP1Q702N8 1843 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-202ENST00000536708 NEFLP07196 543 aa17.59■□□□□ 0.41
CDK5RAP3-202ENST00000536708 ITSN1Q15811 1721 aa17.58■□□□□ 0.41
CDK5RAP3-202ENST00000536708 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-202ENST00000536708 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-202ENST00000536708 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.4
CDK5RAP3-202ENST00000536708 CDC42BPGQ6DT37 1551 aa17.58■□□□□ 0.4
CDK5RAP3-202ENST00000536708 NUTM2FA1L443 756 aa17.57■□□□□ 0.4
CDK5RAP3-202ENST00000536708 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-202ENST00000536708 ATAD2Q6PL18 1390 aa17.57■□□□□ 0.4
CDK5RAP3-202ENST00000536708 PRR36Q9H6K5 1346 aa17.57■□□□□ 0.4
CDK5RAP3-202ENST00000536708 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
CDK5RAP3-202ENST00000536708 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
CDK5RAP3-202ENST00000536708 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
CDK5RAP3-202ENST00000536708 ANP32EQ9BTT0 268 aa17.55■□□□□ 0.4
CDK5RAP3-202ENST00000536708 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
CDK5RAP3-202ENST00000536708 NSD3Q9BZ95 1437 aa17.54■□□□□ 0.4
CDK5RAP3-202ENST00000536708 MON2Q7Z3U7 1717 aa17.54■□□□□ 0.4
CDK5RAP3-202ENST00000536708 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDK5RAP3-202ENST00000536708 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
CDK5RAP3-202ENST00000536708 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
CDK5RAP3-202ENST00000536708 KIF20BQ96Q89 1820 aa17.52■□□□□ 0.4
CDK5RAP3-202ENST00000536708 PUS7Q96PZ0 661 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-202ENST00000536708 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.39
CDK5RAP3-202ENST00000536708 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-202ENST00000536708 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
CDK5RAP3-202ENST00000536708 NUDT16Q96DE0 195 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-202ENST00000536708 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
CDK5RAP3-202ENST00000536708 NRKQ7Z2Y5 1582 aa17.5■□□□□ 0.39
CDK5RAP3-202ENST00000536708 CCDC184Q52MB2 194 aa17.49■□□□□ 0.39
CDK5RAP3-202ENST00000536708 PROSER2Q86WR7 435 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-202ENST00000536708 TMEM94Q12767 1356 aa17.49■□□□□ 0.39
CDK5RAP3-202ENST00000536708 ANKRD26Q9UPS8 1709 aa17.48■□□□□ 0.39
CDK5RAP3-202ENST00000536708 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-202ENST00000536708 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
CDK5RAP3-202ENST00000536708 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
CDK5RAP3-202ENST00000536708 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-202ENST00000536708 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
CDK5RAP3-202ENST00000536708 ERICH6BQ5W0A0 696 aa17.46■□□□□ 0.39
CDK5RAP3-202ENST00000536708 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
CDK5RAP3-202ENST00000536708 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.38
CDK5RAP3-202ENST00000536708 LRRC7Q96NW7 1537 aa17.46■□□□□ 0.38
CDK5RAP3-202ENST00000536708 CCDC61Q9Y6R9 512 aa17.45■□□□□ 0.38
CDK5RAP3-202ENST00000536708 ANKARQ7Z5J8 1434 aa17.44■□□□□ 0.38
CDK5RAP3-202ENST00000536708 ZBED9Q6R2W3 1325 aa17.44■□□□□ 0.38
CDK5RAP3-202ENST00000536708 TERF2IPQ9NYB0 399 aa17.43■□□□□ 0.38
CDK5RAP3-202ENST00000536708 PMFBP1Q8TBY8 1022 aa17.42■□□□□ 0.38
CDK5RAP3-202ENST00000536708 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-202ENST00000536708 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
CDK5RAP3-202ENST00000536708 ACEP12821 1306 aa17.4■□□□□ 0.38
CDK5RAP3-202ENST00000536708 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-202ENST00000536708 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
CDK5RAP3-202ENST00000536708 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-202ENST00000536708 USP6P35125 1406 aa17.39■□□□□ 0.37
CDK5RAP3-202ENST00000536708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDK5RAP3-202ENST00000536708 FAM9BQ8IZU0 186 aa17.39■□□□□ 0.37
CDK5RAP3-202ENST00000536708 MST1RQ04912 1400 aa17.38■□□□□ 0.37
CDK5RAP3-202ENST00000536708 RALBP1Q15311 655 aa17.38■□□□□ 0.37
CDK5RAP3-202ENST00000536708 PIK3C2AO00443 1686 aa17.38■□□□□ 0.37
CDK5RAP3-202ENST00000536708 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
CDK5RAP3-202ENST00000536708 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-202ENST00000536708 DCCP43146 1447 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms