RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
CDH20-202ENST00000536675 CHMP5Q9NZZ3 219 aa18.39■□□□□ 0.53
CDH20-202ENST00000536675 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
CDH20-202ENST00000536675 TRAK2O60296 914 aa18.38■□□□□ 0.53
CDH20-202ENST00000536675 WDR63Q8IWG1 891 aa18.38■□□□□ 0.53
CDH20-202ENST00000536675 C22orf23Q9BZE7 217 aa18.38■□□□□ 0.53
CDH20-202ENST00000536675 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
CDH20-202ENST00000536675 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
CDH20-202ENST00000536675 CLCN1P35523 988 aa18.37■□□□□ 0.53
CDH20-202ENST00000536675 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
CDH20-202ENST00000536675 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
CDH20-202ENST00000536675 PNNQ9H307 717 aaKnown RBP18.36■□□□□ 0.53
CDH20-202ENST00000536675 MAP3K4Q9Y6R4 1608 aa18.36■□□□□ 0.53
CDH20-202ENST00000536675 MFAP1P55081 439 aaKnown RBP18.36■□□□□ 0.53
CDH20-202ENST00000536675 MVPQ14764 893 aaKnown RBP18.36■□□□□ 0.53
CDH20-202ENST00000536675 MORC1Q86VD1 984 aa18.36■□□□□ 0.53
CDH20-202ENST00000536675 NAP1L5Q96NT1 182 aaPredicted RBP18.36■□□□□ 0.53
CDH20-202ENST00000536675 TET3O43151 1660 aa18.35■□□□□ 0.53
CDH20-202ENST00000536675 ABCC1P33527 1531 aa18.35■□□□□ 0.53
CDH20-202ENST00000536675 PLCH2O75038 1416 aa18.34■□□□□ 0.53
CDH20-202ENST00000536675 NSD3Q9BZ95 1437 aa18.34■□□□□ 0.53
CDH20-202ENST00000536675 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
CDH20-202ENST00000536675 DEPDC5O75140 1603 aa18.33■□□□□ 0.53
CDH20-202ENST00000536675 MRE11P49959 708 aa18.33■□□□□ 0.52
CDH20-202ENST00000536675 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.52
CDH20-202ENST00000536675 MYO3AQ8NEV4 1616 aa18.32■□□□□ 0.52
CDH20-202ENST00000536675 KANK1Q14678 1352 aa18.32■□□□□ 0.52
CDH20-202ENST00000536675 CCDC27Q2M243 656 aa18.32■□□□□ 0.52
CDH20-202ENST00000536675 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
CDH20-202ENST00000536675 MYOM2P54296 1465 aa18.31■□□□□ 0.52
CDH20-202ENST00000536675 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
CDH20-202ENST00000536675 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
CDH20-202ENST00000536675 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
CDH20-202ENST00000536675 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
CDH20-202ENST00000536675 FTSJ3Q8IY81 847 aaKnown RBP18.3■□□□□ 0.52
CDH20-202ENST00000536675 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
CDH20-202ENST00000536675 MYH16Q9H6N6 1097 aa18.3■□□□□ 0.52
CDH20-202ENST00000536675 GRPEL1Q9HAV7 217 aa18.29■□□□□ 0.52
CDH20-202ENST00000536675 IFT172Q9UG01 1749 aa18.29■□□□□ 0.52
CDH20-202ENST00000536675 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
CDH20-202ENST00000536675 KIF1BO60333 1816 aa18.29■□□□□ 0.52
CDH20-202ENST00000536675 ZNF518AQ6AHZ1 1483 aa18.29■□□□□ 0.52
CDH20-202ENST00000536675 DDX11L8A8MPP1 907 aa18.28■□□□□ 0.52
CDH20-202ENST00000536675 SBNO2Q9Y2G9 1366 aa18.28■□□□□ 0.52
CDH20-202ENST00000536675 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
CDH20-202ENST00000536675 MTHFSP49914 203 aa18.28■□□□□ 0.52
CDH20-202ENST00000536675 SLC12A5Q9H2X9 1139 aa18.28■□□□□ 0.52
CDH20-202ENST00000536675 AFAP1Q8N556 730 aa18.28■□□□□ 0.52
CDH20-202ENST00000536675 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.52
CDH20-202ENST00000536675 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.52
CDH20-202ENST00000536675 DDIT3P35638 169 aa18.27■□□□□ 0.51
CDH20-202ENST00000536675 VWDEQ8N2E2 1590 aa18.26■□□□□ 0.51
CDH20-202ENST00000536675 ZC3H13Q5T200 1668 aaKnown RBP18.25■□□□□ 0.51
CDH20-202ENST00000536675 HSP90AA1P07900 732 aaKnown RBP18.25■□□□□ 0.51
CDH20-202ENST00000536675 MROH2AA6NES4 1674 aa18.25■□□□□ 0.51
CDH20-202ENST00000536675 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
CDH20-202ENST00000536675 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
CDH20-202ENST00000536675 ERBB4Q15303 1308 aa18.24■□□□□ 0.51
CDH20-202ENST00000536675 TRIM27P14373 513 aa18.24■□□□□ 0.51
CDH20-202ENST00000536675 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
CDH20-202ENST00000536675 ESPNB1AK53 854 aa18.23■□□□□ 0.51
CDH20-202ENST00000536675 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
CDH20-202ENST00000536675 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
CDH20-202ENST00000536675 QRICH2Q9H0J4 1663 aa18.23■□□□□ 0.51
CDH20-202ENST00000536675 GLIPR1L2Q4G1C9 344 aa18.23■□□□□ 0.51
CDH20-202ENST00000536675 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
CDH20-202ENST00000536675 ADGRB2O60241 1585 aa18.23■□□□□ 0.51
CDH20-202ENST00000536675 NRXN1Q9ULB1 1477 aa18.22■□□□□ 0.51
CDH20-202ENST00000536675 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
CDH20-202ENST00000536675 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
CDH20-202ENST00000536675 SMC5Q8IY18 1101 aa18.22■□□□□ 0.51
CDH20-202ENST00000536675 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
CDH20-202ENST00000536675 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDH20-202ENST00000536675 HSP90AA2PQ14568 343 aaPredicted RBP18.22■□□□□ 0.51
CDH20-202ENST00000536675 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
CDH20-202ENST00000536675 RBM25P49756 843 aaKnown RBP18.21■□□□□ 0.51
CDH20-202ENST00000536675 DDX19BQ9UMR2 479 aa18.21■□□□□ 0.51
CDH20-202ENST00000536675 ZCCHC11Q5TAX3 1644 aaKnown RBP18.21■□□□□ 0.51
CDH20-202ENST00000536675 CHD1O14646 1710 aa18.21■□□□□ 0.51
CDH20-202ENST00000536675 CT47B1P0C2W7 299 aaPredicted RBP18.21■□□□□ 0.51
CDH20-202ENST00000536675 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
CDH20-202ENST00000536675 SNX21Q969T3 373 aa18.21■□□□□ 0.51
CDH20-202ENST00000536675 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
CDH20-202ENST00000536675 GAS2L3Q86XJ1 694 aa18.2■□□□□ 0.5
CDH20-202ENST00000536675 KIF3BO15066 747 aa18.2■□□□□ 0.5
CDH20-202ENST00000536675 RRP9O43818 475 aaKnown RBP18.2■□□□□ 0.5
CDH20-202ENST00000536675 SSH1Q8WYL5 1049 aa18.2■□□□□ 0.5
CDH20-202ENST00000536675 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
CDH20-202ENST00000536675 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
CDH20-202ENST00000536675 ADGRL1O94910 1474 aa18.19■□□□□ 0.5
CDH20-202ENST00000536675 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
CDH20-202ENST00000536675 MROH1Q8NDA8 1641 aa18.17■□□□□ 0.5
CDH20-202ENST00000536675 NOS1P29475 1434 aa18.17■□□□□ 0.5
CDH20-202ENST00000536675 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
CDH20-202ENST00000536675 RAB3GAP1Q15042 981 aa18.16■□□□□ 0.5
CDH20-202ENST00000536675 ZBTB40Q9NUA8 1239 aa18.16■□□□□ 0.5
CDH20-202ENST00000536675 CIZ1Q9ULV3 898 aaPredicted RBP18.16■□□□□ 0.5
CDH20-202ENST00000536675 ATP7AQ04656 1500 aa18.16■□□□□ 0.5
CDH20-202ENST00000536675 INO80Q9ULG1 1556 aaPredicted RBP18.16■□□□□ 0.5
CDH20-202ENST00000536675 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms