RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 NISCHQ9Y2I1 1504 aa28.5■■■□□ 2.15
CDH20-202ENST00000536675 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
CDH20-202ENST00000536675 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
CDH20-202ENST00000536675 HRCP23327 699 aa24.35■■□□□ 1.49
CDH20-202ENST00000536675 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
CDH20-202ENST00000536675 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
CDH20-202ENST00000536675 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
CDH20-202ENST00000536675 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
CDH20-202ENST00000536675 CCDC180Q9P1Z9 1646 aa23.94■■□□□ 1.42
CDH20-202ENST00000536675 PPARGC1BQ86YN6 1023 aaKnown RBP23.82■■□□□ 1.4
CDH20-202ENST00000536675 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
CDH20-202ENST00000536675 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
CDH20-202ENST00000536675 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
CDH20-202ENST00000536675 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
CDH20-202ENST00000536675 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
CDH20-202ENST00000536675 ABCC9O60706 1549 aa22.97■■□□□ 1.27
CDH20-202ENST00000536675 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
CDH20-202ENST00000536675 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.25
CDH20-202ENST00000536675 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
CDH20-202ENST00000536675 RSF1Q96T23 1441 aaPredicted RBP22.78■■□□□ 1.24
CDH20-202ENST00000536675 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
CDH20-202ENST00000536675 RB1CC1Q8TDY2 1594 aa22.68■■□□□ 1.22
CDH20-202ENST00000536675 SCRIBQ14160 1630 aa22.63■■□□□ 1.21
CDH20-202ENST00000536675 EHMT2Q96KQ7 1210 aa22.54■■□□□ 1.2
CDH20-202ENST00000536675 ACIN1Q9UKV3 1341 aaKnown RBP22.38■■□□□ 1.17
CDH20-202ENST00000536675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
CDH20-202ENST00000536675 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
CDH20-202ENST00000536675 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
CDH20-202ENST00000536675 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
CDH20-202ENST00000536675 MROH2BQ7Z745 1585 aa22.22■■□□□ 1.15
CDH20-202ENST00000536675 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
CDH20-202ENST00000536675 WIZO95785 1651 aa22.17■■□□□ 1.14
CDH20-202ENST00000536675 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
CDH20-202ENST00000536675 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
CDH20-202ENST00000536675 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.13
CDH20-202ENST00000536675 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
CDH20-202ENST00000536675 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
CDH20-202ENST00000536675 NACADO15069 1562 aa21.99■■□□□ 1.11
CDH20-202ENST00000536675 TTBK1Q5TCY1 1321 aaPredicted RBP21.96■■□□□ 1.11
CDH20-202ENST00000536675 MYT1Q01538 1121 aa21.93■■□□□ 1.1
CDH20-202ENST00000536675 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
CDH20-202ENST00000536675 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
CDH20-202ENST00000536675 CCDC88BA6NC98 1476 aa21.87■■□□□ 1.09
CDH20-202ENST00000536675 ZNF316A6NFI3 1004 aaPredicted RBP21.85■■□□□ 1.09
CDH20-202ENST00000536675 TNIKQ9UKE5 1360 aa21.8■■□□□ 1.08
CDH20-202ENST00000536675 SOGA1O94964 1423 aa21.76■■□□□ 1.07
CDH20-202ENST00000536675 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
CDH20-202ENST00000536675 YTHDC1Q96MU7 727 aaKnown RBP21.73■■□□□ 1.07
CDH20-202ENST00000536675 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
CDH20-202ENST00000536675 MIER1Q8N108 512 aa21.66■■□□□ 1.06
CDH20-202ENST00000536675 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
CDH20-202ENST00000536675 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
CDH20-202ENST00000536675 EEA1Q15075 1411 aa21.65■■□□□ 1.06
CDH20-202ENST00000536675 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.06
CDH20-202ENST00000536675 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
CDH20-202ENST00000536675 GOLGA3Q08378 1498 aa21.58■■□□□ 1.04
CDH20-202ENST00000536675 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
CDH20-202ENST00000536675 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
CDH20-202ENST00000536675 KIF21BO75037 1637 aa21.39■■□□□ 1.01
CDH20-202ENST00000536675 CLIP1P30622 1438 aa21.37■■□□□ 1.01
CDH20-202ENST00000536675 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
CDH20-202ENST00000536675 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
CDH20-202ENST00000536675 SYNJ1O43426 1573 aa21.3■■□□□ 1
CDH20-202ENST00000536675 APLP2Q06481 763 aa21.25■□□□□ 0.99
CDH20-202ENST00000536675 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
CDH20-202ENST00000536675 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
CDH20-202ENST00000536675 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
CDH20-202ENST00000536675 SUPT16HQ9Y5B9 1047 aaKnown RBP21.2■□□□□ 0.98
CDH20-202ENST00000536675 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
CDH20-202ENST00000536675 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
CDH20-202ENST00000536675 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
CDH20-202ENST00000536675 TSHZ2Q9NRE2 1034 aa21.02■□□□□ 0.96
CDH20-202ENST00000536675 BICRAQ9NZM4 1560 aa20.99■□□□□ 0.95
CDH20-202ENST00000536675 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
CDH20-202ENST00000536675 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
CDH20-202ENST00000536675 KANK4Q5T7N3 995 aaPredicted RBP20.97■□□□□ 0.95
CDH20-202ENST00000536675 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
CDH20-202ENST00000536675 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
CDH20-202ENST00000536675 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
CDH20-202ENST00000536675 CUX2O14529 1486 aa20.9■□□□□ 0.94
CDH20-202ENST00000536675 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
CDH20-202ENST00000536675 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
CDH20-202ENST00000536675 ANP32EQ9BTT0 268 aa20.88■□□□□ 0.93
CDH20-202ENST00000536675 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
CDH20-202ENST00000536675 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
CDH20-202ENST00000536675 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
CDH20-202ENST00000536675 MAPKBP1O60336 1514 aa20.75■□□□□ 0.91
CDH20-202ENST00000536675 ITGAEP38570 1179 aa20.75■□□□□ 0.91
CDH20-202ENST00000536675 BCANQ96GW7 911 aa20.74■□□□□ 0.91
CDH20-202ENST00000536675 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
CDH20-202ENST00000536675 FKBP8Q14318 412 aa20.7■□□□□ 0.9
CDH20-202ENST00000536675 ARHGAP35Q9NRY4 1499 aa20.7■□□□□ 0.9
CDH20-202ENST00000536675 WDR97A6NE52 1622 aa20.65■□□□□ 0.9
CDH20-202ENST00000536675 CUX1P39880 1505 aa20.65■□□□□ 0.9
CDH20-202ENST00000536675 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
CDH20-202ENST00000536675 KIF27Q86VH2 1401 aa20.64■□□□□ 0.89
CDH20-202ENST00000536675 SETD5Q9C0A6 1442 aa20.59■□□□□ 0.89
CDH20-202ENST00000536675 PPP1R15AO75807 674 aaPredicted RBP20.58■□□□□ 0.88
CDH20-202ENST00000536675 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
CDH20-202ENST00000536675 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms