RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 MINK1Q8N4C8 1332 aaPredicted RBP28.64■■■□□ 2.18
PDXDC1-205ENST00000535621 DIP2AQ14689 1571 aa28.63■■■□□ 2.17
PDXDC1-205ENST00000535621 RALBP1Q15311 655 aa28.63■■■□□ 2.17
PDXDC1-205ENST00000535621 TBX22Q9Y458 520 aa28.63■■■□□ 2.17
PDXDC1-205ENST00000535621 CPS1P31327 1500 aa28.62■■■□□ 2.17
PDXDC1-205ENST00000535621 MRS2Q9HD23 443 aa28.62■■■□□ 2.17
PDXDC1-205ENST00000535621 ROBO2Q9HCK4 1378 aa28.61■■■□□ 2.17
PDXDC1-205ENST00000535621 TECPR2O15040 1411 aa28.61■■■□□ 2.17
PDXDC1-205ENST00000535621 PARD3Q8TEW0 1356 aa28.6■■■□□ 2.17
PDXDC1-205ENST00000535621 NPHP4O75161 1426 aaPredicted RBP28.58■■■□□ 2.17
PDXDC1-205ENST00000535621 LMTK3Q96Q04 1460 aa28.58■■■□□ 2.17
PDXDC1-205ENST00000535621 EVC2Q86UK5 1308 aa28.57■■■□□ 2.16
PDXDC1-205ENST00000535621 PUS7Q96PZ0 661 aaKnown RBP28.57■■■□□ 2.16
PDXDC1-205ENST00000535621 AMOTL2Q9Y2J4 779 aa28.57■■■□□ 2.16
PDXDC1-205ENST00000535621 XRN1Q8IZH2 1706 aaKnown RBP28.56■■■□□ 2.16
PDXDC1-205ENST00000535621 MYBBP1AQ9BQG0 1328 aaKnown RBP28.55■■■□□ 2.16
PDXDC1-205ENST00000535621 CABP2Q9NPB3 220 aa28.55■■■□□ 2.16
PDXDC1-205ENST00000535621 KNSTRNQ9Y448 316 aa28.55■■■□□ 2.16
PDXDC1-205ENST00000535621 CHD2O14647 1828 aaKnown RBP28.53■■■□□ 2.16
PDXDC1-205ENST00000535621 CC2D1BQ5T0F9 858 aaKnown RBP28.53■■■□□ 2.16
PDXDC1-205ENST00000535621 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.53■■■□□ 2.16
PDXDC1-205ENST00000535621 FAM135BQ49AJ0 1406 aa28.52■■■□□ 2.16
PDXDC1-205ENST00000535621 AMER1Q5JTC6 1135 aaPredicted RBP28.51■■■□□ 2.15
PDXDC1-205ENST00000535621 KCNA6P17658 529 aa28.5■■■□□ 2.15
PDXDC1-205ENST00000535621 BRD4O60885 1362 aaPredicted RBP28.49■■■□□ 2.15
PDXDC1-205ENST00000535621 NPC1L1Q9UHC9 1359 aa28.47■■■□□ 2.15
PDXDC1-205ENST00000535621 SRPK2P78362 688 aaKnown RBP28.47■■■□□ 2.15
PDXDC1-205ENST00000535621 SIRT1Q96EB6 747 aa28.47■■■□□ 2.15
PDXDC1-205ENST00000535621 FAM9BQ8IZU0 186 aa28.47■■■□□ 2.15
PDXDC1-205ENST00000535621 CDK19Q9BWU1 502 aa28.47■■■□□ 2.15
PDXDC1-205ENST00000535621 CARD14Q9BXL6 1004 aa28.47■■■□□ 2.15
PDXDC1-205ENST00000535621 SLC12A5Q9H2X9 1139 aa28.47■■■□□ 2.15
PDXDC1-205ENST00000535621 STRCQ7RTU9 1775 aa28.46■■■□□ 2.15
PDXDC1-205ENST00000535621 TMC1Q8TDI8 760 aa28.45■■■□□ 2.15
PDXDC1-205ENST00000535621 PTCH1Q13635 1447 aa28.45■■■□□ 2.14
PDXDC1-205ENST00000535621 NLRP13Q86W25 1043 aa28.45■■■□□ 2.14
PDXDC1-205ENST00000535621 PIK3R4Q99570 1358 aa28.44■■■□□ 2.14
PDXDC1-205ENST00000535621 RBM33Q96EV2 1170 aaKnown RBP28.42■■■□□ 2.14
PDXDC1-205ENST00000535621 PNISRQ8TF01 805 aaKnown RBP28.4■■■□□ 2.14
PDXDC1-205ENST00000535621 HNRNPUQ00839 825 aaKnown RBP eCLIP28.4■■■□□ 2.14
PDXDC1-205ENST00000535621 WASLO00401 505 aaPredicted RBP28.39■■■□□ 2.14
PDXDC1-205ENST00000535621 ATAD2Q6PL18 1390 aa28.39■■■□□ 2.13
PDXDC1-205ENST00000535621 NINLQ9Y2I6 1382 aa28.39■■■□□ 2.13
PDXDC1-205ENST00000535621 ADGRB2O60241 1585 aa28.38■■■□□ 2.13
PDXDC1-205ENST00000535621 ANKRD36BQ8N2N9 1353 aa28.37■■■□□ 2.13
PDXDC1-205ENST00000535621 STRCP1A6NGW2 1772 aa28.36■■■□□ 2.13
PDXDC1-205ENST00000535621 NSD3Q9BZ95 1437 aa28.36■■■□□ 2.13
PDXDC1-205ENST00000535621 NALCNQ8IZF0 1738 aa28.34■■■□□ 2.13
PDXDC1-205ENST00000535621 NWD1Q149M9 1564 aa28.33■■■□□ 2.13
PDXDC1-205ENST00000535621 NUTM2FA1L443 756 aa28.33■■■□□ 2.13
PDXDC1-205ENST00000535621 USP32Q8NFA0 1604 aa28.33■■■□□ 2.13
PDXDC1-205ENST00000535621 PRR36Q9H6K5 1346 aa28.32■■■□□ 2.12
PDXDC1-205ENST00000535621 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
PDXDC1-205ENST00000535621 PPP2R1AP30153 589 aa28.31■■■□□ 2.12
PDXDC1-205ENST00000535621 RGPD8O14715 1765 aaPredicted RBP28.31■■■□□ 2.12
PDXDC1-205ENST00000535621 CABP1Q9NZU7 370 aa28.3■■■□□ 2.12
PDXDC1-205ENST00000535621 CD163L1Q9NR16 1453 aa28.3■■■□□ 2.12
PDXDC1-205ENST00000535621 ATP7BP35670 1465 aa28.29■■■□□ 2.12
PDXDC1-205ENST00000535621 A0A1W2PP64 1363 aa28.29■■■□□ 2.12
PDXDC1-205ENST00000535621 NUDT16Q96DE0 195 aaKnown RBP28.28■■■□□ 2.12
PDXDC1-205ENST00000535621 GTF3C3Q9Y5Q9 886 aa28.26■■■□□ 2.12
PDXDC1-205ENST00000535621 PPIP5K1Q6PFW1 1433 aa28.25■■■□□ 2.11
PDXDC1-205ENST00000535621 CGNL1Q0VF96 1302 aa28.25■■■□□ 2.11
PDXDC1-205ENST00000535621 TOPAZ1Q8N9V7 1692 aa28.24■■■□□ 2.11
PDXDC1-205ENST00000535621 TERF2IPQ9NYB0 399 aa28.24■■■□□ 2.11
PDXDC1-205ENST00000535621 FMN2Q9NZ56 1722 aa28.22■■■□□ 2.11
PDXDC1-205ENST00000535621 ZBED9Q6R2W3 1325 aa28.22■■■□□ 2.11
PDXDC1-205ENST00000535621 PROSER2Q86WR7 435 aaPredicted RBP28.19■■■□□ 2.1
PDXDC1-205ENST00000535621 CCDC61Q9Y6R9 512 aa28.19■■■□□ 2.1
PDXDC1-205ENST00000535621 NSD2O96028 1365 aa28.19■■■□□ 2.1
PDXDC1-205ENST00000535621 ADGRL3Q9HAR2 1447 aa28.18■■■□□ 2.1
PDXDC1-205ENST00000535621 NKTRP30414 1462 aaKnown RBP28.18■■■□□ 2.1
PDXDC1-205ENST00000535621 ITSN1Q15811 1721 aa28.17■■■□□ 2.1
PDXDC1-205ENST00000535621 CDC42BPGQ6DT37 1551 aa28.17■■■□□ 2.1
PDXDC1-205ENST00000535621 HDGFL2Q7Z4V5 671 aaPredicted RBP28.17■■■□□ 2.1
PDXDC1-205ENST00000535621 MORC1Q86VD1 984 aa28.16■■■□□ 2.1
PDXDC1-205ENST00000535621 AKAP12Q02952 1782 aa28.16■■■□□ 2.1
PDXDC1-205ENST00000535621 C14orf37Q86TY3 774 aa28.16■■■□□ 2.1
PDXDC1-205ENST00000535621 ZNF335Q9H4Z2 1342 aaPredicted RBP28.14■■■□□ 2.09
PDXDC1-205ENST00000535621 INSRP06213 1382 aa28.14■■■□□ 2.09
PDXDC1-205ENST00000535621 CPSF1Q10570 1443 aaKnown RBP28.13■■■□□ 2.09
PDXDC1-205ENST00000535621 MON2Q7Z3U7 1717 aa28.13■■■□□ 2.09
PDXDC1-205ENST00000535621 XIRP1Q702N8 1843 aaKnown RBP28.13■■■□□ 2.09
PDXDC1-205ENST00000535621 TMEM94Q12767 1356 aa28.12■■■□□ 2.09
PDXDC1-205ENST00000535621 PMFBP1Q8TBY8 1022 aa28.11■■■□□ 2.09
PDXDC1-205ENST00000535621 KIF20BQ96Q89 1820 aa28.1■■■□□ 2.09
PDXDC1-205ENST00000535621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.09■■■□□ 2.09
PDXDC1-205ENST00000535621 ACEP12821 1306 aa28.08■■■□□ 2.09
PDXDC1-205ENST00000535621 FYB1O15117 783 aa28.08■■■□□ 2.09
PDXDC1-205ENST00000535621 BLMP54132 1417 aaPredicted RBP28.08■■■□□ 2.09
PDXDC1-205ENST00000535621 ANKRD26Q9UPS8 1709 aa28.07■■■□□ 2.08
PDXDC1-205ENST00000535621 TNNT2P45379 298 aaPredicted RBP28.07■■■□□ 2.08
PDXDC1-205ENST00000535621 GGNBP2Q9H3C7 697 aa28.06■■■□□ 2.08
PDXDC1-205ENST00000535621 ANKARQ7Z5J8 1434 aa28.06■■■□□ 2.08
PDXDC1-205ENST00000535621 POLR3AO14802 1390 aaPredicted RBP28.06■■■□□ 2.08
PDXDC1-205ENST00000535621 PLEKHG3A1L390 1219 aa28.06■■■□□ 2.08
PDXDC1-205ENST00000535621 ADAMTS8Q9UP79 889 aa28.06■■■□□ 2.08
PDXDC1-205ENST00000535621 NRKQ7Z2Y5 1582 aa28.04■■■□□ 2.08
PDXDC1-205ENST00000535621 WDR43Q15061 677 aaKnown RBP eCLIP28.04■■■□□ 2.08
PDXDC1-205ENST00000535621 EDC4Q6P2E9 1401 aaKnown RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms