RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PPP4R2Q9NY27 417 aa37.92■■■■□ 3.66
SAMD1-202ENST00000533683 USP32Q8NFA0 1604 aa37.91■■■■□ 3.66
SAMD1-202ENST00000533683 POGKQ9P215 609 aa37.9■■■■□ 3.66
SAMD1-202ENST00000533683 ANKRD36BQ8N2N9 1353 aa37.9■■■■□ 3.66
SAMD1-202ENST00000533683 MINK1Q8N4C8 1332 aaPredicted RBP37.88■■■■□ 3.65
SAMD1-202ENST00000533683 SETD1AO15047 1707 aaKnown RBP37.87■■■■□ 3.65
SAMD1-202ENST00000533683 MORC1Q86VD1 984 aa37.86■■■■□ 3.65
SAMD1-202ENST00000533683 CDCA7LQ96GN5 454 aa37.86■■■■□ 3.65
SAMD1-202ENST00000533683 TNRQ92752 1358 aa37.86■■■■□ 3.65
SAMD1-202ENST00000533683 SRPK2P78362 688 aaKnown RBP37.86■■■■□ 3.65
SAMD1-202ENST00000533683 CGNL1Q0VF96 1302 aa37.85■■■■□ 3.65
SAMD1-202ENST00000533683 TSHZ2Q9NRE2 1034 aa37.84■■■■□ 3.65
SAMD1-202ENST00000533683 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.83■■■■□ 3.658e-8■□□□□ 9.1
SAMD1-202ENST00000533683 NINLQ9Y2I6 1382 aa37.83■■■■□ 3.65
SAMD1-202ENST00000533683 POLR3AO14802 1390 aaPredicted RBP37.8■■■■□ 3.64
SAMD1-202ENST00000533683 NRXN3Q9Y4C0 1643 aa37.8■■■■□ 3.64
SAMD1-202ENST00000533683 DLC1Q96QB1 1528 aa37.8■■■■□ 3.64
SAMD1-202ENST00000533683 ATAD2Q6PL18 1390 aa37.79■■■■□ 3.64
SAMD1-202ENST00000533683 TNNT2P45379 298 aaPredicted RBP37.76■■■■□ 3.63
SAMD1-202ENST00000533683 RCAN3Q9UKA8 241 aa37.76■■■■□ 3.63
SAMD1-202ENST00000533683 A0A1W2PP64 1363 aa37.76■■■■□ 3.63
SAMD1-202ENST00000533683 PLEKHH1Q9ULM0 1364 aa37.76■■■■□ 3.63
SAMD1-202ENST00000533683 NSD2O96028 1365 aa37.74■■■■□ 3.63
SAMD1-202ENST00000533683 ABCC11Q96J66 1382 aa37.74■■■■□ 3.63
SAMD1-202ENST00000533683 CDK19Q9BWU1 502 aa37.72■■■■□ 3.63
SAMD1-202ENST00000533683 UBR1Q8IWV7 1749 aa37.72■■■■□ 3.63
SAMD1-202ENST00000533683 HDGFP51858 240 aaKnown RBP37.72■■■■□ 3.63
SAMD1-202ENST00000533683 WAPLQ7Z5K2 1190 aa37.72■■■■□ 3.63
SAMD1-202ENST00000533683 CCDC146Q8IYE0 955 aa37.72■■■■□ 3.63
SAMD1-202ENST00000533683 ZNF521Q96K83 1311 aa37.7■■■■□ 3.63
SAMD1-202ENST00000533683 METP08581 1390 aa37.7■■■■□ 3.63
SAMD1-202ENST00000533683 B4GALNT3Q6L9W6 998 aa37.69■■■■□ 3.62
SAMD1-202ENST00000533683 TMEM2Q9UHN6 1383 aa37.68■■■■□ 3.62
SAMD1-202ENST00000533683 CD163L1Q9NR16 1453 aa37.67■■■■□ 3.62
SAMD1-202ENST00000533683 RRP1P56182 461 aaKnown RBP37.67■■■■□ 3.62
SAMD1-202ENST00000533683 TERF2IPQ9NYB0 399 aa37.67■■■■□ 3.62
SAMD1-202ENST00000533683 SHPRHQ149N8 1683 aa37.65■■■■□ 3.62
SAMD1-202ENST00000533683 MTHFSP49914 203 aa37.63■■■■□ 3.62
SAMD1-202ENST00000533683 APAF1O14727 1248 aa37.63■■■■□ 3.61
SAMD1-202ENST00000533683 CEBPAP49715 358 aaPredicted RBP37.63■■■■□ 3.61
SAMD1-202ENST00000533683 TRHP20396 242 aaPredicted RBP37.61■■■■□ 3.61
SAMD1-202ENST00000533683 NLRP1Q9C000 1473 aa37.59■■■■□ 3.61
SAMD1-202ENST00000533683 CABP1Q9NZU7 370 aa37.59■■■■□ 3.61
SAMD1-202ENST00000533683 GOLGA2Q08379 1002 aa37.58■■■■□ 3.61
SAMD1-202ENST00000533683 HDGFL2Q7Z4V5 671 aaPredicted RBP37.56■■■■□ 3.6
SAMD1-202ENST00000533683 DUSP27Q5VZP5 1158 aa37.56■■■■□ 3.6
SAMD1-202ENST00000533683 TXNDC2Q86VQ3 553 aa37.56■■■■□ 3.6
SAMD1-202ENST00000533683 KNDC1Q76NI1 1749 aa37.55■■■■□ 3.6
SAMD1-202ENST00000533683 C3P01024 1663 aa37.55■■■■□ 3.6
SAMD1-202ENST00000533683 CFAP53Q96M91 514 aa37.55■■■■□ 3.6
SAMD1-202ENST00000533683 GGNBP2Q9H3C7 697 aa37.55■■■■□ 3.6
SAMD1-202ENST00000533683 TECPR2O15040 1411 aa37.54■■■■□ 3.6
SAMD1-202ENST00000533683 FYB1O15117 783 aa37.54■■■■□ 3.6
SAMD1-202ENST00000533683 SIRT1Q96EB6 747 aa37.52■■■■□ 3.6
SAMD1-202ENST00000533683 FAM135BQ49AJ0 1406 aa37.52■■■■□ 3.6
SAMD1-202ENST00000533683 MED14O60244 1454 aa37.51■■■■□ 3.6
SAMD1-202ENST00000533683 NGEFQ8N5V2 710 aa37.51■■■■□ 3.6
SAMD1-202ENST00000533683 ANKRD26Q9UPS8 1709 aa37.51■■■■□ 3.6
SAMD1-202ENST00000533683 LTKP29376 864 aa37.51■■■■□ 3.59
SAMD1-202ENST00000533683 ADAMTS13Q76LX8 1427 aa37.5■■■■□ 3.59
SAMD1-202ENST00000533683 SLFN5Q08AF3 891 aa37.5■■■■□ 3.59
SAMD1-202ENST00000533683 FER1L4A9Z1Z3 1794 aa37.5■■■■□ 3.59
SAMD1-202ENST00000533683 WASLO00401 505 aaPredicted RBP37.49■■■■□ 3.59
SAMD1-202ENST00000533683 CPS1P31327 1500 aa37.48■■■■□ 3.59
SAMD1-202ENST00000533683 PLEKHG1Q9ULL1 1385 aa37.47■■■■□ 3.59
SAMD1-202ENST00000533683 ATP7BP35670 1465 aa37.47■■■■□ 3.59
SAMD1-202ENST00000533683 TRMT2AQ8IZ69 625 aaKnown RBP37.46■■■■□ 3.59
SAMD1-202ENST00000533683 CCDC136Q96JN2 1154 aa37.45■■■■□ 3.59
SAMD1-202ENST00000533683 RUNDC1Q96C34 613 aa37.44■■■■□ 3.58
SAMD1-202ENST00000533683 SPINK5Q9NQ38 1064 aaPredicted RBP37.43■■■■□ 3.58
SAMD1-202ENST00000533683 PLPPR3Q6T4P5 718 aa37.42■■■■□ 3.58
SAMD1-202ENST00000533683 EXOC6Q8TAG9 804 aa37.42■■■■□ 3.58
SAMD1-202ENST00000533683 KIF20BQ96Q89 1820 aa37.42■■■■□ 3.58
SAMD1-202ENST00000533683 PLIN1O60240 522 aa37.39■■■■□ 3.58
SAMD1-202ENST00000533683 ROBO2Q9HCK4 1378 aa37.39■■■■□ 3.58
SAMD1-202ENST00000533683 PPIP5K1Q6PFW1 1433 aa37.38■■■■□ 3.57
SAMD1-202ENST00000533683 IQSEC2Q5JU85 1478 aa37.38■■■■□ 3.57
SAMD1-202ENST00000533683 SLIT1O75093 1534 aa37.37■■■■□ 3.57
SAMD1-202ENST00000533683 DMRT2Q9Y5R5 561 aa37.37■■■■□ 3.57
SAMD1-202ENST00000533683 EID1Q9Y6B2 187 aa37.37■■■■□ 3.57
SAMD1-202ENST00000533683 E9PSI1 815 aa37.36■■■■□ 3.57
SAMD1-202ENST00000533683 WWC1Q8IX03 1113 aa37.36■■■■□ 3.57
SAMD1-202ENST00000533683 CPSF1Q10570 1443 aaKnown RBP37.36■■■■□ 3.57
SAMD1-202ENST00000533683 ARHGAP23Q9P227 1491 aa37.36■■■■□ 3.57
SAMD1-202ENST00000533683 TCP11L2Q8N4U5 519 aa37.35■■■■□ 3.57
SAMD1-202ENST00000533683 NUDT16Q96DE0 195 aaKnown RBP37.35■■■■□ 3.57
SAMD1-202ENST00000533683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.35■■■■□ 3.57
SAMD1-202ENST00000533683 COL3A1P02461 1466 aaPredicted RBP37.34■■■■□ 3.57
SAMD1-202ENST00000533683 U2AF1L5P0DN76 240 aaPredicted RBP37.34■■■■□ 3.57
SAMD1-202ENST00000533683 U2AF1Q01081 240 aaKnown RBP eCLIP37.34■■■■□ 3.57
SAMD1-202ENST00000533683 NKTRP30414 1462 aaKnown RBP37.31■■■■□ 3.56
SAMD1-202ENST00000533683 SLC26A8Q96RN1 970 aa37.31■■■■□ 3.56
SAMD1-202ENST00000533683 RRP7AQ9Y3A4 280 aaKnown RBP37.31■■■■□ 3.56
SAMD1-202ENST00000533683 RBM19Q9Y4C8 960 aaKnown RBP37.31■■■■□ 3.56
SAMD1-202ENST00000533683 CCDC61Q9Y6R9 512 aa37.31■■■■□ 3.56
SAMD1-202ENST00000533683 NEUROD2Q15784 382 aa37.29■■■■□ 3.56
SAMD1-202ENST00000533683 EDC4Q6P2E9 1401 aaKnown RBP37.29■■■■□ 3.56
SAMD1-202ENST00000533683 NCKAP5LQ9HCH0 1330 aa37.29■■■■□ 3.56
SAMD1-202ENST00000533683 PHF23Q9BUL5 403 aaPredicted RBP37.28■■■■□ 3.56
SAMD1-202ENST00000533683 THEMISQ8N1K5 641 aaPredicted RBP37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms