RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 NHSL1Q5SYE7 1610 aa19.59■□□□□ 0.73
COPB1-209ENST00000533096 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
COPB1-209ENST00000533096 GJD4Q96KN9 370 aaPredicted RBP19.59■□□□□ 0.73
COPB1-209ENST00000533096 ADGRF5Q8IZF2 1346 aa19.57■□□□□ 0.72
COPB1-209ENST00000533096 CLTCL1P53675 1640 aa19.57■□□□□ 0.72
COPB1-209ENST00000533096 HAP1P54257 671 aaPredicted RBP19.56■□□□□ 0.72
COPB1-209ENST00000533096 NAIPQ13075 1403 aa19.56■□□□□ 0.72
COPB1-209ENST00000533096 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
COPB1-209ENST00000533096 SPHKAPQ2M3C7 1700 aa19.56■□□□□ 0.72
COPB1-209ENST00000533096 CCDC125Q86Z20 511 aa19.55■□□□□ 0.72
COPB1-209ENST00000533096 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
COPB1-209ENST00000533096 ATRNO75882 1429 aa19.54■□□□□ 0.72
COPB1-209ENST00000533096 LMOD2Q6P5Q4 547 aa19.53■□□□□ 0.72
COPB1-209ENST00000533096 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
COPB1-209ENST00000533096 NALCNQ8IZF0 1738 aa19.53■□□□□ 0.72
COPB1-209ENST00000533096 UNC5CLQ8IV45 518 aa19.52■□□□□ 0.72
COPB1-209ENST00000533096 CCDC9Q9Y3X0 531 aaKnown RBP19.52■□□□□ 0.72
COPB1-209ENST00000533096 LRPPRCP42704 1394 aaKnown RBP19.52■□□□□ 0.72
COPB1-209ENST00000533096 CABLES1Q8TDN4 633 aa19.51■□□□□ 0.71
COPB1-209ENST00000533096 BCL9LQ86UU0 1499 aa19.51■□□□□ 0.71
COPB1-209ENST00000533096 PLEKHH1Q9ULM0 1364 aa19.48■□□□□ 0.71
COPB1-209ENST00000533096 SF3B2Q13435 895 aaKnown RBP19.48■□□□□ 0.71
COPB1-209ENST00000533096 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
COPB1-209ENST00000533096 DEFB132Q7Z7B7 95 aa19.48■□□□□ 0.71
COPB1-209ENST00000533096 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
COPB1-209ENST00000533096 SEPT12Q8IYM1 358 aa19.46■□□□□ 0.71
COPB1-209ENST00000533096 MPHOSPH9Q99550 1183 aa19.46■□□□□ 0.71
COPB1-209ENST00000533096 A0A0G2JS52 829 aa19.45■□□□□ 0.7
COPB1-209ENST00000533096 MYT1Q01538 1121 aa19.45■□□□□ 0.7
COPB1-209ENST00000533096 PSME1Q06323 249 aa19.45■□□□□ 0.7
COPB1-209ENST00000533096 PHF8Q9UPP1 1060 aa19.45■□□□□ 0.7
COPB1-209ENST00000533096 MYOM2P54296 1465 aa19.45■□□□□ 0.7
COPB1-209ENST00000533096 RRBP1Q9P2E9 1410 aaKnown RBP19.44■□□□□ 0.7
COPB1-209ENST00000533096 PXDNQ92626 1479 aa19.43■□□□□ 0.7
COPB1-209ENST00000533096 KIF1BO60333 1816 aa19.43■□□□□ 0.7
COPB1-209ENST00000533096 ABCC11Q96J66 1382 aa19.42■□□□□ 0.7
COPB1-209ENST00000533096 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
COPB1-209ENST00000533096 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
COPB1-209ENST00000533096 PMFBP1Q8TBY8 1022 aa19.41■□□□□ 0.7
COPB1-209ENST00000533096 VPS72Q15906 364 aa19.39■□□□□ 0.69
COPB1-209ENST00000533096 POGKQ9P215 609 aa19.39■□□□□ 0.69
COPB1-209ENST00000533096 ANKRD30BQ9BXX2 1392 aa19.39■□□□□ 0.69
COPB1-209ENST00000533096 PRAG1Q86YV5 1406 aa19.39■□□□□ 0.69
COPB1-209ENST00000533096 RALGAPBQ86X10 1494 aa19.39■□□□□ 0.69
COPB1-209ENST00000533096 LAMC1P11047 1609 aa19.39■□□□□ 0.69
COPB1-209ENST00000533096 FAM83GA6ND36 823 aa19.38■□□□□ 0.69
COPB1-209ENST00000533096 KRT27Q7Z3Y8 459 aa19.38■□□□□ 0.69
COPB1-209ENST00000533096 PRAM1Q96QH2 718 aa19.38■□□□□ 0.69
COPB1-209ENST00000533096 C14orf93Q9H972 538 aaKnown RBP19.38■□□□□ 0.69
COPB1-209ENST00000533096 SIRT1Q96EB6 747 aa19.37■□□□□ 0.69
COPB1-209ENST00000533096 BLMP54132 1417 aaPredicted RBP19.36■□□□□ 0.69
COPB1-209ENST00000533096 PSDA5PKW4 1024 aaPredicted RBP19.36■□□□□ 0.69
COPB1-209ENST00000533096 YTHDC2Q9H6S0 1430 aaKnown RBP19.35■□□□□ 0.69
COPB1-209ENST00000533096 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
COPB1-209ENST00000533096 COL22A1Q8NFW1 1626 aaPredicted RBP19.34■□□□□ 0.69
COPB1-209ENST00000533096 FAM98CQ17RN3 349 aaKnown RBP19.34■□□□□ 0.69
COPB1-209ENST00000533096 CDC42BPGQ6DT37 1551 aa19.34■□□□□ 0.69
COPB1-209ENST00000533096 SLIT2O94813 1529 aa19.34■□□□□ 0.69
COPB1-209ENST00000533096 ONECUT3O60422 494 aaPredicted RBP19.33■□□□□ 0.68
COPB1-209ENST00000533096 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.68
COPB1-209ENST00000533096 SPATA31E1Q6ZUB1 1445 aa19.33■□□□□ 0.68
COPB1-209ENST00000533096 FAM182BQ5T319 152 aa19.32■□□□□ 0.68
COPB1-209ENST00000533096 BTG4Q9NY30 223 aa19.32■□□□□ 0.68
COPB1-209ENST00000533096 TECPR2O15040 1411 aa19.32■□□□□ 0.68
COPB1-209ENST00000533096 TRAK1Q9UPV9 953 aa19.31■□□□□ 0.68
COPB1-209ENST00000533096 SRCAPQ6ZRS2 3230 aa19.3■□□□□ 0.68
COPB1-209ENST00000533096 BAG6P46379 1132 aa19.3■□□□□ 0.68
COPB1-209ENST00000533096 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
COPB1-209ENST00000533096 PAK3O75914 559 aaPredicted RBP19.29■□□□□ 0.68
COPB1-209ENST00000533096 TNS3Q68CZ2 1445 aa19.28■□□□□ 0.68
COPB1-209ENST00000533096 EN1Q05925 392 aaPredicted RBP19.28■□□□□ 0.68
COPB1-209ENST00000533096 PPLO60437 1756 aa19.28■□□□□ 0.68
COPB1-209ENST00000533096 GLI3P10071 1580 aa19.27■□□□□ 0.68
COPB1-209ENST00000533096 MINK1Q8N4C8 1332 aaPredicted RBP19.27■□□□□ 0.68
COPB1-209ENST00000533096 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
COPB1-209ENST00000533096 SBNO1A3KN83 1393 aa19.27■□□□□ 0.68
COPB1-209ENST00000533096 NGDNQ8NEJ9 315 aaKnown RBP19.26■□□□□ 0.67
COPB1-209ENST00000533096 ARHGEF10O15013 1369 aa19.26■□□□□ 0.67
COPB1-209ENST00000533096 GPRASP1Q5JY77 1395 aa19.23■□□□□ 0.67
COPB1-209ENST00000533096 HRCP23327 699 aa19.23■□□□□ 0.67
COPB1-209ENST00000533096 R3HDM1Q15032 1099 aaKnown RBP19.23■□□□□ 0.67
COPB1-209ENST00000533096 NUTM2GQ5VZR2 741 aa19.2■□□□□ 0.66
COPB1-209ENST00000533096 DCAF11Q8TEB1 546 aa19.2■□□□□ 0.66
COPB1-209ENST00000533096 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
COPB1-209ENST00000533096 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
COPB1-209ENST00000533096 USP32Q8NFA0 1604 aa19.19■□□□□ 0.66
COPB1-209ENST00000533096 WASLO00401 505 aaPredicted RBP19.19■□□□□ 0.66
COPB1-209ENST00000533096 CHRNA2Q15822 529 aa19.19■□□□□ 0.66
COPB1-209ENST00000533096 USP35Q9P2H5 1018 aa19.19■□□□□ 0.66
COPB1-209ENST00000533096 NRXN1Q9ULB1 1477 aa19.19■□□□□ 0.66
COPB1-209ENST00000533096 PRR36Q9H6K5 1346 aa19.19■□□□□ 0.66
COPB1-209ENST00000533096 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
COPB1-209ENST00000533096 FMN2Q9NZ56 1722 aa19.18■□□□□ 0.66
COPB1-209ENST00000533096 SPATA31A5Q5VU36 1347 aa19.18■□□□□ 0.66
COPB1-209ENST00000533096 SPATA31A7Q8IWB4 1347 aa19.18■□□□□ 0.66
COPB1-209ENST00000533096 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
COPB1-209ENST00000533096 TRIM37O94972 964 aa19.17■□□□□ 0.66
COPB1-209ENST00000533096 EVA1CP58658 441 aa19.17■□□□□ 0.66
COPB1-209ENST00000533096 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
COPB1-209ENST00000533096 EZH2Q15910 746 aaKnown RBP19.17■□□□□ 0.66
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