RNA–Protein interactions for RNA: ENST00000530295.5

NDUFS3-208, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 3

Gene NDUFS3, Length 253 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-208ENST00000530295 LAMC1P11047 1609 aa22.9■■□□□ 1.26
NDUFS3-208ENST00000530295 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
NDUFS3-208ENST00000530295 XPCQ01831 940 aaPredicted RBP22.89■■□□□ 1.25
NDUFS3-208ENST00000530295 NPHP3Q7Z494 1330 aa22.85■■□□□ 1.25
NDUFS3-208ENST00000530295 FOXO3O43524 673 aa22.85■■□□□ 1.25
NDUFS3-208ENST00000530295 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
NDUFS3-208ENST00000530295 NUTM2FA1L443 756 aa22.84■■□□□ 1.25
NDUFS3-208ENST00000530295 BLMP54132 1417 aaPredicted RBP22.83■■□□□ 1.25
NDUFS3-208ENST00000530295 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
NDUFS3-208ENST00000530295 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
NDUFS3-208ENST00000530295 COL22A1Q8NFW1 1626 aaPredicted RBP22.82■■□□□ 1.24
NDUFS3-208ENST00000530295 MYOM2P54296 1465 aa22.82■■□□□ 1.24
NDUFS3-208ENST00000530295 GJD4Q96KN9 370 aaPredicted RBP22.82■■□□□ 1.24
NDUFS3-208ENST00000530295 BCL9LQ86UU0 1499 aa22.81■■□□□ 1.24
NDUFS3-208ENST00000530295 STK26Q9P289 416 aa22.81■■□□□ 1.24
NDUFS3-208ENST00000530295 MARF1Q9Y4F3 1742 aaKnown RBP22.79■■□□□ 1.24
NDUFS3-208ENST00000530295 NAIPQ13075 1403 aa22.78■■□□□ 1.24
NDUFS3-208ENST00000530295 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
NDUFS3-208ENST00000530295 PXDNQ92626 1479 aa22.78■■□□□ 1.24
NDUFS3-208ENST00000530295 BRWD3Q6RI45 1802 aa22.78■■□□□ 1.24
NDUFS3-208ENST00000530295 PRAG1Q86YV5 1406 aa22.77■■□□□ 1.24
NDUFS3-208ENST00000530295 PPLO60437 1756 aa22.77■■□□□ 1.24
NDUFS3-208ENST00000530295 WAPLQ7Z5K2 1190 aa22.77■■□□□ 1.24
NDUFS3-208ENST00000530295 PSDA5PKW4 1024 aaPredicted RBP22.75■■□□□ 1.23
NDUFS3-208ENST00000530295 CDC42BPGQ6DT37 1551 aa22.75■■□□□ 1.23
NDUFS3-208ENST00000530295 LRPPRCP42704 1394 aaKnown RBP22.75■■□□□ 1.23
NDUFS3-208ENST00000530295 UNC5CLQ8IV45 518 aa22.74■■□□□ 1.23
NDUFS3-208ENST00000530295 PLEKHG5O94827 1062 aa22.73■■□□□ 1.23
NDUFS3-208ENST00000530295 SF3B2Q13435 895 aaKnown RBP22.73■■□□□ 1.23
NDUFS3-208ENST00000530295 RGL3Q3MIN7 710 aa22.73■■□□□ 1.23
NDUFS3-208ENST00000530295 ADGRF5Q8IZF2 1346 aa22.73■■□□□ 1.23
NDUFS3-208ENST00000530295 GLI3P10071 1580 aa22.71■■□□□ 1.23
NDUFS3-208ENST00000530295 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
NDUFS3-208ENST00000530295 HRCP23327 699 aa22.7■■□□□ 1.22
NDUFS3-208ENST00000530295 HAP1P54257 671 aaPredicted RBP22.7■■□□□ 1.22
NDUFS3-208ENST00000530295 TMEM132EQ6IEE7 984 aa22.7■■□□□ 1.22
NDUFS3-208ENST00000530295 RALGAPBQ86X10 1494 aa22.7■■□□□ 1.22
NDUFS3-208ENST00000530295 PLEKHH1Q9ULM0 1364 aa22.68■■□□□ 1.22
NDUFS3-208ENST00000530295 SPATA31A3Q5VYP0 1347 aa22.68■■□□□ 1.22
NDUFS3-208ENST00000530295 KRT28Q7Z3Y7 464 aa22.68■■□□□ 1.22
NDUFS3-208ENST00000530295 CCDC9Q9Y3X0 531 aaKnown RBP22.67■■□□□ 1.22
NDUFS3-208ENST00000530295 RRBP1Q9P2E9 1410 aaKnown RBP22.66■■□□□ 1.22
NDUFS3-208ENST00000530295 SEPT12Q8IYM1 358 aa22.66■■□□□ 1.22
NDUFS3-208ENST00000530295 SLIT2O94813 1529 aa22.66■■□□□ 1.22
NDUFS3-208ENST00000530295 CABLES1Q8TDN4 633 aa22.65■■□□□ 1.22
NDUFS3-208ENST00000530295 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
NDUFS3-208ENST00000530295 TECPR2O15040 1411 aa22.63■■□□□ 1.21
NDUFS3-208ENST00000530295 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
NDUFS3-208ENST00000530295 YY1P25490 414 aa22.62■■□□□ 1.21
NDUFS3-208ENST00000530295 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
NDUFS3-208ENST00000530295 USP32Q8NFA0 1604 aa22.61■■□□□ 1.21
NDUFS3-208ENST00000530295 FMN2Q9NZ56 1722 aa22.61■■□□□ 1.21
NDUFS3-208ENST00000530295 A0A0G2JS52 829 aa22.6■■□□□ 1.21
NDUFS3-208ENST00000530295 MYT1Q01538 1121 aa22.6■■□□□ 1.21
NDUFS3-208ENST00000530295 PSME1Q06323 249 aa22.6■■□□□ 1.21
NDUFS3-208ENST00000530295 VPS72Q15906 364 aa22.6■■□□□ 1.21
NDUFS3-208ENST00000530295 PHF8Q9UPP1 1060 aa22.6■■□□□ 1.21
NDUFS3-208ENST00000530295 RGPD8O14715 1765 aaPredicted RBP22.6■■□□□ 1.21
NDUFS3-208ENST00000530295 KIF1AQ12756 1690 aa22.59■■□□□ 1.21
NDUFS3-208ENST00000530295 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
NDUFS3-208ENST00000530295 KRT27Q7Z3Y8 459 aa22.58■■□□□ 1.21
NDUFS3-208ENST00000530295 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
NDUFS3-208ENST00000530295 KNDC1Q76NI1 1749 aa22.57■■□□□ 1.2
NDUFS3-208ENST00000530295 TNS3Q68CZ2 1445 aa22.57■■□□□ 1.2
NDUFS3-208ENST00000530295 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
NDUFS3-208ENST00000530295 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
NDUFS3-208ENST00000530295 BAG6P46379 1132 aa22.55■■□□□ 1.2
NDUFS3-208ENST00000530295 IFT172Q9UG01 1749 aa22.54■■□□□ 1.2
NDUFS3-208ENST00000530295 PLCH1Q4KWH8 1693 aa22.53■■□□□ 1.2
NDUFS3-208ENST00000530295 FAM83GA6ND36 823 aa22.53■■□□□ 1.2
NDUFS3-208ENST00000530295 R3HDM1Q15032 1099 aaKnown RBP22.53■■□□□ 1.2
NDUFS3-208ENST00000530295 PIK3C2GO75747 1445 aa22.53■■□□□ 1.2
NDUFS3-208ENST00000530295 ONECUT3O60422 494 aaPredicted RBP22.52■■□□□ 1.2
NDUFS3-208ENST00000530295 PMFBP1Q8TBY8 1022 aa22.52■■□□□ 1.2
NDUFS3-208ENST00000530295 MPHOSPH9Q99550 1183 aa22.52■■□□□ 1.2
NDUFS3-208ENST00000530295 SIRT1Q96EB6 747 aa22.51■■□□□ 1.19
NDUFS3-208ENST00000530295 NWD2Q9ULI1 1742 aa22.51■■□□□ 1.19
NDUFS3-208ENST00000530295 FAM98CQ17RN3 349 aaKnown RBP22.5■■□□□ 1.19
NDUFS3-208ENST00000530295 SBNO1A3KN83 1393 aa22.5■■□□□ 1.19
NDUFS3-208ENST00000530295 CFAP70Q5T0N1 1121 aa22.49■■□□□ 1.19
NDUFS3-208ENST00000530295 PRAM1Q96QH2 718 aa22.49■■□□□ 1.19
NDUFS3-208ENST00000530295 C14orf93Q9H972 538 aaKnown RBP22.49■■□□□ 1.19
NDUFS3-208ENST00000530295 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
NDUFS3-208ENST00000530295 DHX57Q6P158 1386 aaKnown RBP22.48■■□□□ 1.19
NDUFS3-208ENST00000530295 RGPD1P0DJD0 1748 aa22.48■■□□□ 1.19
NDUFS3-208ENST00000530295 EN1Q05925 392 aaPredicted RBP22.47■■□□□ 1.19
NDUFS3-208ENST00000530295 POGKQ9P215 609 aa22.47■■□□□ 1.19
NDUFS3-208ENST00000530295 NRXN1Q9ULB1 1477 aa22.47■■□□□ 1.19
NDUFS3-208ENST00000530295 ABCA3Q99758 1704 aa22.46■■□□□ 1.19
NDUFS3-208ENST00000530295 BTG4Q9NY30 223 aa22.46■■□□□ 1.19
NDUFS3-208ENST00000530295 FAM182BQ5T319 152 aa22.45■■□□□ 1.18
NDUFS3-208ENST00000530295 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
NDUFS3-208ENST00000530295 TNS1Q9HBL0 1735 aaKnown RBP22.4■■□□□ 1.18
NDUFS3-208ENST00000530295 GPRASP1Q5JY77 1395 aa22.38■■□□□ 1.17
NDUFS3-208ENST00000530295 NRAPQ86VF7 1730 aa22.38■■□□□ 1.17
NDUFS3-208ENST00000530295 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
NDUFS3-208ENST00000530295 TRAK1Q9UPV9 953 aa22.37■■□□□ 1.17
NDUFS3-208ENST00000530295 ANKARQ7Z5J8 1434 aa22.37■■□□□ 1.17
NDUFS3-208ENST00000530295 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
NDUFS3-208ENST00000530295 IFFO2Q5TF58 517 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms