RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 NEFLP07196 543 aa22.5■■□□□ 1.19
CAPRIN1-207ENST00000529307 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
CAPRIN1-207ENST00000529307 PRAM1Q96QH2 718 aa22.5■■□□□ 1.19
CAPRIN1-207ENST00000529307 EVC2Q86UK5 1308 aa22.48■■□□□ 1.19
CAPRIN1-207ENST00000529307 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
CAPRIN1-207ENST00000529307 METP08581 1390 aa22.47■■□□□ 1.19
CAPRIN1-207ENST00000529307 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
CAPRIN1-207ENST00000529307 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
CAPRIN1-207ENST00000529307 LTKP29376 864 aa22.45■■□□□ 1.18
CAPRIN1-207ENST00000529307 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
CAPRIN1-207ENST00000529307 PUS7Q96PZ0 661 aaKnown RBP22.45■■□□□ 1.18
CAPRIN1-207ENST00000529307 POGKQ9P215 609 aa22.45■■□□□ 1.18
CAPRIN1-207ENST00000529307 MINK1Q8N4C8 1332 aaPredicted RBP22.45■■□□□ 1.18
CAPRIN1-207ENST00000529307 NPC1L1Q9UHC9 1359 aa22.45■■□□□ 1.18
CAPRIN1-207ENST00000529307 DLC1Q96QB1 1528 aa22.43■■□□□ 1.18
CAPRIN1-207ENST00000529307 ABCC11Q96J66 1382 aa22.42■■□□□ 1.18
CAPRIN1-207ENST00000529307 PLEKHH1Q9ULM0 1364 aa22.42■■□□□ 1.18
CAPRIN1-207ENST00000529307 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
CAPRIN1-207ENST00000529307 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
CAPRIN1-207ENST00000529307 PPP2R1AP30153 589 aa22.4■■□□□ 1.18
CAPRIN1-207ENST00000529307 ZBED9Q6R2W3 1325 aa22.4■■□□□ 1.18
CAPRIN1-207ENST00000529307 NSD3Q9BZ95 1437 aa22.39■■□□□ 1.17
CAPRIN1-207ENST00000529307 RIMS1Q86UR5 1692 aaKnown RBP22.38■■□□□ 1.17
CAPRIN1-207ENST00000529307 TXNDC2Q86VQ3 553 aa22.38■■□□□ 1.17
CAPRIN1-207ENST00000529307 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
CAPRIN1-207ENST00000529307 ARHGAP23Q9P227 1491 aa22.38■■□□□ 1.17
CAPRIN1-207ENST00000529307 SLIT1O75093 1534 aa22.37■■□□□ 1.17
CAPRIN1-207ENST00000529307 SRPK2P78362 688 aaKnown RBP22.37■■□□□ 1.17
CAPRIN1-207ENST00000529307 UBE2Q2Q8WVN8 375 aa22.37■■□□□ 1.17
CAPRIN1-207ENST00000529307 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
CAPRIN1-207ENST00000529307 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
CAPRIN1-207ENST00000529307 CDK19Q9BWU1 502 aa22.34■■□□□ 1.17
CAPRIN1-207ENST00000529307 ADAMTSL3P82987 1691 aa22.34■■□□□ 1.17
CAPRIN1-207ENST00000529307 ANKRD36BQ8N2N9 1353 aa22.34■■□□□ 1.17
CAPRIN1-207ENST00000529307 TECPR2O15040 1411 aa22.34■■□□□ 1.17
CAPRIN1-207ENST00000529307 MED14O60244 1454 aa22.33■■□□□ 1.16
CAPRIN1-207ENST00000529307 THEMISQ8N1K5 641 aaPredicted RBP22.32■■□□□ 1.16
CAPRIN1-207ENST00000529307 EID1Q9Y6B2 187 aa22.32■■□□□ 1.16
CAPRIN1-207ENST00000529307 ATAD2Q6PL18 1390 aa22.32■■□□□ 1.16
CAPRIN1-207ENST00000529307 KNDC1Q76NI1 1749 aa22.31■■□□□ 1.16
CAPRIN1-207ENST00000529307 SLC26A8Q96RN1 970 aa22.31■■□□□ 1.16
CAPRIN1-207ENST00000529307 A0A1W2PP64 1363 aa22.3■■□□□ 1.16
CAPRIN1-207ENST00000529307 CPS1P31327 1500 aa22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 FAM135BQ49AJ0 1406 aa22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 CD163L1Q9NR16 1453 aa22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 NINLQ9Y2I6 1382 aa22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 USP32Q8NFA0 1604 aa22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 ROBO2Q9HCK4 1378 aa22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 SIRT1Q96EB6 747 aa22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
CAPRIN1-207ENST00000529307 PTPRUQ92729 1446 aa22.27■■□□□ 1.16
CAPRIN1-207ENST00000529307 CGNL1Q0VF96 1302 aa22.26■■□□□ 1.15
CAPRIN1-207ENST00000529307 CABP1Q9NZU7 370 aa22.25■■□□□ 1.15
CAPRIN1-207ENST00000529307 WASLO00401 505 aaPredicted RBP22.24■■□□□ 1.15
CAPRIN1-207ENST00000529307 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
CAPRIN1-207ENST00000529307 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
CAPRIN1-207ENST00000529307 ADAMTS8Q9UP79 889 aa22.23■■□□□ 1.15
CAPRIN1-207ENST00000529307 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
CAPRIN1-207ENST00000529307 INSRP06213 1382 aa22.22■■□□□ 1.15
CAPRIN1-207ENST00000529307 TNNT2P45379 298 aaPredicted RBP22.21■■□□□ 1.15
CAPRIN1-207ENST00000529307 TERF2IPQ9NYB0 399 aa22.21■■□□□ 1.15
CAPRIN1-207ENST00000529307 NSD2O96028 1365 aa22.19■■□□□ 1.14
CAPRIN1-207ENST00000529307 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.18■■□□□ 1.14
CAPRIN1-207ENST00000529307 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
CAPRIN1-207ENST00000529307 NCKAP5LQ9HCH0 1330 aa22.18■■□□□ 1.14
CAPRIN1-207ENST00000529307 ZNF142P52746 1687 aaPredicted RBP22.17■■□□□ 1.14
CAPRIN1-207ENST00000529307 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
CAPRIN1-207ENST00000529307 HDGFL2Q7Z4V5 671 aaPredicted RBP22.16■■□□□ 1.14
CAPRIN1-207ENST00000529307 SMG6Q86US8 1419 aaKnown RBP22.16■■□□□ 1.14
CAPRIN1-207ENST00000529307 DIP2AQ14689 1571 aa22.16■■□□□ 1.14
CAPRIN1-207ENST00000529307 FYB1O15117 783 aa22.15■■□□□ 1.14
CAPRIN1-207ENST00000529307 NUDT16Q96DE0 195 aaKnown RBP22.15■■□□□ 1.14
CAPRIN1-207ENST00000529307 GGNBP2Q9H3C7 697 aa22.15■■□□□ 1.14
CAPRIN1-207ENST00000529307 ATP7BP35670 1465 aa22.15■■□□□ 1.14
CAPRIN1-207ENST00000529307 POLR3AO14802 1390 aaPredicted RBP22.15■■□□□ 1.14
CAPRIN1-207ENST00000529307 PRR36Q9H6K5 1346 aa22.15■■□□□ 1.14
CAPRIN1-207ENST00000529307 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.14
CAPRIN1-207ENST00000529307 ADGRB2O60241 1585 aa22.13■■□□□ 1.13
CAPRIN1-207ENST00000529307 SETD1BQ9UPS6 1966 aaKnown RBP22.13■■□□□ 1.13
CAPRIN1-207ENST00000529307 CPSF1Q10570 1443 aaKnown RBP22.12■■□□□ 1.13
CAPRIN1-207ENST00000529307 CCDC136Q96JN2 1154 aa22.12■■□□□ 1.13
CAPRIN1-207ENST00000529307 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
CAPRIN1-207ENST00000529307 PTCH1Q13635 1447 aa22.12■■□□□ 1.13
CAPRIN1-207ENST00000529307 MTHFSP49914 203 aa22.11■■□□□ 1.13
CAPRIN1-207ENST00000529307 ANKLE2Q86XL3 938 aa22.11■■□□□ 1.13
CAPRIN1-207ENST00000529307 CCDC61Q9Y6R9 512 aa22.11■■□□□ 1.13
CAPRIN1-207ENST00000529307 XRN1Q8IZH2 1706 aaKnown RBP22.1■■□□□ 1.13
CAPRIN1-207ENST00000529307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.08■■□□□ 1.13
CAPRIN1-207ENST00000529307 KCNA6P17658 529 aa22.08■■□□□ 1.12
CAPRIN1-207ENST00000529307 SHPRHQ149N8 1683 aa22.07■■□□□ 1.12
CAPRIN1-207ENST00000529307 CDC42BPGQ6DT37 1551 aa22.07■■□□□ 1.12
CAPRIN1-207ENST00000529307 ANKRD26Q9UPS8 1709 aa22.07■■□□□ 1.12
CAPRIN1-207ENST00000529307 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
CAPRIN1-207ENST00000529307 NUTM2FA1L443 756 aa22.06■■□□□ 1.12
CAPRIN1-207ENST00000529307 NOP58Q9Y2X3 529 aaKnown RBP22.06■■□□□ 1.12
CAPRIN1-207ENST00000529307 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
CAPRIN1-207ENST00000529307 CDCA7LQ96GN5 454 aa22.05■■□□□ 1.12
CAPRIN1-207ENST00000529307 KIF20BQ96Q89 1820 aa22.05■■□□□ 1.12
CAPRIN1-207ENST00000529307 EDC4Q6P2E9 1401 aaKnown RBP22.04■■□□□ 1.12
CAPRIN1-207ENST00000529307 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms