RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 WDR43Q15061 677 aaKnown RBP eCLIP23.09■■□□□ 1.29
PCDHA6-202ENST00000527624 ERICH6BQ5W0A0 696 aa23.08■■□□□ 1.29
PCDHA6-202ENST00000527624 PUS7Q96PZ0 661 aaKnown RBP23.08■■□□□ 1.29
PCDHA6-202ENST00000527624 INSRP06213 1382 aa23.07■■□□□ 1.28
PCDHA6-202ENST00000527624 CEBPAP49715 358 aaPredicted RBP23.05■■□□□ 1.28
PCDHA6-202ENST00000527624 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.05■■□□□ 1.28
PCDHA6-202ENST00000527624 TNNT2P45379 298 aaPredicted RBP23.04■■□□□ 1.28
PCDHA6-202ENST00000527624 ANKRD36BQ8N2N9 1353 aa23.04■■□□□ 1.28
PCDHA6-202ENST00000527624 MORC1Q86VD1 984 aa23.04■■□□□ 1.28
PCDHA6-202ENST00000527624 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
PCDHA6-202ENST00000527624 CGNL1Q0VF96 1302 aa23.02■■□□□ 1.28
PCDHA6-202ENST00000527624 WAPLQ7Z5K2 1190 aa23.02■■□□□ 1.28
PCDHA6-202ENST00000527624 SETD1AO15047 1707 aaKnown RBP23■■□□□ 1.27
PCDHA6-202ENST00000527624 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
PCDHA6-202ENST00000527624 METP08581 1390 aa23■■□□□ 1.27
PCDHA6-202ENST00000527624 PLEKHH1Q9ULM0 1364 aa23■■□□□ 1.27
PCDHA6-202ENST00000527624 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
PCDHA6-202ENST00000527624 A0A1W2PP64 1363 aa22.99■■□□□ 1.27
PCDHA6-202ENST00000527624 TMEM2Q9UHN6 1383 aa22.99■■□□□ 1.27
PCDHA6-202ENST00000527624 CDK19Q9BWU1 502 aa22.98■■□□□ 1.27
PCDHA6-202ENST00000527624 ATAD2Q6PL18 1390 aa22.98■■□□□ 1.27
PCDHA6-202ENST00000527624 HDGFP51858 240 aaKnown RBP22.98■■□□□ 1.27
PCDHA6-202ENST00000527624 PDE3BQ13370 1112 aa22.98■■□□□ 1.27
PCDHA6-202ENST00000527624 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
PCDHA6-202ENST00000527624 USP32Q8NFA0 1604 aa22.96■■□□□ 1.27
PCDHA6-202ENST00000527624 UBR1Q8IWV7 1749 aa22.96■■□□□ 1.27
PCDHA6-202ENST00000527624 ABCC11Q96J66 1382 aa22.96■■□□□ 1.27
PCDHA6-202ENST00000527624 DLC1Q96QB1 1528 aa22.96■■□□□ 1.27
PCDHA6-202ENST00000527624 CCDC146Q8IYE0 955 aa22.96■■□□□ 1.27
PCDHA6-202ENST00000527624 PPP4R2Q9NY27 417 aa22.96■■□□□ 1.27
PCDHA6-202ENST00000527624 RNF123Q5XPI4 1314 aa22.94■■□□□ 1.26
PCDHA6-202ENST00000527624 TXNDC2Q86VQ3 553 aa22.94■■□□□ 1.26
PCDHA6-202ENST00000527624 POLR3AO14802 1390 aaPredicted RBP22.92■■□□□ 1.26
PCDHA6-202ENST00000527624 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
PCDHA6-202ENST00000527624 RBM19Q9Y4C8 960 aaKnown RBP22.92■■□□□ 1.26
PCDHA6-202ENST00000527624 NLRP1Q9C000 1473 aa22.91■■□□□ 1.26
PCDHA6-202ENST00000527624 MYT1Q01538 1121 aa22.91■■□□□ 1.26
PCDHA6-202ENST00000527624 CABP1Q9NZU7 370 aa22.91■■□□□ 1.26
PCDHA6-202ENST00000527624 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
PCDHA6-202ENST00000527624 LTKP29376 864 aa22.9■■□□□ 1.26
PCDHA6-202ENST00000527624 NSD2O96028 1365 aa22.9■■□□□ 1.26
PCDHA6-202ENST00000527624 MTHFSP49914 203 aa22.89■■□□□ 1.26
PCDHA6-202ENST00000527624 C3P01024 1663 aa22.89■■□□□ 1.26
PCDHA6-202ENST00000527624 GGNBP2Q9H3C7 697 aa22.89■■□□□ 1.25
PCDHA6-202ENST00000527624 RCAN3Q9UKA8 241 aa22.89■■□□□ 1.25
PCDHA6-202ENST00000527624 FER1L4A9Z1Z3 1794 aa22.87■■□□□ 1.25
PCDHA6-202ENST00000527624 APAF1O14727 1248 aa22.87■■□□□ 1.25
PCDHA6-202ENST00000527624 HDGFL2Q7Z4V5 671 aaPredicted RBP22.87■■□□□ 1.25
PCDHA6-202ENST00000527624 ADAMTS13Q76LX8 1427 aa22.86■■□□□ 1.25
PCDHA6-202ENST00000527624 FYB1O15117 783 aa22.84■■□□□ 1.25
PCDHA6-202ENST00000527624 B4GALNT3Q6L9W6 998 aa22.84■■□□□ 1.25
PCDHA6-202ENST00000527624 PLEKHG1Q9ULL1 1385 aa22.84■■□□□ 1.25
PCDHA6-202ENST00000527624 WASLO00401 505 aaPredicted RBP22.84■■□□□ 1.25
PCDHA6-202ENST00000527624 ZNF521Q96K83 1311 aa22.83■■□□□ 1.25
PCDHA6-202ENST00000527624 TECPR2O15040 1411 aa22.83■■□□□ 1.25
PCDHA6-202ENST00000527624 RRP1P56182 461 aaKnown RBP22.82■■□□□ 1.24
PCDHA6-202ENST00000527624 CFAP53Q96M91 514 aa22.82■■□□□ 1.24
PCDHA6-202ENST00000527624 SLC26A8Q96RN1 970 aa22.82■■□□□ 1.24
PCDHA6-202ENST00000527624 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
PCDHA6-202ENST00000527624 FAM135BQ49AJ0 1406 aa22.82■■□□□ 1.24
PCDHA6-202ENST00000527624 SHPRHQ149N8 1683 aa22.81■■□□□ 1.24
PCDHA6-202ENST00000527624 ROBO2Q9HCK4 1378 aa22.81■■□□□ 1.24
PCDHA6-202ENST00000527624 CPS1P31327 1500 aa22.8■■□□□ 1.24
PCDHA6-202ENST00000527624 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
PCDHA6-202ENST00000527624 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
PCDHA6-202ENST00000527624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.8■■□□□ 1.24
PCDHA6-202ENST00000527624 SIRT1Q96EB6 747 aa22.8■■□□□ 1.24
PCDHA6-202ENST00000527624 NCKAP5LQ9HCH0 1330 aa22.78■■□□□ 1.24
PCDHA6-202ENST00000527624 PPIP5K1Q6PFW1 1433 aa22.77■■□□□ 1.24
PCDHA6-202ENST00000527624 ATP7BP35670 1465 aa22.77■■□□□ 1.24
PCDHA6-202ENST00000527624 DUSP27Q5VZP5 1158 aa22.77■■□□□ 1.24
PCDHA6-202ENST00000527624 NUDT16Q96DE0 195 aaKnown RBP22.77■■□□□ 1.24
PCDHA6-202ENST00000527624 SLIT1O75093 1534 aa22.76■■□□□ 1.23
PCDHA6-202ENST00000527624 ARHGAP23Q9P227 1491 aa22.76■■□□□ 1.23
PCDHA6-202ENST00000527624 THEMISQ8N1K5 641 aaPredicted RBP22.75■■□□□ 1.23
PCDHA6-202ENST00000527624 MED14O60244 1454 aa22.75■■□□□ 1.23
PCDHA6-202ENST00000527624 SPINK5Q9NQ38 1064 aaPredicted RBP22.74■■□□□ 1.23
PCDHA6-202ENST00000527624 SLFN5Q08AF3 891 aa22.73■■□□□ 1.23
PCDHA6-202ENST00000527624 PTPRUQ92729 1446 aa22.73■■□□□ 1.23
PCDHA6-202ENST00000527624 U2AF1L5P0DN76 240 aaPredicted RBP22.73■■□□□ 1.23
PCDHA6-202ENST00000527624 U2AF1Q01081 240 aaKnown RBP eCLIP22.73■■□□□ 1.23
PCDHA6-202ENST00000527624 RUNDC1Q96C34 613 aa22.73■■□□□ 1.23
PCDHA6-202ENST00000527624 RRP7AQ9Y3A4 280 aaKnown RBP22.73■■□□□ 1.23
PCDHA6-202ENST00000527624 NEUROD2Q15784 382 aa22.72■■□□□ 1.23
PCDHA6-202ENST00000527624 DMRT2Q9Y5R5 561 aa22.72■■□□□ 1.23
PCDHA6-202ENST00000527624 CCDC61Q9Y6R9 512 aa22.72■■□□□ 1.23
PCDHA6-202ENST00000527624 PLIN1O60240 522 aa22.72■■□□□ 1.23
PCDHA6-202ENST00000527624 ANKRD26Q9UPS8 1709 aa22.71■■□□□ 1.23
PCDHA6-202ENST00000527624 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
PCDHA6-202ENST00000527624 PRR36Q9H6K5 1346 aa22.71■■□□□ 1.23
PCDHA6-202ENST00000527624 TCP11L2Q8N4U5 519 aa22.7■■□□□ 1.22
PCDHA6-202ENST00000527624 AMOTL2Q9Y2J4 779 aa22.69■■□□□ 1.22
PCDHA6-202ENST00000527624 KIF20BQ96Q89 1820 aa22.69■■□□□ 1.22
PCDHA6-202ENST00000527624 NUTM2FA1L443 756 aa22.69■■□□□ 1.22
PCDHA6-202ENST00000527624 FBLN1P23142 703 aa22.69■■□□□ 1.22
PCDHA6-202ENST00000527624 NGEFQ8N5V2 710 aa22.69■■□□□ 1.22
PCDHA6-202ENST00000527624 EXOC6Q8TAG9 804 aa22.69■■□□□ 1.22
PCDHA6-202ENST00000527624 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
PCDHA6-202ENST00000527624 U2SURPO15042 1029 aaKnown RBP22.68■■□□□ 1.22
PCDHA6-202ENST00000527624 WWC1Q8IX03 1113 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms