RNA–Protein interactions for RNA: ENST00000527011.5

VAV3-210, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene VAV3, Length 4,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-210ENST00000527011 HAP1P54257 671 aaPredicted RBP20.14■□□□□ 0.81
VAV3-210ENST00000527011 RBM42Q9BTD8 480 aaKnown RBP20.14■□□□□ 0.81
VAV3-210ENST00000527011 SUPT6HQ7KZ85 1726 aaKnown RBP20.14■□□□□ 0.81
VAV3-210ENST00000527011 KIF3BO15066 747 aa20.14■□□□□ 0.81
VAV3-210ENST00000527011 RSPH4AQ5TD94 716 aa20.14■□□□□ 0.81
VAV3-210ENST00000527011 WDR63Q8IWG1 891 aa20.13■□□□□ 0.81
VAV3-210ENST00000527011 ATP6V1DQ9Y5K8 247 aa20.13■□□□□ 0.81
VAV3-210ENST00000527011 ROCK1Q13464 1354 aa20.13■□□□□ 0.81
VAV3-210ENST00000527011 NPHP1O15259 732 aa20.13■□□□□ 0.81
VAV3-210ENST00000527011 KANK1Q14678 1352 aa20.13■□□□□ 0.81
VAV3-210ENST00000527011 RLBP1P12271 317 aa20.13■□□□□ 0.81
VAV3-210ENST00000527011 PPP4R3BQ5MIZ7 849 aa20.12■□□□□ 0.81
VAV3-210ENST00000527011 CWC22Q9HCG8 908 aaKnown RBP20.12■□□□□ 0.81
VAV3-210ENST00000527011 CCDC27Q2M243 656 aa20.12■□□□□ 0.81
VAV3-210ENST00000527011 CGNQ9P2M7 1197 aaKnown RBP20.12■□□□□ 0.81
VAV3-210ENST00000527011 ABCC5O15440 1437 aa20.12■□□□□ 0.81
VAV3-210ENST00000527011 DISP3Q9P2K9 1392 aa20.12■□□□□ 0.81
VAV3-210ENST00000527011 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
VAV3-210ENST00000527011 CFAP70Q5T0N1 1121 aa20.12■□□□□ 0.81
VAV3-210ENST00000527011 IGSF3O75054 1194 aa20.11■□□□□ 0.81
VAV3-210ENST00000527011 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
VAV3-210ENST00000527011 HDGFL2Q7Z4V5 671 aaPredicted RBP20.11■□□□□ 0.81
VAV3-210ENST00000527011 PER1O15534 1290 aaPredicted RBP20.11■□□□□ 0.81
VAV3-210ENST00000527011 VPS37CA5D8V6 355 aaPredicted RBP20.1■□□□□ 0.81
VAV3-210ENST00000527011 FIBPO43427 364 aa20.1■□□□□ 0.81
VAV3-210ENST00000527011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.1■□□□□ 0.81
VAV3-210ENST00000527011 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
VAV3-210ENST00000527011 BBXQ8WY36 941 aaPredicted RBP20.1■□□□□ 0.81
VAV3-210ENST00000527011 SSH1Q8WYL5 1049 aa20.1■□□□□ 0.81
VAV3-210ENST00000527011 GCC1Q96CN9 775 aa20.1■□□□□ 0.81
VAV3-210ENST00000527011 GOLGA6L19H0YKK7 550 aa20.1■□□□□ 0.81
VAV3-210ENST00000527011 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
VAV3-210ENST00000527011 ZNF830Q96NB3 372 aaPredicted RBP20.09■□□□□ 0.81
VAV3-210ENST00000527011 PRIM1P49642 420 aaKnown RBP20.09■□□□□ 0.81
VAV3-210ENST00000527011 GAS2L3Q86XJ1 694 aa20.09■□□□□ 0.81
VAV3-210ENST00000527011 GGNBP2Q9H3C7 697 aa20.09■□□□□ 0.81
VAV3-210ENST00000527011 GGT6Q6P531 493 aa20.08■□□□□ 0.81
VAV3-210ENST00000527011 ZKSCAN5Q9Y2L8 839 aa20.08■□□□□ 0.81
VAV3-210ENST00000527011 FSD2A1L4K1 749 aa20.08■□□□□ 0.81
VAV3-210ENST00000527011 USP25Q9UHP3 1055 aa20.08■□□□□ 0.81
VAV3-210ENST00000527011 CDK13Q14004 1512 aaKnown RBP20.08■□□□□ 0.8
VAV3-210ENST00000527011 BECN2A8MW95 431 aa20.07■□□□□ 0.8
VAV3-210ENST00000527011 HTATSF1O43719 755 aaKnown RBP20.07■□□□□ 0.8
VAV3-210ENST00000527011 API5Q9BZZ5 524 aaKnown RBP20.07■□□□□ 0.8
VAV3-210ENST00000527011 CCDC66A2RUB6 948 aa20.07■□□□□ 0.8
VAV3-210ENST00000527011 TRIM27P14373 513 aa20.07■□□□□ 0.8
VAV3-210ENST00000527011 FAM177BA6PVY3 158 aa20.06■□□□□ 0.8
VAV3-210ENST00000527011 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
VAV3-210ENST00000527011 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
VAV3-210ENST00000527011 RAB3GAP1Q15042 981 aa20.06■□□□□ 0.8
VAV3-210ENST00000527011 TPD52L1Q16890 204 aaPredicted RBP20.06■□□□□ 0.8
VAV3-210ENST00000527011 TERF2IPQ9NYB0 399 aa20.06■□□□□ 0.8
VAV3-210ENST00000527011 CARMIL2Q6F5E8 1435 aa20.06■□□□□ 0.8
VAV3-210ENST00000527011 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 GDPD2Q9HCC8 539 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 SMC3Q9UQE7 1217 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 ERICH4A6NGS2 130 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 TRIM5Q9C035 493 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 HMOX1P09601 288 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 TBC1D9Q6ZT07 1266 aa20.05■□□□□ 0.8
VAV3-210ENST00000527011 PRG4Q92954 1404 aaPredicted RBP20.05■□□□□ 0.8
VAV3-210ENST00000527011 MCM5P33992 734 aa20.03■□□□□ 0.8
VAV3-210ENST00000527011 EFCAB2Q5VUJ9 269 aa20.03■□□□□ 0.8
VAV3-210ENST00000527011 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
VAV3-210ENST00000527011 SPATA31E1Q6ZUB1 1445 aa20.03■□□□□ 0.8
VAV3-210ENST00000527011 ANTXR1Q9H6X2 564 aa20.03■□□□□ 0.8
VAV3-210ENST00000527011 SMC5Q8IY18 1101 aa20.02■□□□□ 0.8
VAV3-210ENST00000527011 DMRT2Q9Y5R5 561 aa20.02■□□□□ 0.79
VAV3-210ENST00000527011 CCAR2Q8N163 923 aaKnown RBP20.01■□□□□ 0.79
VAV3-210ENST00000527011 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
VAV3-210ENST00000527011 BICD2Q8TD16 824 aa20.01■□□□□ 0.79
VAV3-210ENST00000527011 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
VAV3-210ENST00000527011 TMEM132EQ6IEE7 984 aa20.01■□□□□ 0.79
VAV3-210ENST00000527011 CCDC112Q8NEF3 446 aa20.01■□□□□ 0.79
VAV3-210ENST00000527011 EPRSP07814 1512 aaKnown RBP20.01■□□□□ 0.79
VAV3-210ENST00000527011 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
VAV3-210ENST00000527011 BIVM-ERCC5R4GMW8 1640 aa20■□□□□ 0.79
VAV3-210ENST00000527011 ERBB4Q15303 1308 aa20■□□□□ 0.79
VAV3-210ENST00000527011 GNL2Q13823 731 aaKnown RBP20■□□□□ 0.79
VAV3-210ENST00000527011 SMAP1Q8IYB5 467 aaPredicted RBP20■□□□□ 0.79
VAV3-210ENST00000527011 TRERF1Q96PN7 1200 aa20■□□□□ 0.79
VAV3-210ENST00000527011 RBSNQ9H1K0 784 aa20■□□□□ 0.79
VAV3-210ENST00000527011 SNX21Q969T3 373 aa19.99■□□□□ 0.79
VAV3-210ENST00000527011 CCDC94Q9BW85 323 aaPredicted RBP19.99■□□□□ 0.79
VAV3-210ENST00000527011 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
VAV3-210ENST00000527011 C9orf84Q5VXU9 1444 aa19.99■□□□□ 0.79
VAV3-210ENST00000527011 PDE4CQ08493 712 aa19.99■□□□□ 0.79
VAV3-210ENST00000527011 TTC12Q9H892 705 aaPredicted RBP19.99■□□□□ 0.79
VAV3-210ENST00000527011 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
VAV3-210ENST00000527011 BMP2KLQ5H9B9 411 aa19.99■□□□□ 0.79
VAV3-210ENST00000527011 HOMER1Q86YM7 354 aa19.99■□□□□ 0.79
VAV3-210ENST00000527011 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.98■□□□□ 0.79
VAV3-210ENST00000527011 NOL7Q9UMY1 257 aaKnown RBP19.98■□□□□ 0.79
VAV3-210ENST00000527011 TPM3P06753 285 aa19.98■□□□□ 0.79
VAV3-210ENST00000527011 TSC1Q92574 1164 aa19.98■□□□□ 0.79
VAV3-210ENST00000527011 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
VAV3-210ENST00000527011 ERC2O15083 957 aa19.97■□□□□ 0.79
VAV3-210ENST00000527011 LRSAM1Q6UWE0 723 aa19.97■□□□□ 0.79
VAV3-210ENST00000527011 UPF3BQ9BZI7 483 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms