RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
PVT1-213ENST00000522414 CERKQ8TCT0 537 aa12.79□□□□□ -0.36
PVT1-213ENST00000522414 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
PVT1-213ENST00000522414 GGT6Q6P531 493 aa12.78□□□□□ -0.36
PVT1-213ENST00000522414 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
PVT1-213ENST00000522414 SETD1BQ9UPS6 1966 aaKnown RBP12.78□□□□□ -0.36
PVT1-213ENST00000522414 MROH2AA6NES4 1674 aa12.77□□□□□ -0.36
PVT1-213ENST00000522414 BHMG1C9JSJ3 638 aaPredicted RBP12.77□□□□□ -0.37
PVT1-213ENST00000522414 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
PVT1-213ENST00000522414 ATP7AQ04656 1500 aa12.77□□□□□ -0.37
PVT1-213ENST00000522414 C3P01024 1663 aa12.77□□□□□ -0.37
PVT1-213ENST00000522414 FOSBP53539 338 aa12.76□□□□□ -0.37
PVT1-213ENST00000522414 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
PVT1-213ENST00000522414 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
PVT1-213ENST00000522414 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
PVT1-213ENST00000522414 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
PVT1-213ENST00000522414 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
PVT1-213ENST00000522414 THSD4Q6ZMP0 1018 aa12.74□□□□□ -0.37
PVT1-213ENST00000522414 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
PVT1-213ENST00000522414 ADGBQ8N7X0 1667 aa12.73□□□□□ -0.37
PVT1-213ENST00000522414 CNTLNQ9NXG0 1405 aa12.73□□□□□ -0.37
PVT1-213ENST00000522414 PPP1R15BQ5SWA1 713 aa12.73□□□□□ -0.37
PVT1-213ENST00000522414 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
PVT1-213ENST00000522414 A2MP01023 1474 aa12.72□□□□□ -0.37
PVT1-213ENST00000522414 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.37
PVT1-213ENST00000522414 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.37
PVT1-213ENST00000522414 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
PVT1-213ENST00000522414 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.37
PVT1-213ENST00000522414 STRCQ7RTU9 1775 aa12.71□□□□□ -0.38
PVT1-213ENST00000522414 NCOA2Q15596 1464 aa12.71□□□□□ -0.38
PVT1-213ENST00000522414 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
PVT1-213ENST00000522414 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
PVT1-213ENST00000522414 FAM135AQ9P2D6 1515 aa12.7□□□□□ -0.38
PVT1-213ENST00000522414 NPATQ14207 1427 aa12.7□□□□□ -0.38
PVT1-213ENST00000522414 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
PVT1-213ENST00000522414 KIF3BO15066 747 aa12.69□□□□□ -0.38
PVT1-213ENST00000522414 PTPREP23469 700 aa12.69□□□□□ -0.38
PVT1-213ENST00000522414 FBXO31Q5XUX0 539 aaPredicted RBP12.68□□□□□ -0.38
PVT1-213ENST00000522414 DHX29Q7Z478 1369 aaKnown RBP12.68□□□□□ -0.38
PVT1-213ENST00000522414 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
PVT1-213ENST00000522414 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
PVT1-213ENST00000522414 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
PVT1-213ENST00000522414 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
PVT1-213ENST00000522414 ADAM33Q9BZ11 813 aa12.67□□□□□ -0.38
PVT1-213ENST00000522414 CAMSAP2Q08AD1 1489 aa12.66□□□□□ -0.38
PVT1-213ENST00000522414 TSPY4P0CV99 314 aa12.66□□□□□ -0.38
PVT1-213ENST00000522414 TSPY10P0CW01 314 aa12.66□□□□□ -0.38
PVT1-213ENST00000522414 WNT2BQ93097 391 aa12.66□□□□□ -0.38
PVT1-213ENST00000522414 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
PVT1-213ENST00000522414 A0A0G2JS52 829 aa12.65□□□□□ -0.38
PVT1-213ENST00000522414 CLTCQ00610 1675 aaKnown RBP12.64□□□□□ -0.39
PVT1-213ENST00000522414 PTPRTO14522 1441 aa12.64□□□□□ -0.39
PVT1-213ENST00000522414 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
PVT1-213ENST00000522414 EVI5O60447 810 aa12.64□□□□□ -0.39
PVT1-213ENST00000522414 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
PVT1-213ENST00000522414 WASHC2CQ9Y4E1 1318 aa12.63□□□□□ -0.39
PVT1-213ENST00000522414 RGS20O76081 388 aa12.63□□□□□ -0.39
PVT1-213ENST00000522414 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
PVT1-213ENST00000522414 MYO3AQ8NEV4 1616 aa12.62□□□□□ -0.39
PVT1-213ENST00000522414 GOLGA8CPA6NN73 597 aa12.62□□□□□ -0.39
PVT1-213ENST00000522414 ZDHHC16Q969W1 377 aa12.62□□□□□ -0.39
PVT1-213ENST00000522414 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
PVT1-213ENST00000522414 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
PVT1-213ENST00000522414 MIA2Q96PC5 1412 aa12.61□□□□□ -0.39
PVT1-213ENST00000522414 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
PVT1-213ENST00000522414 EIF2AK4Q9P2K8 1649 aaKnown RBP12.59□□□□□ -0.39
PVT1-213ENST00000522414 PDE4AP27815 886 aa12.59□□□□□ -0.39
PVT1-213ENST00000522414 PLA2R1Q13018 1463 aa12.59□□□□□ -0.39
PVT1-213ENST00000522414 KDM5DQ9BY66 1539 aa12.58□□□□□ -0.4
PVT1-213ENST00000522414 MYOM3Q5VTT5 1437 aa12.58□□□□□ -0.4
PVT1-213ENST00000522414 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
PVT1-213ENST00000522414 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
PVT1-213ENST00000522414 LTBP4Q8N2S1 1624 aa12.57□□□□□ -0.4
PVT1-213ENST00000522414 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
PVT1-213ENST00000522414 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
PVT1-213ENST00000522414 MROH1Q8NDA8 1641 aa12.56□□□□□ -0.4
PVT1-213ENST00000522414 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
PVT1-213ENST00000522414 SHANK2Q9UPX8 1470 aa12.56□□□□□ -0.4
PVT1-213ENST00000522414 CROCC2H7BZ55 1655 aa12.56□□□□□ -0.4
PVT1-213ENST00000522414 TNRQ92752 1358 aa12.56□□□□□ -0.4
PVT1-213ENST00000522414 PZPP20742 1482 aa12.55□□□□□ -0.4
PVT1-213ENST00000522414 PROX2Q3B8N5 592 aa12.55□□□□□ -0.4
PVT1-213ENST00000522414 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
PVT1-213ENST00000522414 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
PVT1-213ENST00000522414 RRP7BPQ9NSQ0 103 aa12.55□□□□□ -0.4
PVT1-213ENST00000522414 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
PVT1-213ENST00000522414 THEMISQ8N1K5 641 aaPredicted RBP12.54□□□□□ -0.4
PVT1-213ENST00000522414 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
PVT1-213ENST00000522414 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
PVT1-213ENST00000522414 GTPBP6O43824 516 aaPredicted RBP12.53□□□□□ -0.4
PVT1-213ENST00000522414 COL9A1P20849 921 aa12.53□□□□□ -0.4
PVT1-213ENST00000522414 ANKLE2Q86XL3 938 aa12.53□□□□□ -0.4
PVT1-213ENST00000522414 PCDHGA10Q9Y5H3 936 aa12.53□□□□□ -0.4
PVT1-213ENST00000522414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.53□□□□□ -0.4
PVT1-213ENST00000522414 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
PVT1-213ENST00000522414 DNMT1P26358 1616 aaKnown RBP12.52□□□□□ -0.4
PVT1-213ENST00000522414 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.41
PVT1-213ENST00000522414 CHIC2Q9UKJ5 165 aa12.52□□□□□ -0.41
PVT1-213ENST00000522414 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
PVT1-213ENST00000522414 ABCC3O15438 1527 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms