RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
MRPS28-207ENST00000521434 ATRNO75882 1429 aa13.73□□□□□ -0.21
MRPS28-207ENST00000521434 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
MRPS28-207ENST00000521434 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
MRPS28-207ENST00000521434 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
MRPS28-207ENST00000521434 CCDC125Q86Z20 511 aa13.72□□□□□ -0.21
MRPS28-207ENST00000521434 COL22A1Q8NFW1 1626 aaPredicted RBP13.72□□□□□ -0.21
MRPS28-207ENST00000521434 NUP155O75694 1391 aa13.71□□□□□ -0.21
MRPS28-207ENST00000521434 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
MRPS28-207ENST00000521434 MARF1Q9Y4F3 1742 aaKnown RBP13.71□□□□□ -0.21
MRPS28-207ENST00000521434 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
MRPS28-207ENST00000521434 NEXMIFQ5QGS0 1516 aa13.69□□□□□ -0.22
MRPS28-207ENST00000521434 ORAI2Q96SN7 254 aa13.68□□□□□ -0.22
MRPS28-207ENST00000521434 KIF1BO60333 1816 aa13.68□□□□□ -0.22
MRPS28-207ENST00000521434 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
MRPS28-207ENST00000521434 MYOM2P54296 1465 aa13.67□□□□□ -0.22
MRPS28-207ENST00000521434 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
MRPS28-207ENST00000521434 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
MRPS28-207ENST00000521434 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
MRPS28-207ENST00000521434 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
MRPS28-207ENST00000521434 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
MRPS28-207ENST00000521434 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
MRPS28-207ENST00000521434 BLMP54132 1417 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-207ENST00000521434 PRAG1Q86YV5 1406 aa13.63□□□□□ -0.23
MRPS28-207ENST00000521434 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
MRPS28-207ENST00000521434 PXDNQ92626 1479 aa13.61□□□□□ -0.23
MRPS28-207ENST00000521434 HFM1A2PYH4 1435 aa13.61□□□□□ -0.23
MRPS28-207ENST00000521434 LRP5O75197 1615 aa13.61□□□□□ -0.23
MRPS28-207ENST00000521434 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
MRPS28-207ENST00000521434 GLI3P10071 1580 aa13.6□□□□□ -0.23
MRPS28-207ENST00000521434 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
MRPS28-207ENST00000521434 CDC42BPGQ6DT37 1551 aa13.6□□□□□ -0.23
MRPS28-207ENST00000521434 FOXO3O43524 673 aa13.58□□□□□ -0.24
MRPS28-207ENST00000521434 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
MRPS28-207ENST00000521434 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
MRPS28-207ENST00000521434 ITGAEP38570 1179 aa13.57□□□□□ -0.24
MRPS28-207ENST00000521434 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
MRPS28-207ENST00000521434 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
MRPS28-207ENST00000521434 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
MRPS28-207ENST00000521434 SLIT2O94813 1529 aa13.57□□□□□ -0.24
MRPS28-207ENST00000521434 PPLO60437 1756 aa13.57□□□□□ -0.24
MRPS28-207ENST00000521434 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
MRPS28-207ENST00000521434 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
MRPS28-207ENST00000521434 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
MRPS28-207ENST00000521434 ZBTB22O15209 634 aa13.54□□□□□ -0.24
MRPS28-207ENST00000521434 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
MRPS28-207ENST00000521434 NAIPQ13075 1403 aa13.53□□□□□ -0.24
MRPS28-207ENST00000521434 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
MRPS28-207ENST00000521434 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
MRPS28-207ENST00000521434 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
MRPS28-207ENST00000521434 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
MRPS28-207ENST00000521434 PLCH1Q4KWH8 1693 aa13.51□□□□□ -0.25
MRPS28-207ENST00000521434 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
MRPS28-207ENST00000521434 CCDC144AA2RUR9 1427 aa13.5□□□□□ -0.25
MRPS28-207ENST00000521434 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
MRPS28-207ENST00000521434 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
MRPS28-207ENST00000521434 VPS72Q15906 364 aa13.5□□□□□ -0.25
MRPS28-207ENST00000521434 KRT27Q7Z3Y8 459 aa13.49□□□□□ -0.25
MRPS28-207ENST00000521434 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
MRPS28-207ENST00000521434 TECPR2O15040 1411 aa13.48□□□□□ -0.25
MRPS28-207ENST00000521434 KNDC1Q76NI1 1749 aa13.48□□□□□ -0.25
MRPS28-207ENST00000521434 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
MRPS28-207ENST00000521434 HRCP23327 699 aa13.48□□□□□ -0.25
MRPS28-207ENST00000521434 BAG6P46379 1132 aa13.48□□□□□ -0.25
MRPS28-207ENST00000521434 WAPLQ7Z5K2 1190 aa13.48□□□□□ -0.25
MRPS28-207ENST00000521434 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
MRPS28-207ENST00000521434 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-207ENST00000521434 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
MRPS28-207ENST00000521434 CCDC9Q9Y3X0 531 aaKnown RBP13.47□□□□□ -0.25
MRPS28-207ENST00000521434 STK26Q9P289 416 aa13.46□□□□□ -0.25
MRPS28-207ENST00000521434 IFT172Q9UG01 1749 aa13.46□□□□□ -0.25
MRPS28-207ENST00000521434 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.26
MRPS28-207ENST00000521434 RGPD1P0DJD0 1748 aa13.45□□□□□ -0.26
MRPS28-207ENST00000521434 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
MRPS28-207ENST00000521434 CABLES1Q8TDN4 633 aa13.44□□□□□ -0.26
MRPS28-207ENST00000521434 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
MRPS28-207ENST00000521434 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
MRPS28-207ENST00000521434 ADGRF5Q8IZF2 1346 aa13.43□□□□□ -0.26
MRPS28-207ENST00000521434 A0A0G2JS52 829 aa13.43□□□□□ -0.26
MRPS28-207ENST00000521434 MYT1Q01538 1121 aa13.43□□□□□ -0.26
MRPS28-207ENST00000521434 PSME1Q06323 249 aa13.43□□□□□ -0.26
MRPS28-207ENST00000521434 NRAPQ86VF7 1730 aa13.43□□□□□ -0.26
MRPS28-207ENST00000521434 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
MRPS28-207ENST00000521434 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
MRPS28-207ENST00000521434 SBNO1A3KN83 1393 aa13.42□□□□□ -0.26
MRPS28-207ENST00000521434 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
MRPS28-207ENST00000521434 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
MRPS28-207ENST00000521434 TNS1Q9HBL0 1735 aaKnown RBP13.4□□□□□ -0.26
MRPS28-207ENST00000521434 FAM83GA6ND36 823 aa13.4□□□□□ -0.26
MRPS28-207ENST00000521434 EN1Q05925 392 aaPredicted RBP13.4□□□□□ -0.26
MRPS28-207ENST00000521434 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
MRPS28-207ENST00000521434 TMEM132EQ6IEE7 984 aa13.4□□□□□ -0.26
MRPS28-207ENST00000521434 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
MRPS28-207ENST00000521434 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
MRPS28-207ENST00000521434 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
MRPS28-207ENST00000521434 YTHDC2Q9H6S0 1430 aaKnown RBP13.39□□□□□ -0.27
MRPS28-207ENST00000521434 R3HDM1Q15032 1099 aaKnown RBP13.39□□□□□ -0.27
MRPS28-207ENST00000521434 COL14A1Q05707 1796 aaKnown RBP13.38□□□□□ -0.27
MRPS28-207ENST00000521434 RGL3Q3MIN7 710 aa13.38□□□□□ -0.27
MRPS28-207ENST00000521434 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms