RNA–Protein interactions for RNA: ENST00000519533.1

CHRAC1-203, Transcript of chromatin accessibility complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CHRAC1, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-203ENST00000519533 SLC26A8Q96RN1 970 aa29.19■■■□□ 2.26
CHRAC1-203ENST00000519533 KNSTRNQ9Y448 316 aa29.18■■■□□ 2.26
CHRAC1-203ENST00000519533 ATAD2Q6PL18 1390 aa29.17■■■□□ 2.26
CHRAC1-203ENST00000519533 NINLQ9Y2I6 1382 aa29.17■■■□□ 2.26
CHRAC1-203ENST00000519533 SRPK2P78362 688 aaKnown RBP29.15■■■□□ 2.26
CHRAC1-203ENST00000519533 PIK3R4Q99570 1358 aa29.15■■■□□ 2.26
CHRAC1-203ENST00000519533 WAPLQ7Z5K2 1190 aa29.15■■■□□ 2.26
CHRAC1-203ENST00000519533 PLEKHH1Q9ULM0 1364 aa29.14■■■□□ 2.25
CHRAC1-203ENST00000519533 CENPBP07199 599 aaPredicted RBP29.13■■■□□ 2.25
CHRAC1-203ENST00000519533 TMC1Q8TDI8 760 aa29.13■■■□□ 2.25
CHRAC1-203ENST00000519533 CNGB1Q14028 1251 aaPredicted RBP29.12■■■□□ 2.25
CHRAC1-203ENST00000519533 CABP2Q9NPB3 220 aa29.12■■■□□ 2.25
CHRAC1-203ENST00000519533 PARD3Q8TEW0 1356 aa29.11■■■□□ 2.25
CHRAC1-203ENST00000519533 PTCH1Q13635 1447 aa29.1■■■□□ 2.25
CHRAC1-203ENST00000519533 PTPRUQ92729 1446 aa29.1■■■□□ 2.25
CHRAC1-203ENST00000519533 XRN1Q8IZH2 1706 aaKnown RBP29.1■■■□□ 2.25
CHRAC1-203ENST00000519533 NPC1L1Q9UHC9 1359 aa29.09■■■□□ 2.25
CHRAC1-203ENST00000519533 MYBBP1AQ9BQG0 1328 aaKnown RBP29.09■■■□□ 2.25
CHRAC1-203ENST00000519533 ROBO2Q9HCK4 1378 aa29.09■■■□□ 2.25
CHRAC1-203ENST00000519533 CDK19Q9BWU1 502 aa29.09■■■□□ 2.25
CHRAC1-203ENST00000519533 AMOTL2Q9Y2J4 779 aa29.09■■■□□ 2.25
CHRAC1-203ENST00000519533 MRS2Q9HD23 443 aa29.08■■■□□ 2.25
CHRAC1-203ENST00000519533 ADGRB2O60241 1585 aa29.07■■■□□ 2.24
CHRAC1-203ENST00000519533 SLC12A5Q9H2X9 1139 aa29.06■■■□□ 2.24
CHRAC1-203ENST00000519533 NPHP4O75161 1426 aaPredicted RBP29.06■■■□□ 2.24
CHRAC1-203ENST00000519533 CC2D1BQ5T0F9 858 aaKnown RBP29.05■■■□□ 2.24
CHRAC1-203ENST00000519533 ANKRD36BQ8N2N9 1353 aa29.05■■■□□ 2.24
CHRAC1-203ENST00000519533 CHD2O14647 1828 aaKnown RBP29.05■■■□□ 2.24
CHRAC1-203ENST00000519533 USP32Q8NFA0 1604 aa29.04■■■□□ 2.24
CHRAC1-203ENST00000519533 WASLO00401 505 aaPredicted RBP29.03■■■□□ 2.24
CHRAC1-203ENST00000519533 AMER1Q5JTC6 1135 aaPredicted RBP29.03■■■□□ 2.24
CHRAC1-203ENST00000519533 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.01■■■□□ 2.24
CHRAC1-203ENST00000519533 BRD4O60885 1362 aaPredicted RBP29.01■■■□□ 2.23
CHRAC1-203ENST00000519533 KDM4FA0A1W2PPD8 638 aa29■■■□□ 2.23
CHRAC1-203ENST00000519533 NSD3Q9BZ95 1437 aa29■■■□□ 2.23
CHRAC1-203ENST00000519533 CARD14Q9BXL6 1004 aa28.99■■■□□ 2.23
CHRAC1-203ENST00000519533 TERF2IPQ9NYB0 399 aa28.99■■■□□ 2.23
CHRAC1-203ENST00000519533 NLRP13Q86W25 1043 aa28.99■■■□□ 2.23
CHRAC1-203ENST00000519533 CCDC184Q52MB2 194 aa28.97■■■□□ 2.23
CHRAC1-203ENST00000519533 ATP7BP35670 1465 aa28.94■■■□□ 2.22
CHRAC1-203ENST00000519533 HDGFL2Q7Z4V5 671 aaPredicted RBP28.94■■■□□ 2.22
CHRAC1-203ENST00000519533 CGNL1Q0VF96 1302 aa28.94■■■□□ 2.22
CHRAC1-203ENST00000519533 NCKAP5LQ9HCH0 1330 aa28.93■■■□□ 2.22
CHRAC1-203ENST00000519533 A0A1W2PP64 1363 aa28.93■■■□□ 2.22
CHRAC1-203ENST00000519533 KCNA6P17658 529 aa28.93■■■□□ 2.22
CHRAC1-203ENST00000519533 NSD2O96028 1365 aa28.91■■■□□ 2.22
CHRAC1-203ENST00000519533 CABP1Q9NZU7 370 aa28.89■■■□□ 2.22
CHRAC1-203ENST00000519533 CD163L1Q9NR16 1453 aa28.89■■■□□ 2.22
CHRAC1-203ENST00000519533 PPIP5K1Q6PFW1 1433 aa28.89■■■□□ 2.22
CHRAC1-203ENST00000519533 NUDT16Q96DE0 195 aaKnown RBP28.89■■■□□ 2.21
CHRAC1-203ENST00000519533 CCDC61Q9Y6R9 512 aa28.89■■■□□ 2.21
CHRAC1-203ENST00000519533 FAM9BQ8IZU0 186 aa28.88■■■□□ 2.21
CHRAC1-203ENST00000519533 ITSN1Q15811 1721 aa28.87■■■□□ 2.21
CHRAC1-203ENST00000519533 NWD1Q149M9 1564 aa28.87■■■□□ 2.21
CHRAC1-203ENST00000519533 TOPAZ1Q8N9V7 1692 aa28.86■■■□□ 2.21
CHRAC1-203ENST00000519533 CDC42BPGQ6DT37 1551 aa28.85■■■□□ 2.21
CHRAC1-203ENST00000519533 ANKRD26Q9UPS8 1709 aa28.83■■■□□ 2.21
CHRAC1-203ENST00000519533 PPP2R1AP30153 589 aa28.83■■■□□ 2.21
CHRAC1-203ENST00000519533 LMTK3Q96Q04 1460 aa28.83■■■□□ 2.21
CHRAC1-203ENST00000519533 KIF20BQ96Q89 1820 aa28.83■■■□□ 2.21
CHRAC1-203ENST00000519533 AKAP12Q02952 1782 aa28.83■■■□□ 2.21
CHRAC1-203ENST00000519533 MORC1Q86VD1 984 aa28.81■■■□□ 2.2
CHRAC1-203ENST00000519533 MON2Q7Z3U7 1717 aa28.81■■■□□ 2.2
CHRAC1-203ENST00000519533 PNISRQ8TF01 805 aaKnown RBP28.8■■■□□ 2.2
CHRAC1-203ENST00000519533 CPSF1Q10570 1443 aaKnown RBP28.8■■■□□ 2.2
CHRAC1-203ENST00000519533 NALCNQ8IZF0 1738 aa28.8■■■□□ 2.2
CHRAC1-203ENST00000519533 PRR36Q9H6K5 1346 aa28.79■■■□□ 2.2
CHRAC1-203ENST00000519533 FMN2Q9NZ56 1722 aa28.79■■■□□ 2.2
CHRAC1-203ENST00000519533 NKTRP30414 1462 aaKnown RBP28.77■■■□□ 2.2
CHRAC1-203ENST00000519533 HSPA2P54652 639 aa28.77■■■□□ 2.2
CHRAC1-203ENST00000519533 ZNF692Q9BU19 519 aaPredicted RBP28.77■■■□□ 2.2
CHRAC1-203ENST00000519533 EDC4Q6P2E9 1401 aaKnown RBP28.77■■■□□ 2.2
CHRAC1-203ENST00000519533 ANKARQ7Z5J8 1434 aa28.77■■■□□ 2.2
CHRAC1-203ENST00000519533 HNRNPUQ00839 825 aaKnown RBP eCLIP28.77■■■□□ 2.2
CHRAC1-203ENST00000519533 ADGRL3Q9HAR2 1447 aa28.74■■■□□ 2.19
CHRAC1-203ENST00000519533 RGPD8O14715 1765 aaPredicted RBP28.74■■■□□ 2.19
CHRAC1-203ENST00000519533 PLEKHG3A1L390 1219 aa28.73■■■□□ 2.19
CHRAC1-203ENST00000519533 STRCQ7RTU9 1775 aa28.71■■■□□ 2.19
CHRAC1-203ENST00000519533 NUTM2FA1L443 756 aa28.7■■■□□ 2.18
CHRAC1-203ENST00000519533 FYB1O15117 783 aa28.7■■■□□ 2.18
CHRAC1-203ENST00000519533 INSRP06213 1382 aa28.68■■■□□ 2.18
CHRAC1-203ENST00000519533 C14orf37Q86TY3 774 aa28.67■■■□□ 2.18
CHRAC1-203ENST00000519533 PROSER2Q86WR7 435 aaPredicted RBP28.67■■■□□ 2.18
CHRAC1-203ENST00000519533 GGNBP2Q9H3C7 697 aa28.67■■■□□ 2.18
CHRAC1-203ENST00000519533 ACEP12821 1306 aa28.66■■■□□ 2.18
CHRAC1-203ENST00000519533 NRKQ7Z2Y5 1582 aa28.66■■■□□ 2.18
CHRAC1-203ENST00000519533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.65■■■□□ 2.18
CHRAC1-203ENST00000519533 POLR3AO14802 1390 aaPredicted RBP28.64■■■□□ 2.18
CHRAC1-203ENST00000519533 TNNT2P45379 298 aaPredicted RBP28.64■■■□□ 2.17
CHRAC1-203ENST00000519533 WDR43Q15061 677 aaKnown RBP eCLIP28.64■■■□□ 2.17
CHRAC1-203ENST00000519533 USP6P35125 1406 aa28.63■■■□□ 2.17
CHRAC1-203ENST00000519533 STRCP1A6NGW2 1772 aa28.62■■■□□ 2.17
CHRAC1-203ENST00000519533 NCOA3Q9Y6Q9 1424 aa28.61■■■□□ 2.17
CHRAC1-203ENST00000519533 ZBED9Q6R2W3 1325 aa28.61■■■□□ 2.17
CHRAC1-203ENST00000519533 CFAP53Q96M91 514 aa28.61■■■□□ 2.17
CHRAC1-203ENST00000519533 NGDNQ8NEJ9 315 aaKnown RBP28.6■■■□□ 2.17
CHRAC1-203ENST00000519533 RBM33Q96EV2 1170 aaKnown RBP28.59■■■□□ 2.17
CHRAC1-203ENST00000519533 PMFBP1Q8TBY8 1022 aa28.58■■■□□ 2.16
CHRAC1-203ENST00000519533 SCAF1Q9H7N4 1312 aaKnown RBP28.57■■■□□ 2.16
CHRAC1-203ENST00000519533 TTC21BQ7Z4L5 1316 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms