RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
SH2D4A-204ENST00000519207 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
SH2D4A-204ENST00000519207 KDM5AP29375 1690 aaKnown RBP13.3□□□□□ -0.28
SH2D4A-204ENST00000519207 MYOM1P52179 1685 aa13.3□□□□□ -0.28
SH2D4A-204ENST00000519207 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
SH2D4A-204ENST00000519207 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
SH2D4A-204ENST00000519207 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
SH2D4A-204ENST00000519207 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.28
SH2D4A-204ENST00000519207 UGGT1Q9NYU2 1555 aa13.27□□□□□ -0.29
SH2D4A-204ENST00000519207 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
SH2D4A-204ENST00000519207 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
SH2D4A-204ENST00000519207 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
SH2D4A-204ENST00000519207 ADGRB3O60242 1522 aa13.26□□□□□ -0.29
SH2D4A-204ENST00000519207 CDCA7LQ96GN5 454 aa13.26□□□□□ -0.29
SH2D4A-204ENST00000519207 ADAMTS8Q9UP79 889 aa13.26□□□□□ -0.29
SH2D4A-204ENST00000519207 ADGRF5Q8IZF2 1346 aa13.26□□□□□ -0.29
SH2D4A-204ENST00000519207 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
SH2D4A-204ENST00000519207 SETBP1Q9Y6X0 1596 aa13.25□□□□□ -0.29
SH2D4A-204ENST00000519207 ABCC3O15438 1527 aa13.25□□□□□ -0.29
SH2D4A-204ENST00000519207 ERVK-7P63135 1459 aa13.25□□□□□ -0.29
SH2D4A-204ENST00000519207 NLRP1Q9C000 1473 aa13.25□□□□□ -0.29
SH2D4A-204ENST00000519207 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
SH2D4A-204ENST00000519207 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
SH2D4A-204ENST00000519207 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
SH2D4A-204ENST00000519207 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
SH2D4A-204ENST00000519207 RSPH6AQ9H0K4 717 aa13.22□□□□□ -0.29
SH2D4A-204ENST00000519207 SPATA31D1Q6ZQQ2 1576 aa13.22□□□□□ -0.29
SH2D4A-204ENST00000519207 PPLO60437 1756 aa13.22□□□□□ -0.29
SH2D4A-204ENST00000519207 PKNOX2Q96KN3 472 aa13.21□□□□□ -0.29
SH2D4A-204ENST00000519207 RPGRIP1LQ68CZ1 1315 aa13.21□□□□□ -0.29
SH2D4A-204ENST00000519207 ZNF521Q96K83 1311 aa13.21□□□□□ -0.29
SH2D4A-204ENST00000519207 NEFMP07197 916 aa13.21□□□□□ -0.29
SH2D4A-204ENST00000519207 NOS1P29475 1434 aa13.2□□□□□ -0.3
SH2D4A-204ENST00000519207 ZC3H13Q5T200 1668 aaKnown RBP13.2□□□□□ -0.3
SH2D4A-204ENST00000519207 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
SH2D4A-204ENST00000519207 NPHP4O75161 1426 aaPredicted RBP13.2□□□□□ -0.3
SH2D4A-204ENST00000519207 MED14O60244 1454 aa13.2□□□□□ -0.3
SH2D4A-204ENST00000519207 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
SH2D4A-204ENST00000519207 PLEKHH1Q9ULM0 1364 aa13.19□□□□□ -0.3
SH2D4A-204ENST00000519207 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
SH2D4A-204ENST00000519207 NGEFQ8N5V2 710 aa13.19□□□□□ -0.3
SH2D4A-204ENST00000519207 C14orf93Q9H972 538 aaKnown RBP13.19□□□□□ -0.3
SH2D4A-204ENST00000519207 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
SH2D4A-204ENST00000519207 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
SH2D4A-204ENST00000519207 GSE1Q14687 1217 aa13.18□□□□□ -0.3
SH2D4A-204ENST00000519207 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
SH2D4A-204ENST00000519207 CPS1P31327 1500 aa13.18□□□□□ -0.3
SH2D4A-204ENST00000519207 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
SH2D4A-204ENST00000519207 ADGRB1O14514 1584 aa13.16□□□□□ -0.3
SH2D4A-204ENST00000519207 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
SH2D4A-204ENST00000519207 TOM1O60784 492 aa13.16□□□□□ -0.3
SH2D4A-204ENST00000519207 MS4A1P11836 297 aa13.16□□□□□ -0.3
SH2D4A-204ENST00000519207 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
SH2D4A-204ENST00000519207 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
SH2D4A-204ENST00000519207 LTKP29376 864 aa13.15□□□□□ -0.3
SH2D4A-204ENST00000519207 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
SH2D4A-204ENST00000519207 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.3
SH2D4A-204ENST00000519207 PIK3C2BO00750 1634 aa13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 PLIN1O60240 522 aa13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 HSPA1LP34931 641 aa13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 BACH2Q9BYV9 841 aa13.14□□□□□ -0.31
SH2D4A-204ENST00000519207 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
SH2D4A-204ENST00000519207 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
SH2D4A-204ENST00000519207 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
SH2D4A-204ENST00000519207 USP32Q8NFA0 1604 aa13.12□□□□□ -0.31
SH2D4A-204ENST00000519207 SOCS7O14512 581 aa13.11□□□□□ -0.31
SH2D4A-204ENST00000519207 IDI1Q13907 227 aa13.11□□□□□ -0.31
SH2D4A-204ENST00000519207 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
SH2D4A-204ENST00000519207 TRAK1Q9UPV9 953 aa13.11□□□□□ -0.31
SH2D4A-204ENST00000519207 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
SH2D4A-204ENST00000519207 VGFO15240 615 aaPredicted RBP13.11□□□□□ -0.31
SH2D4A-204ENST00000519207 LAS1LQ9Y4W2 734 aaKnown RBP13.11□□□□□ -0.31
SH2D4A-204ENST00000519207 STRCP1A6NGW2 1772 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 NSD3Q9BZ95 1437 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 SLIT1O75093 1534 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 E9PSI1 815 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 APAF1O14727 1248 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 PDE4AP27815 886 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 EID1Q9Y6B2 187 aa13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
SH2D4A-204ENST00000519207 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
SH2D4A-204ENST00000519207 NEXMIFQ5QGS0 1516 aa13.09□□□□□ -0.31
SH2D4A-204ENST00000519207 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
SH2D4A-204ENST00000519207 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
SH2D4A-204ENST00000519207 ALKQ9UM73 1620 aa13.09□□□□□ -0.31
SH2D4A-204ENST00000519207 TMEM2Q9UHN6 1383 aa13.09□□□□□ -0.31
SH2D4A-204ENST00000519207 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
SH2D4A-204ENST00000519207 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
SH2D4A-204ENST00000519207 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms