RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 ABCA3Q99758 1704 aa4.23□□□□□ -1.73
RNU1-48P-201ENST00000516400 ZNF644Q9H582 1327 aaPredicted RBP4.22□□□□□ -1.73
RNU1-48P-201ENST00000516400 SF3B2Q13435 895 aaKnown RBP4.22□□□□□ -1.73
RNU1-48P-201ENST00000516400 EID1Q9Y6B2 187 aa4.22□□□□□ -1.73
RNU1-48P-201ENST00000516400 PLEKHG1Q9ULL1 1385 aa4.22□□□□□ -1.73
RNU1-48P-201ENST00000516400 PLEKHH2Q8IVE3 1493 aa4.22□□□□□ -1.73
RNU1-48P-201ENST00000516400 PXDNQ92626 1479 aa4.22□□□□□ -1.73
RNU1-48P-201ENST00000516400 CLIP1P30622 1438 aa4.21□□□□□ -1.73
RNU1-48P-201ENST00000516400 TNS2Q63HR2 1409 aa4.21□□□□□ -1.73
RNU1-48P-201ENST00000516400 ATF3P18847 181 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 VPS72Q15906 364 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 CDK11AQ9UQ88 783 aaPredicted RBP4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 PARD3Q8TEW0 1356 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 PIK3R4Q99570 1358 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 MAP3K5Q99683 1374 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 C1orf167Q5SNV9 1468 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 NOS1P29475 1434 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 FMN1Q68DA7 1419 aa4.21□□□□□ -1.74
RNU1-48P-201ENST00000516400 GCC2Q8IWJ2 1684 aa4.2□□□□□ -1.74
RNU1-48P-201ENST00000516400 ADCY9O60503 1353 aa4.2□□□□□ -1.74
RNU1-48P-201ENST00000516400 FAM182BQ5T319 152 aa4.2□□□□□ -1.74
RNU1-48P-201ENST00000516400 TNS4Q8IZW8 715 aa4.2□□□□□ -1.74
RNU1-48P-201ENST00000516400 FHDC1Q9C0D6 1143 aaPredicted RBP4.2□□□□□ -1.74
RNU1-48P-201ENST00000516400 MTUS2Q5JR59 1369 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 PEAK1Q9H792 1746 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 FAM83GA6ND36 823 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 CACNB1Q02641 598 aaPredicted RBP4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 ORAI2Q96SN7 254 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 ZNF777Q9ULD5 760 aaPredicted RBP4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 EHBP1L1Q8N3D4 1523 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 DLC1Q96QB1 1528 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 ADGRL3Q9HAR2 1447 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 ARHGEF5Q12774 1597 aa4.19□□□□□ -1.74
RNU1-48P-201ENST00000516400 COL6A3P12111 3177 aa4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 DCAF8L1A6NGE4 600 aa4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 SUPT5HO00267 1087 aaKnown RBP4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 KIF3CO14782 793 aa4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 PPP1R15AO75807 674 aaPredicted RBP4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 PROM2Q8N271 834 aa4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 ADGRB2O60241 1585 aa4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 ARHGEF28Q8N1W1 1705 aaKnown RBP4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 CRYBG1Q9Y4K1 1723 aa4.18□□□□□ -1.74
RNU1-48P-201ENST00000516400 NEXMIFQ5QGS0 1516 aa4.17□□□□□ -1.74
RNU1-48P-201ENST00000516400 LMTK2Q8IWU2 1503 aa4.17□□□□□ -1.74
RNU1-48P-201ENST00000516400 RGS19P49795 217 aa4.17□□□□□ -1.74
RNU1-48P-201ENST00000516400 ANO8Q9HCE9 1232 aaPredicted RBP4.17□□□□□ -1.74
RNU1-48P-201ENST00000516400 AMOTL2Q9Y2J4 779 aa4.17□□□□□ -1.74
RNU1-48P-201ENST00000516400 RGPD8O14715 1765 aaPredicted RBP4.17□□□□□ -1.74
RNU1-48P-201ENST00000516400 ATP10DQ9P241 1426 aa4.16□□□□□ -1.74
RNU1-48P-201ENST00000516400 TRIM37O94972 964 aa4.16□□□□□ -1.74
RNU1-48P-201ENST00000516400 KLRG1Q96E93 195 aa4.16□□□□□ -1.74
RNU1-48P-201ENST00000516400 PPP1R1BQ9UD71 204 aaPredicted RBP4.16□□□□□ -1.74
RNU1-48P-201ENST00000516400 QSER1Q2KHR3 1735 aa4.15□□□□□ -1.74
RNU1-48P-201ENST00000516400 CASKIN1Q8WXD9 1431 aa4.15□□□□□ -1.74
RNU1-48P-201ENST00000516400 PDE4DIPQ5VU43 2346 aa4.15□□□□□ -1.74
RNU1-48P-201ENST00000516400 APLP1P51693 650 aa4.15□□□□□ -1.75
RNU1-48P-201ENST00000516400 CSRNP3Q8WYN3 585 aa4.15□□□□□ -1.75
RNU1-48P-201ENST00000516400 EHMT2Q96KQ7 1210 aa4.15□□□□□ -1.75
RNU1-48P-201ENST00000516400 CFDP1Q9UEE9 299 aaPredicted RBP4.15□□□□□ -1.75
RNU1-48P-201ENST00000516400 ADGRL2O95490 1459 aa4.15□□□□□ -1.75
RNU1-48P-201ENST00000516400 CCDC18Q5T9S5 1454 aa4.15□□□□□ -1.75
RNU1-48P-201ENST00000516400 CCDC141Q6ZP82 1450 aa4.15□□□□□ -1.75
RNU1-48P-201ENST00000516400 RIMS2Q9UQ26 1411 aa4.14□□□□□ -1.75
RNU1-48P-201ENST00000516400 YBX3P16989 372 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU1-48P-201ENST00000516400 RANGAP1P46060 587 aaPredicted RBP4.14□□□□□ -1.75
RNU1-48P-201ENST00000516400 WWC3Q9ULE0 1092 aa4.14□□□□□ -1.75
RNU1-48P-201ENST00000516400 PAPPAQ13219 1627 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 MKI67P46013 3256 aaKnown RBP4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 ABCC5O15440 1437 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 DUOX2Q9NRD8 1548 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 PLSCR1O15162 318 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 ZBTB7AO95365 584 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 APBA3O96018 575 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 HTRA3P83110 453 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 FAM98CQ17RN3 349 aaKnown RBP4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 ATF5Q9Y2D1 282 aaPredicted RBP4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 TUBGCP6Q96RT7 1819 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 PHRF1Q9P1Y6 1649 aaKnown RBP4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 METP08581 1390 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 KIF1AQ12756 1690 aa4.13□□□□□ -1.75
RNU1-48P-201ENST00000516400 PRAG1Q86YV5 1406 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 COL14A1Q05707 1796 aaKnown RBP4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 SPTBN5Q9NRC6 3674 aaKnown RBP4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 FAM161AQ3B820 660 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 NBPF8Q3BBV2 869 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 NBPF14Q5TI25 921 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 C14orf37Q86TY3 774 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 SLC52A1Q9NWF4 448 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 SPATA31A5Q5VU36 1347 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 SPATA31A3Q5VYP0 1347 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 SPATA31A7Q8IWB4 1347 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 AATKQ6ZMQ8 1374 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 PARP4Q9UKK3 1724 aaKnown RBP4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
RNU1-48P-201ENST00000516400 VIRMAQ69YN4 1812 aaKnown RBP4.11□□□□□ -1.75
RNU1-48P-201ENST00000516400 RPRD2Q5VT52 1461 aaKnown RBP4.11□□□□□ -1.75
RNU1-48P-201ENST00000516400 IQGAP3Q86VI3 1631 aa4.11□□□□□ -1.75
RNU1-48P-201ENST00000516400 RSPH4AQ5TD94 716 aa4.11□□□□□ -1.75
RNU1-48P-201ENST00000516400 FAM196AQ6ZSG2 479 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms