RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 DNAJC5BQ9UF47 199 aa7.11□□□□□ -1.27
RNU1-48P-201ENST00000516400 NISCHQ9Y2I1 1504 aa6.91□□□□□ -1.3
RNU1-48P-201ENST00000516400 ABCC9O60706 1549 aa6.88□□□□□ -1.31
RNU1-48P-201ENST00000516400 DNAJC5Q9H3Z4 198 aa6.83□□□□□ -1.32
RNU1-48P-201ENST00000516400 CCDC180Q9P1Z9 1646 aa6.47□□□□□ -1.37
RNU1-48P-201ENST00000516400 UNC13AQ9UPW8 1703 aa6.41□□□□□ -1.38
RNU1-48P-201ENST00000516400 RB1CC1Q8TDY2 1594 aa6.33□□□□□ -1.4
RNU1-48P-201ENST00000516400 BICRAQ9NZM4 1560 aa6.33□□□□□ -1.4
RNU1-48P-201ENST00000516400 PABPN1Q86U42 306 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU1-48P-201ENST00000516400 CC2D2AQ9P2K1 1620 aa6.27□□□□□ -1.41
RNU1-48P-201ENST00000516400 CECR2Q9BXF3 1484 aa6.26□□□□□ -1.41
RNU1-48P-201ENST00000516400 NACADO15069 1562 aa6.19□□□□□ -1.42
RNU1-48P-201ENST00000516400 CUX2O14529 1486 aa6.17□□□□□ -1.42
RNU1-48P-201ENST00000516400 EIF4G1Q04637 1599 aaKnown RBP6.12□□□□□ -1.43
RNU1-48P-201ENST00000516400 TRIM41Q8WV44 630 aa6.12□□□□□ -1.43
RNU1-48P-201ENST00000516400 SHROOM4Q9ULL8 1493 aa6.05□□□□□ -1.44
RNU1-48P-201ENST00000516400 AEBP2Q6ZN18 517 aaPredicted RBP6.04□□□□□ -1.44
RNU1-48P-201ENST00000516400 MYO15BQ96JP2 1530 aa6□□□□□ -1.45
RNU1-48P-201ENST00000516400 THOC2Q8NI27 1593 aaKnown RBP5.92□□□□□ -1.46
RNU1-48P-201ENST00000516400 ILDR1Q86SU0 546 aaPredicted RBP5.88□□□□□ -1.47
RNU1-48P-201ENST00000516400 ERCC6Q03468 1493 aa5.86□□□□□ -1.47
RNU1-48P-201ENST00000516400 RIMBP3CA6NJZ7 1639 aa5.84□□□□□ -1.47
RNU1-48P-201ENST00000516400 RIMBP3BA6NNM3 1639 aa5.84□□□□□ -1.47
RNU1-48P-201ENST00000516400 RIMBP3Q9UFD9 1639 aa5.84□□□□□ -1.47
RNU1-48P-201ENST00000516400 NESP48681 1621 aa5.83□□□□□ -1.48
RNU1-48P-201ENST00000516400 DCAF8L2P0C7V8 631 aa5.82□□□□□ -1.48
RNU1-48P-201ENST00000516400 BAZ1AQ9NRL2 1556 aaPredicted RBP5.79□□□□□ -1.48
RNU1-48P-201ENST00000516400 KIF21AQ7Z4S6 1674 aa5.78□□□□□ -1.48
RNU1-48P-201ENST00000516400 SCRIBQ14160 1630 aa5.77□□□□□ -1.48
RNU1-48P-201ENST00000516400 NCAPD3P42695 1498 aa5.77□□□□□ -1.49
RNU1-48P-201ENST00000516400 OSCARQ8IYS5 282 aa5.74□□□□□ -1.49
RNU1-48P-201ENST00000516400 ARHGEF11O15085 1522 aa5.73□□□□□ -1.49
RNU1-48P-201ENST00000516400 DCAF1Q9Y4B6 1507 aa5.72□□□□□ -1.49
RNU1-48P-201ENST00000516400 CHIC1Q5VXU3 224 aa5.7□□□□□ -1.5
RNU1-48P-201ENST00000516400 LAMC3Q9Y6N6 1575 aa5.68□□□□□ -1.5
RNU1-48P-201ENST00000516400 WDR62O43379 1518 aa5.68□□□□□ -1.5
RNU1-48P-201ENST00000516400 SMARCA2P51531 1590 aa5.67□□□□□ -1.5
RNU1-48P-201ENST00000516400 ARAP1Q96P48 1450 aa5.64□□□□□ -1.51
RNU1-48P-201ENST00000516400 ATAD2BQ9ULI0 1458 aa5.64□□□□□ -1.51
RNU1-48P-201ENST00000516400 HMGXB3Q12766 1538 aa5.64□□□□□ -1.51
RNU1-48P-201ENST00000516400 TRHP20396 242 aaPredicted RBP5.63□□□□□ -1.51
RNU1-48P-201ENST00000516400 CYB5RLQ6IPT4 315 aa5.63□□□□□ -1.51
RNU1-48P-201ENST00000516400 ZCCHC6Q5VYS8 1495 aaKnown RBP5.61□□□□□ -1.51
RNU1-48P-201ENST00000516400 MRC2Q9UBG0 1479 aa5.59□□□□□ -1.51
RNU1-48P-201ENST00000516400 PDS5BQ9NTI5 1447 aa5.57□□□□□ -1.52
RNU1-48P-201ENST00000516400 KDM4FA0A1W2PPD8 638 aa5.57□□□□□ -1.52
RNU1-48P-201ENST00000516400 SMARCA4P51532 1647 aa5.56□□□□□ -1.52
RNU1-48P-201ENST00000516400 PEG3Q9GZU2 1588 aa5.54□□□□□ -1.52
RNU1-48P-201ENST00000516400 KIF13AQ9H1H9 1805 aa5.53□□□□□ -1.52
RNU1-48P-201ENST00000516400 CHD1O14646 1710 aa5.51□□□□□ -1.53
RNU1-48P-201ENST00000516400 RSF1Q96T23 1441 aaPredicted RBP5.5□□□□□ -1.53
RNU1-48P-201ENST00000516400 ILDR2Q71H61 639 aa5.5□□□□□ -1.53
RNU1-48P-201ENST00000516400 CADPSQ9ULU8 1353 aa5.5□□□□□ -1.53
RNU1-48P-201ENST00000516400 SOCS7O14512 581 aa5.49□□□□□ -1.53
RNU1-48P-201ENST00000516400 ZNF608Q9ULD9 1512 aaPredicted RBP5.48□□□□□ -1.53
RNU1-48P-201ENST00000516400 URB2Q14146 1524 aaKnown RBP5.48□□□□□ -1.53
RNU1-48P-201ENST00000516400 ERCC6L2Q5T890 1561 aa5.47□□□□□ -1.53
RNU1-48P-201ENST00000516400 FBXO41Q8TF61 875 aa5.47□□□□□ -1.53
RNU1-48P-201ENST00000516400 BAZ1BQ9UIG0 1483 aaKnown RBP5.46□□□□□ -1.53
RNU1-48P-201ENST00000516400 LMTK3Q96Q04 1460 aa5.45□□□□□ -1.54
RNU1-48P-201ENST00000516400 CLASP1Q7Z460 1538 aa5.44□□□□□ -1.54
RNU1-48P-201ENST00000516400 HECW2Q9P2P5 1572 aa5.44□□□□□ -1.54
RNU1-48P-201ENST00000516400 CEP164Q9UPV0 1460 aa5.43□□□□□ -1.54
RNU1-48P-201ENST00000516400 FANCD2Q9BXW9 1451 aa5.41□□□□□ -1.54
RNU1-48P-201ENST00000516400 EIF4G3O43432 1585 aaKnown RBP5.41□□□□□ -1.54
RNU1-48P-201ENST00000516400 TARBP1Q13395 1621 aaKnown RBP5.37□□□□□ -1.55
RNU1-48P-201ENST00000516400 CFTRP13569 1480 aa5.37□□□□□ -1.55
RNU1-48P-201ENST00000516400 IFT140Q96RY7 1462 aa5.37□□□□□ -1.55
RNU1-48P-201ENST00000516400 AQRO60306 1485 aaKnown RBP eCLIP5.34□□□□□ -1.55
RNU1-48P-201ENST00000516400 PRDM2Q13029 1718 aa5.34□□□□□ -1.56
RNU1-48P-201ENST00000516400 MROH2BQ7Z745 1585 aa5.33□□□□□ -1.56
RNU1-48P-201ENST00000516400 SYNJ2O15056 1496 aa5.33□□□□□ -1.56
RNU1-48P-201ENST00000516400 GAPVD1Q14C86 1478 aa5.33□□□□□ -1.56
RNU1-48P-201ENST00000516400 ADGRL1O94910 1474 aa5.32□□□□□ -1.56
RNU1-48P-201ENST00000516400 KDM6BO15054 1643 aa5.3□□□□□ -1.56
RNU1-48P-201ENST00000516400 TOPBP1Q92547 1522 aa5.29□□□□□ -1.56
RNU1-48P-201ENST00000516400 ABCC10Q5T3U5 1492 aa5.28□□□□□ -1.56
RNU1-48P-201ENST00000516400 DIP2BQ9P265 1576 aa5.28□□□□□ -1.56
RNU1-48P-201ENST00000516400 PPRC1Q5VV67 1664 aaKnown RBP5.28□□□□□ -1.56
RNU1-48P-201ENST00000516400 SYNJ1O43426 1573 aa5.27□□□□□ -1.57
RNU1-48P-201ENST00000516400 TSPOAP1O95153 1857 aa5.26□□□□□ -1.57
RNU1-48P-201ENST00000516400 WIZO95785 1651 aa5.26□□□□□ -1.57
RNU1-48P-201ENST00000516400 DISP3Q9P2K9 1392 aa5.26□□□□□ -1.57
RNU1-48P-201ENST00000516400 SHROOM2Q13796 1616 aa5.24□□□□□ -1.57
RNU1-48P-201ENST00000516400 COL17A1Q9UMD9 1497 aaPredicted RBP5.24□□□□□ -1.57
RNU1-48P-201ENST00000516400 MAPKBP1O60336 1514 aa5.23□□□□□ -1.57
RNU1-48P-201ENST00000516400 FBLN2P98095 1184 aa5.23□□□□□ -1.57
RNU1-48P-201ENST00000516400 SENP3Q9H4L4 574 aaPredicted RBP5.23□□□□□ -1.57
RNU1-48P-201ENST00000516400 SPATA31D1Q6ZQQ2 1576 aa5.22□□□□□ -1.57
RNU1-48P-201ENST00000516400 SNAPC4Q5SXM2 1469 aa5.22□□□□□ -1.57
RNU1-48P-201ENST00000516400 CEP170Q5SW79 1584 aa5.21□□□□□ -1.57
RNU1-48P-201ENST00000516400 DNMBPQ6XZF7 1577 aa5.21□□□□□ -1.58
RNU1-48P-201ENST00000516400 POLA1P09884 1462 aaPredicted RBP5.2□□□□□ -1.58
RNU1-48P-201ENST00000516400 WDR97A6NE52 1622 aa5.2□□□□□ -1.58
RNU1-48P-201ENST00000516400 FAM69CQ0P6D2 419 aa5.2□□□□□ -1.58
RNU1-48P-201ENST00000516400 MAGI1Q96QZ7 1491 aaPredicted RBP5.2□□□□□ -1.58
RNU1-48P-201ENST00000516400 SRCAPQ6ZRS2 3230 aa5.19□□□□□ -1.58
RNU1-48P-201ENST00000516400 ABCC8Q09428 1581 aa5.19□□□□□ -1.58
RNU1-48P-201ENST00000516400 RAD54L2Q9Y4B4 1467 aa5.19□□□□□ -1.58
RNU1-48P-201ENST00000516400 TDRD9Q8NDG6 1382 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms