RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CARD14Q9BXL6 1004 aa17.51■□□□□ 0.39
PVT1-203ENST00000513868 POGKQ9P215 609 aa17.51■□□□□ 0.39
PVT1-203ENST00000513868 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
PVT1-203ENST00000513868 PLEKHH1Q9ULM0 1364 aa17.5■□□□□ 0.39
PVT1-203ENST00000513868 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
PVT1-203ENST00000513868 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
PVT1-203ENST00000513868 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
PVT1-203ENST00000513868 EID1Q9Y6B2 187 aa17.49■□□□□ 0.39
PVT1-203ENST00000513868 MINK1Q8N4C8 1332 aaPredicted RBP17.49■□□□□ 0.39
PVT1-203ENST00000513868 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
PVT1-203ENST00000513868 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
PVT1-203ENST00000513868 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
PVT1-203ENST00000513868 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
PVT1-203ENST00000513868 USP32Q8NFA0 1604 aa17.48■□□□□ 0.39
PVT1-203ENST00000513868 DIP2AQ14689 1571 aa17.47■□□□□ 0.39
PVT1-203ENST00000513868 BCANQ96GW7 911 aa17.47■□□□□ 0.39
PVT1-203ENST00000513868 FAM9BQ8IZU0 186 aa17.46■□□□□ 0.39
PVT1-203ENST00000513868 PTPRUQ92729 1446 aa17.46■□□□□ 0.38
PVT1-203ENST00000513868 NLRP13Q86W25 1043 aa17.45■□□□□ 0.38
PVT1-203ENST00000513868 PNISRQ8TF01 805 aaKnown RBP17.45■□□□□ 0.38
PVT1-203ENST00000513868 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.45■□□□□ 0.38
PVT1-203ENST00000513868 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
PVT1-203ENST00000513868 SLC26A8Q96RN1 970 aa17.44■□□□□ 0.38
PVT1-203ENST00000513868 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
PVT1-203ENST00000513868 CDK19Q9BWU1 502 aa17.43■□□□□ 0.38
PVT1-203ENST00000513868 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
PVT1-203ENST00000513868 ANKRD36BQ8N2N9 1353 aa17.43■□□□□ 0.38
PVT1-203ENST00000513868 ROBO2Q9HCK4 1378 aa17.43■□□□□ 0.38
PVT1-203ENST00000513868 NINLQ9Y2I6 1382 aa17.43■□□□□ 0.38
PVT1-203ENST00000513868 XRN1Q8IZH2 1706 aaKnown RBP17.42■□□□□ 0.38
PVT1-203ENST00000513868 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
PVT1-203ENST00000513868 NSD3Q9BZ95 1437 aa17.42■□□□□ 0.38
PVT1-203ENST00000513868 CD163L1Q9NR16 1453 aa17.42■□□□□ 0.38
PVT1-203ENST00000513868 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
PVT1-203ENST00000513868 ADGRB2O60241 1585 aa17.41■□□□□ 0.38
PVT1-203ENST00000513868 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
PVT1-203ENST00000513868 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
PVT1-203ENST00000513868 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
PVT1-203ENST00000513868 A0A1W2PP64 1363 aa17.38■□□□□ 0.37
PVT1-203ENST00000513868 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
PVT1-203ENST00000513868 WASLO00401 505 aaPredicted RBP17.38■□□□□ 0.37
PVT1-203ENST00000513868 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
PVT1-203ENST00000513868 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
PVT1-203ENST00000513868 ANKLE2Q86XL3 938 aa17.36■□□□□ 0.37
PVT1-203ENST00000513868 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
PVT1-203ENST00000513868 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
PVT1-203ENST00000513868 PIK3R4Q99570 1358 aa17.34■□□□□ 0.37
PVT1-203ENST00000513868 TOPAZ1Q8N9V7 1692 aa17.34■□□□□ 0.37
PVT1-203ENST00000513868 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
PVT1-203ENST00000513868 ATP7BP35670 1465 aa17.34■□□□□ 0.37
PVT1-203ENST00000513868 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.37
PVT1-203ENST00000513868 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.36
PVT1-203ENST00000513868 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
PVT1-203ENST00000513868 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
PVT1-203ENST00000513868 ZBED9Q6R2W3 1325 aa17.32■□□□□ 0.36
PVT1-203ENST00000513868 RGPD8O14715 1765 aaPredicted RBP17.32■□□□□ 0.36
PVT1-203ENST00000513868 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
PVT1-203ENST00000513868 NSD2O96028 1365 aa17.31■□□□□ 0.36
PVT1-203ENST00000513868 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
PVT1-203ENST00000513868 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
PVT1-203ENST00000513868 NUDT16Q96DE0 195 aaKnown RBP17.3■□□□□ 0.36
PVT1-203ENST00000513868 PRR36Q9H6K5 1346 aa17.3■□□□□ 0.36
PVT1-203ENST00000513868 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
PVT1-203ENST00000513868 INSRP06213 1382 aa17.29■□□□□ 0.36
PVT1-203ENST00000513868 MORC1Q86VD1 984 aa17.29■□□□□ 0.36
PVT1-203ENST00000513868 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
PVT1-203ENST00000513868 KCNA6P17658 529 aa17.28■□□□□ 0.36
PVT1-203ENST00000513868 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
PVT1-203ENST00000513868 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
PVT1-203ENST00000513868 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.36
PVT1-203ENST00000513868 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.36
PVT1-203ENST00000513868 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
PVT1-203ENST00000513868 FYB1O15117 783 aa17.26■□□□□ 0.35
PVT1-203ENST00000513868 NALCNQ8IZF0 1738 aa17.26■□□□□ 0.35
PVT1-203ENST00000513868 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
PVT1-203ENST00000513868 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
PVT1-203ENST00000513868 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
PVT1-203ENST00000513868 ADAMTS8Q9UP79 889 aa17.23■□□□□ 0.35
PVT1-203ENST00000513868 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
PVT1-203ENST00000513868 KDM4FA0A1W2PPD8 638 aa17.23■□□□□ 0.35
PVT1-203ENST00000513868 GGNBP2Q9H3C7 697 aa17.23■□□□□ 0.35
PVT1-203ENST00000513868 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
PVT1-203ENST00000513868 EDC4Q6P2E9 1401 aaKnown RBP17.22■□□□□ 0.35
PVT1-203ENST00000513868 NWD1Q149M9 1564 aa17.22■□□□□ 0.35
PVT1-203ENST00000513868 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
PVT1-203ENST00000513868 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
PVT1-203ENST00000513868 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
PVT1-203ENST00000513868 MTHFSP49914 203 aa17.19■□□□□ 0.34
PVT1-203ENST00000513868 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
PVT1-203ENST00000513868 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
PVT1-203ENST00000513868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.348e-7■■■□□ 17.1
PVT1-203ENST00000513868 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
PVT1-203ENST00000513868 ACEP12821 1306 aa17.17■□□□□ 0.34
PVT1-203ENST00000513868 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
PVT1-203ENST00000513868 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
PVT1-203ENST00000513868 COL3A1P02461 1466 aaPredicted RBP17.15■□□□□ 0.34
PVT1-203ENST00000513868 USP6P35125 1406 aa17.15■□□□□ 0.34
PVT1-203ENST00000513868 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
PVT1-203ENST00000513868 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
PVT1-203ENST00000513868 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms