RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 MED14O60244 1454 aa16.96■□□□□ 0.31
PRDM16-205ENST00000509860 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
PRDM16-205ENST00000509860 SLC12A5Q9H2X9 1139 aa16.95■□□□□ 0.3
PRDM16-205ENST00000509860 BLMP54132 1417 aaPredicted RBP16.95■□□□□ 0.3
PRDM16-205ENST00000509860 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
PRDM16-205ENST00000509860 SAFB2Q14151 953 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRDM16-205ENST00000509860 TECPR2O15040 1411 aa16.94■□□□□ 0.3
PRDM16-205ENST00000509860 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
PRDM16-205ENST00000509860 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.94■□□□□ 0.3
PRDM16-205ENST00000509860 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
PRDM16-205ENST00000509860 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
PRDM16-205ENST00000509860 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
PRDM16-205ENST00000509860 LTKP29376 864 aa16.93■□□□□ 0.3
PRDM16-205ENST00000509860 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
PRDM16-205ENST00000509860 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
PRDM16-205ENST00000509860 TMC1Q8TDI8 760 aa16.93■□□□□ 0.3
PRDM16-205ENST00000509860 CABP2Q9NPB3 220 aa16.92■□□□□ 0.3
PRDM16-205ENST00000509860 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
PRDM16-205ENST00000509860 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
PRDM16-205ENST00000509860 KNSTRNQ9Y448 316 aa16.92■□□□□ 0.3
PRDM16-205ENST00000509860 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
PRDM16-205ENST00000509860 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
PRDM16-205ENST00000509860 PTPRUQ92729 1446 aa16.9■□□□□ 0.3
PRDM16-205ENST00000509860 CEP170BQ9Y4F5 1589 aaPredicted RBP16.9■□□□□ 0.3
PRDM16-205ENST00000509860 EVC2Q86UK5 1308 aa16.89■□□□□ 0.29
PRDM16-205ENST00000509860 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
PRDM16-205ENST00000509860 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
PRDM16-205ENST00000509860 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
PRDM16-205ENST00000509860 PLEKHG1Q9ULL1 1385 aa16.89■□□□□ 0.29
PRDM16-205ENST00000509860 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
PRDM16-205ENST00000509860 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
PRDM16-205ENST00000509860 TOPAZ1Q8N9V7 1692 aa16.88■□□□□ 0.29
PRDM16-205ENST00000509860 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
PRDM16-205ENST00000509860 INSRP06213 1382 aa16.87■□□□□ 0.29
PRDM16-205ENST00000509860 XRN1Q8IZH2 1706 aaKnown RBP16.86■□□□□ 0.29
PRDM16-205ENST00000509860 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
PRDM16-205ENST00000509860 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRDM16-205ENST00000509860 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
PRDM16-205ENST00000509860 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
PRDM16-205ENST00000509860 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
PRDM16-205ENST00000509860 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
PRDM16-205ENST00000509860 SMG6Q86US8 1419 aaKnown RBP16.84■□□□□ 0.29
PRDM16-205ENST00000509860 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
PRDM16-205ENST00000509860 DIP2AQ14689 1571 aa16.82■□□□□ 0.28
PRDM16-205ENST00000509860 NRKQ7Z2Y5 1582 aa16.82■□□□□ 0.28
PRDM16-205ENST00000509860 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
PRDM16-205ENST00000509860 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
PRDM16-205ENST00000509860 TXNDC2Q86VQ3 553 aa16.8■□□□□ 0.28
PRDM16-205ENST00000509860 ATP7BP35670 1465 aa16.8■□□□□ 0.28
PRDM16-205ENST00000509860 ATAD2Q6PL18 1390 aa16.8■□□□□ 0.28
PRDM16-205ENST00000509860 POGKQ9P215 609 aa16.8■□□□□ 0.28
PRDM16-205ENST00000509860 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
PRDM16-205ENST00000509860 CDC42BPGQ6DT37 1551 aa16.79■□□□□ 0.28
PRDM16-205ENST00000509860 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
PRDM16-205ENST00000509860 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
PRDM16-205ENST00000509860 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
PRDM16-205ENST00000509860 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
PRDM16-205ENST00000509860 COL3A1P02461 1466 aaPredicted RBP16.78■□□□□ 0.28
PRDM16-205ENST00000509860 SIRT1Q96EB6 747 aa16.78■□□□□ 0.28
PRDM16-205ENST00000509860 FKBP8Q14318 412 aa16.77■□□□□ 0.27
PRDM16-205ENST00000509860 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
PRDM16-205ENST00000509860 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
PRDM16-205ENST00000509860 CHD2O14647 1828 aaKnown RBP16.76■□□□□ 0.27
PRDM16-205ENST00000509860 NKTRP30414 1462 aaKnown RBP16.76■□□□□ 0.27
PRDM16-205ENST00000509860 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
PRDM16-205ENST00000509860 NSD2O96028 1365 aa16.75■□□□□ 0.27
PRDM16-205ENST00000509860 CABP1Q9NZU7 370 aa16.75■□□□□ 0.27
PRDM16-205ENST00000509860 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
PRDM16-205ENST00000509860 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
PRDM16-205ENST00000509860 CGNL1Q0VF96 1302 aa16.74■□□□□ 0.27
PRDM16-205ENST00000509860 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
PRDM16-205ENST00000509860 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
PRDM16-205ENST00000509860 PPIP5K1Q6PFW1 1433 aa16.73■□□□□ 0.27
PRDM16-205ENST00000509860 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
PRDM16-205ENST00000509860 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
PRDM16-205ENST00000509860 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
PRDM16-205ENST00000509860 ZNF521Q96K83 1311 aa16.73■□□□□ 0.27
PRDM16-205ENST00000509860 FYB1O15117 783 aa16.72■□□□□ 0.27
PRDM16-205ENST00000509860 HDGFP51858 240 aaKnown RBP16.72■□□□□ 0.27
PRDM16-205ENST00000509860 TNNT2P45379 298 aaPredicted RBP16.71■□□□□ 0.27
PRDM16-205ENST00000509860 CDCA7LQ96GN5 454 aa16.71■□□□□ 0.27
PRDM16-205ENST00000509860 MAP2P11137 1827 aaKnown RBP16.7■□□□□ 0.26
PRDM16-205ENST00000509860 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
PRDM16-205ENST00000509860 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
PRDM16-205ENST00000509860 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
PRDM16-205ENST00000509860 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
PRDM16-205ENST00000509860 MARF1Q9Y4F3 1742 aaKnown RBP16.69■□□□□ 0.26
PRDM16-205ENST00000509860 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
PRDM16-205ENST00000509860 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
PRDM16-205ENST00000509860 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
PRDM16-205ENST00000509860 TBX22Q9Y458 520 aa16.68■□□□□ 0.26
PRDM16-205ENST00000509860 SETD1BQ9UPS6 1966 aaKnown RBP16.68■□□□□ 0.26
PRDM16-205ENST00000509860 MTHFSP49914 203 aa16.67■□□□□ 0.26
PRDM16-205ENST00000509860 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
PRDM16-205ENST00000509860 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
PRDM16-205ENST00000509860 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
PRDM16-205ENST00000509860 AMOTL2Q9Y2J4 779 aa16.66■□□□□ 0.26
PRDM16-205ENST00000509860 EDC4Q6P2E9 1401 aaKnown RBP16.65■□□□□ 0.26
PRDM16-205ENST00000509860 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
PRDM16-205ENST00000509860 SSH2Q76I76 1423 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms