RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
KDM3B-205ENST00000508386 NRXN3Q9Y4C0 1643 aa9.03□□□□□ -0.96
KDM3B-205ENST00000508386 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
KDM3B-205ENST00000508386 TRPM2O94759 1503 aa9.03□□□□□ -0.96
KDM3B-205ENST00000508386 ADGRL2O95490 1459 aa9.02□□□□□ -0.96
KDM3B-205ENST00000508386 ORAI2Q96SN7 254 aa9.02□□□□□ -0.97
KDM3B-205ENST00000508386 USP21Q9UK80 565 aa9.02□□□□□ -0.97
KDM3B-205ENST00000508386 ATRNO75882 1429 aa9.02□□□□□ -0.97
KDM3B-205ENST00000508386 ANKRD50Q9ULJ7 1429 aa9.02□□□□□ -0.97
KDM3B-205ENST00000508386 UNC13BO14795 1591 aa9.02□□□□□ -0.97
KDM3B-205ENST00000508386 XRN1Q8IZH2 1706 aaKnown RBP9.02□□□□□ -0.97
KDM3B-205ENST00000508386 SOS2Q07890 1332 aaPredicted RBP9.02□□□□□ -0.97
KDM3B-205ENST00000508386 POTEHQ6S545 545 aa9.01□□□□□ -0.97
KDM3B-205ENST00000508386 BCL9LQ86UU0 1499 aa9.01□□□□□ -0.97
KDM3B-205ENST00000508386 E9PCH4 1651 aa9□□□□□ -0.97
KDM3B-205ENST00000508386 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
KDM3B-205ENST00000508386 TRPC5Q9UL62 973 aaPredicted RBP9□□□□□ -0.97
KDM3B-205ENST00000508386 C1orf167Q5SNV9 1468 aa9□□□□□ -0.97
KDM3B-205ENST00000508386 ADGRL3Q9HAR2 1447 aa8.99□□□□□ -0.97
KDM3B-205ENST00000508386 DEFB132Q7Z7B7 95 aa8.99□□□□□ -0.97
KDM3B-205ENST00000508386 LAMC1P11047 1609 aa8.98□□□□□ -0.97
KDM3B-205ENST00000508386 NALCNQ8IZF0 1738 aa8.97□□□□□ -0.97
KDM3B-205ENST00000508386 PTCH1Q13635 1447 aa8.97□□□□□ -0.97
KDM3B-205ENST00000508386 MYOM2P54296 1465 aa8.96□□□□□ -0.97
KDM3B-205ENST00000508386 CCDC125Q86Z20 511 aa8.96□□□□□ -0.98
KDM3B-205ENST00000508386 GJD4Q96KN9 370 aaPredicted RBP8.96□□□□□ -0.98
KDM3B-205ENST00000508386 ROBO2Q9HCK4 1378 aa8.96□□□□□ -0.98
KDM3B-205ENST00000508386 FAM50AQ14320 339 aaKnown RBP8.95□□□□□ -0.98
KDM3B-205ENST00000508386 XPCQ01831 940 aaPredicted RBP8.94□□□□□ -0.98
KDM3B-205ENST00000508386 AKT1S1Q96B36 256 aa8.94□□□□□ -0.98
KDM3B-205ENST00000508386 COL22A1Q8NFW1 1626 aaPredicted RBP8.94□□□□□ -0.98
KDM3B-205ENST00000508386 NUP155O75694 1391 aa8.93□□□□□ -0.98
KDM3B-205ENST00000508386 GLI3P10071 1580 aa8.93□□□□□ -0.98
KDM3B-205ENST00000508386 IQGAP3Q86VI3 1631 aa8.93□□□□□ -0.98
KDM3B-205ENST00000508386 RALGAPBQ86X10 1494 aa8.92□□□□□ -0.98
KDM3B-205ENST00000508386 PXDNQ92626 1479 aa8.92□□□□□ -0.98
KDM3B-205ENST00000508386 BLMP54132 1417 aaPredicted RBP8.92□□□□□ -0.98
KDM3B-205ENST00000508386 ZNF326Q5BKZ1 582 aaKnown RBP8.92□□□□□ -0.98
KDM3B-205ENST00000508386 NEXMIFQ5QGS0 1516 aa8.91□□□□□ -0.98
KDM3B-205ENST00000508386 PSDA5PKW4 1024 aaPredicted RBP8.91□□□□□ -0.98
KDM3B-205ENST00000508386 FOXO3O43524 673 aa8.91□□□□□ -0.98
KDM3B-205ENST00000508386 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
KDM3B-205ENST00000508386 BRWD3Q6RI45 1802 aa8.91□□□□□ -0.98
KDM3B-205ENST00000508386 SLIT2O94813 1529 aa8.9□□□□□ -0.98
KDM3B-205ENST00000508386 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
KDM3B-205ENST00000508386 HRCP23327 699 aa8.9□□□□□ -0.98
KDM3B-205ENST00000508386 ESCO1Q5FWF5 840 aa8.9□□□□□ -0.98
KDM3B-205ENST00000508386 SEPT12Q8IYM1 358 aa8.89□□□□□ -0.99
KDM3B-205ENST00000508386 LRP5O75197 1615 aa8.89□□□□□ -0.99
KDM3B-205ENST00000508386 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
KDM3B-205ENST00000508386 CHRDL2Q6WN34 429 aa8.88□□□□□ -0.99
KDM3B-205ENST00000508386 MARF1Q9Y4F3 1742 aaKnown RBP8.88□□□□□ -0.99
KDM3B-205ENST00000508386 PRAG1Q86YV5 1406 aa8.88□□□□□ -0.99
KDM3B-205ENST00000508386 NPHP3Q7Z494 1330 aa8.87□□□□□ -0.99
KDM3B-205ENST00000508386 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
KDM3B-205ENST00000508386 WAPLQ7Z5K2 1190 aa8.87□□□□□ -0.99
KDM3B-205ENST00000508386 CLTCL1P53675 1640 aa8.87□□□□□ -0.99
KDM3B-205ENST00000508386 SPATA31A3Q5VYP0 1347 aa8.86□□□□□ -0.99
KDM3B-205ENST00000508386 CABLES1Q8TDN4 633 aa8.86□□□□□ -0.99
KDM3B-205ENST00000508386 SPHKAPQ2M3C7 1700 aa8.85□□□□□ -0.99
KDM3B-205ENST00000508386 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
KDM3B-205ENST00000508386 VPS72Q15906 364 aa8.85□□□□□ -0.99
KDM3B-205ENST00000508386 UTRNP46939 3433 aa8.85□□□□□ -0.99
KDM3B-205ENST00000508386 HFM1A2PYH4 1435 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 FAM83GA6ND36 823 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 SPDYE2BA6NHP3 402 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 SPDYE6P0CI01 402 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 EN1Q05925 392 aaPredicted RBP8.84□□□□□ -0.99
KDM3B-205ENST00000508386 SPDYE2Q495Y8 402 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 FAM182BQ5T319 152 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 KRT27Q7Z3Y8 459 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 PLEKHH1Q9ULM0 1364 aa8.84□□□□□ -0.99
KDM3B-205ENST00000508386 NAIPQ13075 1403 aa8.83□□□□□ -1
KDM3B-205ENST00000508386 SPDYE4A6NLX3 237 aa8.83□□□□□ -1
KDM3B-205ENST00000508386 VGFO15240 615 aaPredicted RBP8.83□□□□□ -1
KDM3B-205ENST00000508386 ITGAEP38570 1179 aa8.83□□□□□ -1
KDM3B-205ENST00000508386 FKBP8Q14318 412 aa8.83□□□□□ -1
KDM3B-205ENST00000508386 R3HDM1Q15032 1099 aaKnown RBP8.83□□□□□ -1
KDM3B-205ENST00000508386 CDC42BPGQ6DT37 1551 aa8.82□□□□□ -1
KDM3B-205ENST00000508386 PLEKHG5O94827 1062 aa8.82□□□□□ -1
KDM3B-205ENST00000508386 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
KDM3B-205ENST00000508386 KRT28Q7Z3Y7 464 aa8.82□□□□□ -1
KDM3B-205ENST00000508386 REM2Q8IYK8 340 aaPredicted RBP8.82□□□□□ -1
KDM3B-205ENST00000508386 ADGRF5Q8IZF2 1346 aa8.81□□□□□ -1
KDM3B-205ENST00000508386 USP32Q8NFA0 1604 aa8.81□□□□□ -1
KDM3B-205ENST00000508386 ZNF692Q9BU19 519 aaPredicted RBP8.81□□□□□ -1
KDM3B-205ENST00000508386 STK26Q9P289 416 aa8.81□□□□□ -1
KDM3B-205ENST00000508386 EZH2Q15910 746 aaKnown RBP8.8□□□□□ -1
KDM3B-205ENST00000508386 FAM98CQ17RN3 349 aaKnown RBP8.8□□□□□ -1
KDM3B-205ENST00000508386 TMEM132EQ6IEE7 984 aa8.8□□□□□ -1
KDM3B-205ENST00000508386 LRPPRCP42704 1394 aaKnown RBP8.79□□□□□ -1
KDM3B-205ENST00000508386 BAG6P46379 1132 aa8.79□□□□□ -1
KDM3B-205ENST00000508386 CAMKK2Q96RR4 588 aa8.79□□□□□ -1
KDM3B-205ENST00000508386 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
KDM3B-205ENST00000508386 TECPR2O15040 1411 aa8.79□□□□□ -1
KDM3B-205ENST00000508386 RPGRIP1LQ68CZ1 1315 aa8.79□□□□□ -1
KDM3B-205ENST00000508386 KIF1BO60333 1816 aa8.78□□□□□ -1
KDM3B-205ENST00000508386 PLCH1Q4KWH8 1693 aa8.78□□□□□ -1
KDM3B-205ENST00000508386 ABCC11Q96J66 1382 aa8.77□□□□□ -1.01
KDM3B-205ENST00000508386 RGPD8O14715 1765 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms