RNA–Protein interactions for RNA: ENST00000505072.5

ATP2C1-209, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 556 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-209ENST00000505072 PRAG1Q86YV5 1406 aa18.58■□□□□ 0.57
ATP2C1-209ENST00000505072 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.57
ATP2C1-209ENST00000505072 NPHP3Q7Z494 1330 aa18.58■□□□□ 0.57
ATP2C1-209ENST00000505072 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.56■□□□□ 0.56
ATP2C1-209ENST00000505072 PXDNQ92626 1479 aa18.56■□□□□ 0.56
ATP2C1-209ENST00000505072 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
ATP2C1-209ENST00000505072 LRP5O75197 1615 aa18.55■□□□□ 0.56
ATP2C1-209ENST00000505072 CLTCL1P53675 1640 aa18.55■□□□□ 0.56
ATP2C1-209ENST00000505072 RALGAPBQ86X10 1494 aa18.54■□□□□ 0.56
ATP2C1-209ENST00000505072 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
ATP2C1-209ENST00000505072 GLI3P10071 1580 aa18.53■□□□□ 0.56
ATP2C1-209ENST00000505072 ESCO1Q5FWF5 840 aa18.53■□□□□ 0.56
ATP2C1-209ENST00000505072 UNC5CLQ8IV45 518 aa18.53■□□□□ 0.56
ATP2C1-209ENST00000505072 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
ATP2C1-209ENST00000505072 SF3B2Q13435 895 aaKnown RBP18.52■□□□□ 0.56
ATP2C1-209ENST00000505072 SLIT2O94813 1529 aa18.52■□□□□ 0.56
ATP2C1-209ENST00000505072 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
ATP2C1-209ENST00000505072 FOXO3O43524 673 aa18.5■□□□□ 0.55
ATP2C1-209ENST00000505072 KIF1BO60333 1816 aa18.5■□□□□ 0.55
ATP2C1-209ENST00000505072 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
ATP2C1-209ENST00000505072 XPCQ01831 940 aaPredicted RBP18.49■□□□□ 0.55
ATP2C1-209ENST00000505072 BRWD3Q6RI45 1802 aa18.49■□□□□ 0.55
ATP2C1-209ENST00000505072 SEPT12Q8IYM1 358 aa18.46■□□□□ 0.55
ATP2C1-209ENST00000505072 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
ATP2C1-209ENST00000505072 ITGAEP38570 1179 aa18.45■□□□□ 0.54
ATP2C1-209ENST00000505072 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
ATP2C1-209ENST00000505072 NAIPQ13075 1403 aa18.43■□□□□ 0.54
ATP2C1-209ENST00000505072 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
ATP2C1-209ENST00000505072 ONECUT3O60422 494 aaPredicted RBP18.43■□□□□ 0.54
ATP2C1-209ENST00000505072 VPS72Q15906 364 aa18.43■□□□□ 0.54
ATP2C1-209ENST00000505072 HRCP23327 699 aa18.42■□□□□ 0.54
ATP2C1-209ENST00000505072 KRT27Q7Z3Y8 459 aa18.42■□□□□ 0.54
ATP2C1-209ENST00000505072 PSDA5PKW4 1024 aaPredicted RBP18.41■□□□□ 0.54
ATP2C1-209ENST00000505072 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
ATP2C1-209ENST00000505072 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
ATP2C1-209ENST00000505072 BAG6P46379 1132 aa18.4■□□□□ 0.54
ATP2C1-209ENST00000505072 PPLO60437 1756 aa18.38■□□□□ 0.53
ATP2C1-209ENST00000505072 TECPR2O15040 1411 aa18.38■□□□□ 0.53
ATP2C1-209ENST00000505072 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
ATP2C1-209ENST00000505072 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
ATP2C1-209ENST00000505072 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
ATP2C1-209ENST00000505072 WAPLQ7Z5K2 1190 aa18.37■□□□□ 0.53
ATP2C1-209ENST00000505072 CCDC9Q9Y3X0 531 aaKnown RBP18.37■□□□□ 0.53
ATP2C1-209ENST00000505072 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
ATP2C1-209ENST00000505072 PLCH1Q4KWH8 1693 aa18.35■□□□□ 0.53
ATP2C1-209ENST00000505072 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
ATP2C1-209ENST00000505072 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
ATP2C1-209ENST00000505072 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.52
ATP2C1-209ENST00000505072 STK26Q9P289 416 aa18.33■□□□□ 0.52
ATP2C1-209ENST00000505072 ABCC11Q96J66 1382 aa18.32■□□□□ 0.52
ATP2C1-209ENST00000505072 PLEKHH1Q9ULM0 1364 aa18.32■□□□□ 0.52
ATP2C1-209ENST00000505072 PSME1Q06323 249 aa18.32■□□□□ 0.52
ATP2C1-209ENST00000505072 A0A0G2JS52 829 aa18.31■□□□□ 0.52
ATP2C1-209ENST00000505072 MYT1Q01538 1121 aa18.31■□□□□ 0.52
ATP2C1-209ENST00000505072 ADGRF5Q8IZF2 1346 aa18.3■□□□□ 0.52
ATP2C1-209ENST00000505072 KNDC1Q76NI1 1749 aa18.3■□□□□ 0.52
ATP2C1-209ENST00000505072 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-209ENST00000505072 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
ATP2C1-209ENST00000505072 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
ATP2C1-209ENST00000505072 R3HDM1Q15032 1099 aaKnown RBP18.29■□□□□ 0.52
ATP2C1-209ENST00000505072 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
ATP2C1-209ENST00000505072 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
ATP2C1-209ENST00000505072 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
ATP2C1-209ENST00000505072 ARHGEF10O15013 1369 aa18.29■□□□□ 0.52
ATP2C1-209ENST00000505072 FAM98CQ17RN3 349 aaKnown RBP18.28■□□□□ 0.52
ATP2C1-209ENST00000505072 RGPD1P0DJD0 1748 aa18.28■□□□□ 0.52
ATP2C1-209ENST00000505072 DISP2A7MBM2 1401 aa18.27■□□□□ 0.52
ATP2C1-209ENST00000505072 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
ATP2C1-209ENST00000505072 TMEM132EQ6IEE7 984 aa18.26■□□□□ 0.51
ATP2C1-209ENST00000505072 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
ATP2C1-209ENST00000505072 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
ATP2C1-209ENST00000505072 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
ATP2C1-209ENST00000505072 SIRT1Q96EB6 747 aa18.25■□□□□ 0.51
ATP2C1-209ENST00000505072 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
ATP2C1-209ENST00000505072 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
ATP2C1-209ENST00000505072 ANKRD30BQ9BXX2 1392 aa18.24■□□□□ 0.51
ATP2C1-209ENST00000505072 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
ATP2C1-209ENST00000505072 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
ATP2C1-209ENST00000505072 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
ATP2C1-209ENST00000505072 FAM182BQ5T319 152 aa18.22■□□□□ 0.51
ATP2C1-209ENST00000505072 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
ATP2C1-209ENST00000505072 TNS1Q9HBL0 1735 aaKnown RBP18.21■□□□□ 0.51
ATP2C1-209ENST00000505072 YY1P25490 414 aa18.21■□□□□ 0.51
ATP2C1-209ENST00000505072 EZH2Q15910 746 aaKnown RBP18.21■□□□□ 0.51
ATP2C1-209ENST00000505072 SPATA31A5Q5VU36 1347 aa18.21■□□□□ 0.51
ATP2C1-209ENST00000505072 SPATA31A7Q8IWB4 1347 aa18.21■□□□□ 0.51
ATP2C1-209ENST00000505072 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
ATP2C1-209ENST00000505072 SPATA31E1Q6ZUB1 1445 aa18.2■□□□□ 0.5
ATP2C1-209ENST00000505072 COL14A1Q05707 1796 aaKnown RBP18.19■□□□□ 0.5
ATP2C1-209ENST00000505072 CAMKK2Q96RR4 588 aa18.19■□□□□ 0.5
ATP2C1-209ENST00000505072 THSD7AQ9UPZ6 1657 aa18.18■□□□□ 0.5
ATP2C1-209ENST00000505072 ADGRB2O60241 1585 aa18.18■□□□□ 0.5
ATP2C1-209ENST00000505072 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
ATP2C1-209ENST00000505072 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-209ENST00000505072 PMFBP1Q8TBY8 1022 aa18.16■□□□□ 0.5
ATP2C1-209ENST00000505072 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
ATP2C1-209ENST00000505072 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
ATP2C1-209ENST00000505072 TRIM37O94972 964 aa18.14■□□□□ 0.49
ATP2C1-209ENST00000505072 FAM196AQ6ZSG2 479 aa18.14■□□□□ 0.49
ATP2C1-209ENST00000505072 ALS2Q96Q42 1657 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms