RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 EFCAB2Q5VUJ9 269 aa8.72□□□□□ -1.01
COPB2-204ENST00000504295 KDM3BQ7LBC6 1761 aa8.72□□□□□ -1.01
COPB2-204ENST00000504295 LMTK3Q96Q04 1460 aa8.72□□□□□ -1.01
COPB2-204ENST00000504295 BACH2Q9BYV9 841 aa8.72□□□□□ -1.01
COPB2-204ENST00000504295 ALKQ9UM73 1620 aa8.71□□□□□ -1.01
COPB2-204ENST00000504295 PNPLA6Q8IY17 1366 aa8.71□□□□□ -1.02
COPB2-204ENST00000504295 HNRNPUQ00839 825 aaKnown RBP eCLIP8.71□□□□□ -1.02
COPB2-204ENST00000504295 CFDP1Q9UEE9 299 aaPredicted RBP8.71□□□□□ -1.02
COPB2-204ENST00000504295 LMO7Q8WWI1 1683 aa8.7□□□□□ -1.02
COPB2-204ENST00000504295 SLC4A1APQ9BWU0 796 aaKnown RBP8.7□□□□□ -1.02
COPB2-204ENST00000504295 TSPOAP1O95153 1857 aa8.7□□□□□ -1.02
COPB2-204ENST00000504295 PAK3O75914 559 aaPredicted RBP8.7□□□□□ -1.02
COPB2-204ENST00000504295 DUSP27Q5VZP5 1158 aa8.7□□□□□ -1.02
COPB2-204ENST00000504295 CDK12Q9NYV4 1490 aaPredicted RBP8.69□□□□□ -1.02
COPB2-204ENST00000504295 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
COPB2-204ENST00000504295 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.69□□□□□ -1.02
COPB2-204ENST00000504295 PIK3R4Q99570 1358 aa8.69□□□□□ -1.02
COPB2-204ENST00000504295 PIK3C2AO00443 1686 aa8.69□□□□□ -1.02
COPB2-204ENST00000504295 TECPR2O15040 1411 aa8.68□□□□□ -1.02
COPB2-204ENST00000504295 MYH15Q9Y2K3 1946 aa8.68□□□□□ -1.02
COPB2-204ENST00000504295 ZNF142P52746 1687 aaPredicted RBP8.68□□□□□ -1.02
COPB2-204ENST00000504295 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
COPB2-204ENST00000504295 CHIC2Q9UKJ5 165 aa8.67□□□□□ -1.02
COPB2-204ENST00000504295 ST20-MTHFSA0A0A6YYL1 179 aa8.67□□□□□ -1.02
COPB2-204ENST00000504295 CEP170BQ9Y4F5 1589 aaPredicted RBP8.67□□□□□ -1.02
COPB2-204ENST00000504295 IPO9Q96P70 1041 aaKnown RBP8.66□□□□□ -1.02
COPB2-204ENST00000504295 DDIT3P35638 169 aa8.66□□□□□ -1.02
COPB2-204ENST00000504295 NSD2O96028 1365 aa8.66□□□□□ -1.02
COPB2-204ENST00000504295 GLI3P10071 1580 aa8.65□□□□□ -1.02
COPB2-204ENST00000504295 NWD1Q149M9 1564 aa8.65□□□□□ -1.02
COPB2-204ENST00000504295 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
COPB2-204ENST00000504295 MRS2Q9HD23 443 aa8.64□□□□□ -1.03
COPB2-204ENST00000504295 TCERG1O14776 1098 aaKnown RBP8.64□□□□□ -1.03
COPB2-204ENST00000504295 ATP7BP35670 1465 aa8.64□□□□□ -1.03
COPB2-204ENST00000504295 ABCC11Q96J66 1382 aa8.63□□□□□ -1.03
COPB2-204ENST00000504295 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
COPB2-204ENST00000504295 FAM135BQ49AJ0 1406 aa8.62□□□□□ -1.03
COPB2-204ENST00000504295 SLFN5Q08AF3 891 aa8.62□□□□□ -1.03
COPB2-204ENST00000504295 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
COPB2-204ENST00000504295 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
COPB2-204ENST00000504295 ANTXR1Q9H6X2 564 aa8.61□□□□□ -1.03
COPB2-204ENST00000504295 NOP58Q9Y2X3 529 aaKnown RBP8.61□□□□□ -1.03
COPB2-204ENST00000504295 RGPD8O14715 1765 aaPredicted RBP8.61□□□□□ -1.03
COPB2-204ENST00000504295 CPSF1Q10570 1443 aaKnown RBP8.6□□□□□ -1.03
COPB2-204ENST00000504295 PTCH1Q13635 1447 aa8.6□□□□□ -1.03
COPB2-204ENST00000504295 YTHDC2Q9H6S0 1430 aaKnown RBP8.6□□□□□ -1.03
COPB2-204ENST00000504295 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
COPB2-204ENST00000504295 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
COPB2-204ENST00000504295 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
COPB2-204ENST00000504295 ZNF777Q9ULD5 760 aaPredicted RBP8.59□□□□□ -1.03
COPB2-204ENST00000504295 HNRNPMP52272 730 aaKnown RBP eCLIP8.59□□□□□ -1.03
COPB2-204ENST00000504295 BRPF1P55201 1214 aaPredicted RBP8.59□□□□□ -1.03
COPB2-204ENST00000504295 RGS12O14924 1447 aa8.59□□□□□ -1.03
COPB2-204ENST00000504295 ALS2Q96Q42 1657 aa8.58□□□□□ -1.04
COPB2-204ENST00000504295 PARP4Q9UKK3 1724 aaKnown RBP8.58□□□□□ -1.04
COPB2-204ENST00000504295 ABCC6O95255 1503 aa8.58□□□□□ -1.04
COPB2-204ENST00000504295 TRPM3Q9HCF6 1732 aaPredicted RBP8.58□□□□□ -1.04
COPB2-204ENST00000504295 SSH2Q76I76 1423 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 AK9Q5TCS8 1911 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 BCANQ96GW7 911 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 SPINK5Q9NQ38 1064 aaPredicted RBP8.57□□□□□ -1.04
COPB2-204ENST00000504295 ANKRD36BQ8N2N9 1353 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 TSPY4P0CV99 314 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 TSPY10P0CW01 314 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 EXOC6Q8TAG9 804 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 RCAN3Q9UKA8 241 aa8.57□□□□□ -1.04
COPB2-204ENST00000504295 LTN1O94822 1766 aa8.56□□□□□ -1.04
COPB2-204ENST00000504295 SPAG9O60271 1321 aaKnown RBP8.56□□□□□ -1.04
COPB2-204ENST00000504295 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
COPB2-204ENST00000504295 CARD11Q9BXL7 1154 aa8.56□□□□□ -1.04
COPB2-204ENST00000504295 RAPGEF3O95398 923 aa8.56□□□□□ -1.04
COPB2-204ENST00000504295 PLEKHF1Q96S99 279 aa8.55□□□□□ -1.04
COPB2-204ENST00000504295 CFAP65Q6ZU64 1925 aaKnown RBP8.55□□□□□ -1.04
COPB2-204ENST00000504295 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 NEFLP07196 543 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 PDE4AP27815 886 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 AAMPQ13685 434 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 DAXXQ9UER7 740 aaPredicted RBP8.54□□□□□ -1.04
COPB2-204ENST00000504295 SLIT1O75093 1534 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 IL17RAQ96F46 866 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 CDCA7LQ96GN5 454 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 C20orf194Q5TEA3 1177 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 DMRT2Q9Y5R5 561 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 A2ML1A8K2U0 1454 aa8.54□□□□□ -1.04
COPB2-204ENST00000504295 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.04
COPB2-204ENST00000504295 C14orf93Q9H972 538 aaKnown RBP8.52□□□□□ -1.05
COPB2-204ENST00000504295 UBR2Q8IWV8 1755 aa8.52□□□□□ -1.05
COPB2-204ENST00000504295 AFAP1Q8N556 730 aa8.52□□□□□ -1.05
COPB2-204ENST00000504295 SHANK3Q9BYB0 1731 aa8.52□□□□□ -1.05
COPB2-204ENST00000504295 ARHGAP23Q9P227 1491 aa8.52□□□□□ -1.05
COPB2-204ENST00000504295 CENPQQ7L2Z9 268 aaPredicted RBP8.51□□□□□ -1.05
COPB2-204ENST00000504295 LAMB4A4D0S4 1761 aa8.51□□□□□ -1.05
COPB2-204ENST00000504295 PPP6R1Q9UPN7 881 aa8.51□□□□□ -1.05
COPB2-204ENST00000504295 ADAMTSL3P82987 1691 aa8.51□□□□□ -1.05
COPB2-204ENST00000504295 IRX6P78412 446 aaPredicted RBP8.51□□□□□ -1.05
COPB2-204ENST00000504295 PANK3Q9H999 370 aa8.51□□□□□ -1.05
COPB2-204ENST00000504295 NUP188Q5SRE5 1749 aa8.51□□□□□ -1.05
COPB2-204ENST00000504295 DCAF11Q8TEB1 546 aa8.5□□□□□ -1.05
COPB2-204ENST00000504295 ADAMTS8Q9UP79 889 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms