RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 AMOTL2Q9Y2J4 779 aa13.54□□□□□ -0.24
SFXN1-204ENST00000502865 CPS1P31327 1500 aa13.54□□□□□ -0.24
SFXN1-204ENST00000502865 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
SFXN1-204ENST00000502865 ROBO2Q9HCK4 1378 aa13.53□□□□□ -0.24
SFXN1-204ENST00000502865 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
SFXN1-204ENST00000502865 MIER1Q8N108 512 aa13.52□□□□□ -0.25
SFXN1-204ENST00000502865 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
SFXN1-204ENST00000502865 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
SFXN1-204ENST00000502865 XRN1Q8IZH2 1706 aaKnown RBP13.51□□□□□ -0.25
SFXN1-204ENST00000502865 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
SFXN1-204ENST00000502865 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
SFXN1-204ENST00000502865 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
SFXN1-204ENST00000502865 STRCQ7RTU9 1775 aa13.5□□□□□ -0.25
SFXN1-204ENST00000502865 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.5□□□□□ -0.25
SFXN1-204ENST00000502865 MYOM1P52179 1685 aa13.5□□□□□ -0.25
SFXN1-204ENST00000502865 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
SFXN1-204ENST00000502865 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
SFXN1-204ENST00000502865 EVC2Q86UK5 1308 aa13.48□□□□□ -0.25
SFXN1-204ENST00000502865 KCNA6P17658 529 aa13.48□□□□□ -0.25
SFXN1-204ENST00000502865 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
SFXN1-204ENST00000502865 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
SFXN1-204ENST00000502865 PANK3Q9H999 370 aa13.46□□□□□ -0.25
SFXN1-204ENST00000502865 PUS7Q96PZ0 661 aaKnown RBP13.45□□□□□ -0.26
SFXN1-204ENST00000502865 WASLO00401 505 aaPredicted RBP13.44□□□□□ -0.26
SFXN1-204ENST00000502865 PER1O15534 1290 aaPredicted RBP13.44□□□□□ -0.26
SFXN1-204ENST00000502865 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
SFXN1-204ENST00000502865 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
SFXN1-204ENST00000502865 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
SFXN1-204ENST00000502865 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
SFXN1-204ENST00000502865 ADGRB2O60241 1585 aa13.42□□□□□ -0.26
SFXN1-204ENST00000502865 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
SFXN1-204ENST00000502865 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
SFXN1-204ENST00000502865 ANP32CO43423 234 aa13.41□□□□□ -0.26
SFXN1-204ENST00000502865 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
SFXN1-204ENST00000502865 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
SFXN1-204ENST00000502865 NALCNQ8IZF0 1738 aa13.39□□□□□ -0.27
SFXN1-204ENST00000502865 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
SFXN1-204ENST00000502865 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
SFXN1-204ENST00000502865 NUDT16Q96DE0 195 aaKnown RBP13.38□□□□□ -0.27
SFXN1-204ENST00000502865 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
SFXN1-204ENST00000502865 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
SFXN1-204ENST00000502865 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
SFXN1-204ENST00000502865 CABP1Q9NZU7 370 aa13.37□□□□□ -0.27
SFXN1-204ENST00000502865 USP32Q8NFA0 1604 aa13.37□□□□□ -0.27
SFXN1-204ENST00000502865 RGPD8O14715 1765 aaPredicted RBP13.36□□□□□ -0.27
SFXN1-204ENST00000502865 NUTM2FA1L443 756 aa13.36□□□□□ -0.27
SFXN1-204ENST00000502865 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
SFXN1-204ENST00000502865 ATP7BP35670 1465 aa13.36□□□□□ -0.27
SFXN1-204ENST00000502865 AMER1Q5JTC6 1135 aaPredicted RBP13.35□□□□□ -0.27
SFXN1-204ENST00000502865 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
SFXN1-204ENST00000502865 FMN2Q9NZ56 1722 aa13.35□□□□□ -0.27
SFXN1-204ENST00000502865 TOPAZ1Q8N9V7 1692 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 A0A1W2PP64 1363 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
SFXN1-204ENST00000502865 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
SFXN1-204ENST00000502865 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
SFXN1-204ENST00000502865 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
SFXN1-204ENST00000502865 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
SFXN1-204ENST00000502865 CCDC184Q52MB2 194 aa13.32□□□□□ -0.28
SFXN1-204ENST00000502865 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
SFXN1-204ENST00000502865 AKAP12Q02952 1782 aa13.31□□□□□ -0.28
SFXN1-204ENST00000502865 CCER2I3L3R5 266 aa13.31□□□□□ -0.28
SFXN1-204ENST00000502865 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
SFXN1-204ENST00000502865 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
SFXN1-204ENST00000502865 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
SFXN1-204ENST00000502865 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
SFXN1-204ENST00000502865 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
SFXN1-204ENST00000502865 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
SFXN1-204ENST00000502865 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
SFXN1-204ENST00000502865 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
SFXN1-204ENST00000502865 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
SFXN1-204ENST00000502865 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
SFXN1-204ENST00000502865 RALBP1Q15311 655 aa13.29□□□□□ -0.28
SFXN1-204ENST00000502865 ITSN1Q15811 1721 aa13.29□□□□□ -0.28
SFXN1-204ENST00000502865 ANKARQ7Z5J8 1434 aa13.29□□□□□ -0.28
SFXN1-204ENST00000502865 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
SFXN1-204ENST00000502865 MON2Q7Z3U7 1717 aa13.28□□□□□ -0.28
SFXN1-204ENST00000502865 PMFBP1Q8TBY8 1022 aa13.28□□□□□ -0.28
SFXN1-204ENST00000502865 ACEP12821 1306 aa13.28□□□□□ -0.28
SFXN1-204ENST00000502865 NCOA3Q9Y6Q9 1424 aa13.28□□□□□ -0.28
SFXN1-204ENST00000502865 C19orf44Q9H6X5 657 aa13.27□□□□□ -0.29
SFXN1-204ENST00000502865 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
SFXN1-204ENST00000502865 MYBBP1AQ9BQG0 1328 aaKnown RBP13.25□□□□□ -0.29
SFXN1-204ENST00000502865 FYB1O15117 783 aa13.25□□□□□ -0.29
SFXN1-204ENST00000502865 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
SFXN1-204ENST00000502865 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
SFXN1-204ENST00000502865 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-204ENST00000502865 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
SFXN1-204ENST00000502865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
SFXN1-204ENST00000502865 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
SFXN1-204ENST00000502865 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
SFXN1-204ENST00000502865 NRKQ7Z2Y5 1582 aa13.24□□□□□ -0.29
SFXN1-204ENST00000502865 EDC4Q6P2E9 1401 aaKnown RBP13.23□□□□□ -0.29
SFXN1-204ENST00000502865 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
SFXN1-204ENST00000502865 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms