RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 FAM161AQ3B820 660 aa18.02■□□□□ 0.48
ATP13A1-214ENST00000497556 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.48
ATP13A1-214ENST00000497556 TESK2Q96S53 571 aa18.02■□□□□ 0.47
ATP13A1-214ENST00000497556 RPGRIP1LQ68CZ1 1315 aa18.02■□□□□ 0.47
ATP13A1-214ENST00000497556 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.47
ATP13A1-214ENST00000497556 KTN1Q86UP2 1357 aaKnown RBP18.01■□□□□ 0.47
ATP13A1-214ENST00000497556 PIK3C2GO75747 1445 aa18.01■□□□□ 0.47
ATP13A1-214ENST00000497556 L1TD1Q5T7N2 865 aaKnown RBP18.01■□□□□ 0.47
ATP13A1-214ENST00000497556 NAP1L5Q96NT1 182 aaPredicted RBP18.01■□□□□ 0.47
ATP13A1-214ENST00000497556 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
ATP13A1-214ENST00000497556 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
ATP13A1-214ENST00000497556 RALBP1Q15311 655 aa18■□□□□ 0.47
ATP13A1-214ENST00000497556 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
ATP13A1-214ENST00000497556 HSP90AA1P07900 732 aaKnown RBP17.99■□□□□ 0.47
ATP13A1-214ENST00000497556 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
ATP13A1-214ENST00000497556 SETBP1Q9Y6X0 1596 aa17.98■□□□□ 0.47
ATP13A1-214ENST00000497556 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
ATP13A1-214ENST00000497556 CLCN1P35523 988 aa17.98■□□□□ 0.47
ATP13A1-214ENST00000497556 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
ATP13A1-214ENST00000497556 EIF3AQ14152 1382 aaKnown RBP17.96■□□□□ 0.47
ATP13A1-214ENST00000497556 PER1O15534 1290 aaPredicted RBP17.96■□□□□ 0.47
ATP13A1-214ENST00000497556 NLRP13Q86W25 1043 aa17.96■□□□□ 0.47
ATP13A1-214ENST00000497556 ESF1Q9H501 851 aaKnown RBP17.96■□□□□ 0.47
ATP13A1-214ENST00000497556 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.46
ATP13A1-214ENST00000497556 NUTM2DQ5VT03 806 aaPredicted RBP17.96■□□□□ 0.46
ATP13A1-214ENST00000497556 DNAJC5Q9H3Z4 198 aa17.96■□□□□ 0.46
ATP13A1-214ENST00000497556 TMF1P82094 1093 aa17.95■□□□□ 0.46
ATP13A1-214ENST00000497556 PODXL2Q9NZ53 605 aa17.95■□□□□ 0.46
ATP13A1-214ENST00000497556 CENPQQ7L2Z9 268 aaPredicted RBP17.94■□□□□ 0.46
ATP13A1-214ENST00000497556 ZMYM3Q14202 1370 aa17.94■□□□□ 0.46
ATP13A1-214ENST00000497556 ADGRB1O14514 1584 aa17.94■□□□□ 0.46
ATP13A1-214ENST00000497556 C14orf93Q9H972 538 aaKnown RBP17.93■□□□□ 0.46
ATP13A1-214ENST00000497556 VGFO15240 615 aaPredicted RBP17.93■□□□□ 0.46
ATP13A1-214ENST00000497556 MYO3AQ8NEV4 1616 aa17.92■□□□□ 0.46
ATP13A1-214ENST00000497556 VIRMAQ69YN4 1812 aaKnown RBP17.92■□□□□ 0.46
ATP13A1-214ENST00000497556 ZFYVE9O95405 1425 aa17.91■□□□□ 0.46
ATP13A1-214ENST00000497556 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
ATP13A1-214ENST00000497556 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
ATP13A1-214ENST00000497556 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
ATP13A1-214ENST00000497556 PANK3Q9H999 370 aa17.88■□□□□ 0.45
ATP13A1-214ENST00000497556 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
ATP13A1-214ENST00000497556 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
ATP13A1-214ENST00000497556 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
ATP13A1-214ENST00000497556 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
ATP13A1-214ENST00000497556 FER1L4A9Z1Z3 1794 aa17.87■□□□□ 0.45
ATP13A1-214ENST00000497556 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
ATP13A1-214ENST00000497556 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
ATP13A1-214ENST00000497556 FSD2A1L4K1 749 aa17.86■□□□□ 0.45
ATP13A1-214ENST00000497556 TRAK1Q9UPV9 953 aa17.86■□□□□ 0.45
ATP13A1-214ENST00000497556 MYOM1P52179 1685 aa17.85■□□□□ 0.45
ATP13A1-214ENST00000497556 ASXL1Q8IXJ9 1541 aa17.85■□□□□ 0.45
ATP13A1-214ENST00000497556 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
ATP13A1-214ENST00000497556 USP19O94966 1318 aa17.84■□□□□ 0.45
ATP13A1-214ENST00000497556 TNRQ92752 1358 aa17.84■□□□□ 0.45
ATP13A1-214ENST00000497556 CDCA8Q53HL2 280 aa17.83■□□□□ 0.45
ATP13A1-214ENST00000497556 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.45
ATP13A1-214ENST00000497556 C3P01024 1663 aa17.83■□□□□ 0.45
ATP13A1-214ENST00000497556 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.44
ATP13A1-214ENST00000497556 GOLGA6L3A6NEY3 463 aa17.83■□□□□ 0.44
ATP13A1-214ENST00000497556 ADAMTS8Q9UP79 889 aa17.83■□□□□ 0.44
ATP13A1-214ENST00000497556 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
ATP13A1-214ENST00000497556 PANK2Q9BZ23 570 aa17.82■□□□□ 0.44
ATP13A1-214ENST00000497556 RGS3P49796 1198 aa17.81■□□□□ 0.44
ATP13A1-214ENST00000497556 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
ATP13A1-214ENST00000497556 INSRP06213 1382 aa17.81■□□□□ 0.44
ATP13A1-214ENST00000497556 PLEKHH1Q9ULM0 1364 aa17.81■□□□□ 0.44
ATP13A1-214ENST00000497556 ALKQ9UM73 1620 aa17.81■□□□□ 0.44
ATP13A1-214ENST00000497556 ANTXR1Q9H6X2 564 aa17.8■□□□□ 0.44
ATP13A1-214ENST00000497556 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
ATP13A1-214ENST00000497556 SLKQ9H2G2 1235 aaPredicted RBP17.8■□□□□ 0.44
ATP13A1-214ENST00000497556 ARXQ96QS3 562 aa17.79■□□□□ 0.44
ATP13A1-214ENST00000497556 BECN1Q14457 450 aa17.79■□□□□ 0.44
ATP13A1-214ENST00000497556 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
ATP13A1-214ENST00000497556 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
ATP13A1-214ENST00000497556 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
ATP13A1-214ENST00000497556 NRXN3Q9Y4C0 1643 aa17.76■□□□□ 0.43
ATP13A1-214ENST00000497556 DUSP27Q5VZP5 1158 aa17.75■□□□□ 0.43
ATP13A1-214ENST00000497556 STK26Q9P289 416 aa17.74■□□□□ 0.43
ATP13A1-214ENST00000497556 YTHDC2Q9H6S0 1430 aaKnown RBP17.74■□□□□ 0.43
ATP13A1-214ENST00000497556 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
ATP13A1-214ENST00000497556 PTPRMP28827 1452 aa17.74■□□□□ 0.43
ATP13A1-214ENST00000497556 ESPNB1AK53 854 aa17.73■□□□□ 0.43
ATP13A1-214ENST00000497556 TPM2P07951 284 aa17.72■□□□□ 0.43
ATP13A1-214ENST00000497556 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
ATP13A1-214ENST00000497556 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
ATP13A1-214ENST00000497556 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
ATP13A1-214ENST00000497556 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
ATP13A1-214ENST00000497556 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
ATP13A1-214ENST00000497556 PPP2R1AP30153 589 aa17.71■□□□□ 0.43
ATP13A1-214ENST00000497556 MRE11P49959 708 aa17.71■□□□□ 0.43
ATP13A1-214ENST00000497556 CCDC146Q8IYE0 955 aa17.71■□□□□ 0.43
ATP13A1-214ENST00000497556 TMEM2Q9UHN6 1383 aa17.71■□□□□ 0.43
ATP13A1-214ENST00000497556 CALD1Q05682 793 aaKnown RBP17.71■□□□□ 0.43
ATP13A1-214ENST00000497556 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.42
ATP13A1-214ENST00000497556 SEC24BO95487 1268 aa17.7■□□□□ 0.42
ATP13A1-214ENST00000497556 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
ATP13A1-214ENST00000497556 GZF1Q9H116 711 aaPredicted RBP17.69■□□□□ 0.42
ATP13A1-214ENST00000497556 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
ATP13A1-214ENST00000497556 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
ATP13A1-214ENST00000497556 MCM4P33991 863 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms