RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 TBX22Q9Y458 520 aa27.28■■□□□ 1.96
LINC01558-202ENST00000495520 LRPPRCP42704 1394 aaKnown RBP27.27■■□□□ 1.96
LINC01558-202ENST00000495520 AMER1Q5JTC6 1135 aaPredicted RBP27.26■■□□□ 1.95
LINC01558-202ENST00000495520 PNISRQ8TF01 805 aaKnown RBP27.25■■□□□ 1.95
LINC01558-202ENST00000495520 KNSTRNQ9Y448 316 aa27.24■■□□□ 1.95
LINC01558-202ENST00000495520 CNGB1Q14028 1251 aaPredicted RBP27.24■■□□□ 1.95
LINC01558-202ENST00000495520 NLRP13Q86W25 1043 aa27.24■■□□□ 1.95
LINC01558-202ENST00000495520 FAM9BQ8IZU0 186 aa27.23■■□□□ 1.95
LINC01558-202ENST00000495520 DLC1Q96QB1 1528 aa27.23■■□□□ 1.95
LINC01558-202ENST00000495520 HNRNPUQ00839 825 aaKnown RBP eCLIP27.22■■□□□ 1.95
LINC01558-202ENST00000495520 TULP4Q9NRJ4 1543 aa27.22■■□□□ 1.95
LINC01558-202ENST00000495520 TMC1Q8TDI8 760 aa27.21■■□□□ 1.95
LINC01558-202ENST00000495520 EVC2Q86UK5 1308 aa27.21■■□□□ 1.95
LINC01558-202ENST00000495520 ABCC11Q96J66 1382 aa27.21■■□□□ 1.95
LINC01558-202ENST00000495520 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.94
LINC01558-202ENST00000495520 CC2D1BQ5T0F9 858 aaKnown RBP27.2■■□□□ 1.94
LINC01558-202ENST00000495520 PRAM1Q96QH2 718 aa27.2■■□□□ 1.94
LINC01558-202ENST00000495520 PTPRUQ92729 1446 aa27.2■■□□□ 1.94
LINC01558-202ENST00000495520 POGKQ9P215 609 aa27.19■■□□□ 1.94
LINC01558-202ENST00000495520 KNDC1Q76NI1 1749 aa27.18■■□□□ 1.94
LINC01558-202ENST00000495520 CARD14Q9BXL6 1004 aa27.17■■□□□ 1.94
LINC01558-202ENST00000495520 AMOTL2Q9Y2J4 779 aa27.17■■□□□ 1.94
LINC01558-202ENST00000495520 TECPR2O15040 1411 aa27.16■■□□□ 1.94
LINC01558-202ENST00000495520 PIK3R4Q99570 1358 aa27.15■■□□□ 1.94
LINC01558-202ENST00000495520 WAPLQ7Z5K2 1190 aa27.15■■□□□ 1.94
LINC01558-202ENST00000495520 CPS1P31327 1500 aa27.15■■□□□ 1.94
LINC01558-202ENST00000495520 PLEKHH1Q9ULM0 1364 aa27.14■■□□□ 1.94
LINC01558-202ENST00000495520 STRCQ7RTU9 1775 aa27.14■■□□□ 1.93
LINC01558-202ENST00000495520 SIRT1Q96EB6 747 aa27.13■■□□□ 1.93
LINC01558-202ENST00000495520 ROBO2Q9HCK4 1378 aa27.13■■□□□ 1.93
LINC01558-202ENST00000495520 ZBED9Q6R2W3 1325 aa27.11■■□□□ 1.93
LINC01558-202ENST00000495520 XRN1Q8IZH2 1706 aaKnown RBP27.11■■□□□ 1.93
LINC01558-202ENST00000495520 FAM135BQ49AJ0 1406 aa27.11■■□□□ 1.93
LINC01558-202ENST00000495520 SLC12A5Q9H2X9 1139 aa27.11■■□□□ 1.93
LINC01558-202ENST00000495520 NINLQ9Y2I6 1382 aa27.1■■□□□ 1.93
LINC01558-202ENST00000495520 MINK1Q8N4C8 1332 aaPredicted RBP27.09■■□□□ 1.93
LINC01558-202ENST00000495520 KCNA6P17658 529 aa27.09■■□□□ 1.93
LINC01558-202ENST00000495520 INSRP06213 1382 aa27.09■■□□□ 1.93
LINC01558-202ENST00000495520 CHD2O14647 1828 aaKnown RBP27.09■■□□□ 1.93
LINC01558-202ENST00000495520 PPP2R1AP30153 589 aa27.07■■□□□ 1.92
LINC01558-202ENST00000495520 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
LINC01558-202ENST00000495520 CABP2Q9NPB3 220 aa27.06■■□□□ 1.92
LINC01558-202ENST00000495520 ATAD2Q6PL18 1390 aa27.05■■□□□ 1.92
LINC01558-202ENST00000495520 ANKRD36BQ8N2N9 1353 aa27.05■■□□□ 1.92
LINC01558-202ENST00000495520 USP32Q8NFA0 1604 aa27.04■■□□□ 1.92
LINC01558-202ENST00000495520 NSD3Q9BZ95 1437 aa27.02■■□□□ 1.92
LINC01558-202ENST00000495520 NWD1Q149M9 1564 aa27■■□□□ 1.91
LINC01558-202ENST00000495520 SRPK2P78362 688 aaKnown RBP26.99■■□□□ 1.91
LINC01558-202ENST00000495520 CDK19Q9BWU1 502 aa26.99■■□□□ 1.91
LINC01558-202ENST00000495520 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.98■■□□□ 1.91
LINC01558-202ENST00000495520 AEBP2Q6ZN18 517 aaPredicted RBP26.98■■□□□ 1.91
LINC01558-202ENST00000495520 RBM33Q96EV2 1170 aaKnown RBP26.95■■□□□ 1.9
LINC01558-202ENST00000495520 NSD2O96028 1365 aa26.94■■□□□ 1.9
LINC01558-202ENST00000495520 DMRT2Q9Y5R5 561 aa26.94■■□□□ 1.9
LINC01558-202ENST00000495520 CD163L1Q9NR16 1453 aa26.94■■□□□ 1.9
LINC01558-202ENST00000495520 CGNL1Q0VF96 1302 aa26.93■■□□□ 1.9
LINC01558-202ENST00000495520 WASLO00401 505 aaPredicted RBP26.92■■□□□ 1.9
LINC01558-202ENST00000495520 A0A1W2PP64 1363 aa26.92■■□□□ 1.9
LINC01558-202ENST00000495520 NKTRP30414 1462 aaKnown RBP26.92■■□□□ 1.9
LINC01558-202ENST00000495520 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
LINC01558-202ENST00000495520 ADGRB2O60241 1585 aa26.92■■□□□ 1.9
LINC01558-202ENST00000495520 BLMP54132 1417 aaPredicted RBP26.92■■□□□ 1.9
LINC01558-202ENST00000495520 PROSER2Q86WR7 435 aaPredicted RBP26.91■■□□□ 1.9
LINC01558-202ENST00000495520 TERF2IPQ9NYB0 399 aa26.89■■□□□ 1.9
LINC01558-202ENST00000495520 ZNF335Q9H4Z2 1342 aaPredicted RBP26.87■■□□□ 1.89
LINC01558-202ENST00000495520 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
LINC01558-202ENST00000495520 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
LINC01558-202ENST00000495520 MORC1Q86VD1 984 aa26.86■■□□□ 1.89
LINC01558-202ENST00000495520 ATP7BP35670 1465 aa26.85■■□□□ 1.89
LINC01558-202ENST00000495520 POLR3AO14802 1390 aaPredicted RBP26.85■■□□□ 1.89
LINC01558-202ENST00000495520 SMG6Q86US8 1419 aaKnown RBP26.84■■□□□ 1.89
LINC01558-202ENST00000495520 CABP1Q9NZU7 370 aa26.84■■□□□ 1.89
LINC01558-202ENST00000495520 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
LINC01558-202ENST00000495520 NUTM2FA1L443 756 aa26.82■■□□□ 1.88
LINC01558-202ENST00000495520 HDGFL2Q7Z4V5 671 aaPredicted RBP26.82■■□□□ 1.88
LINC01558-202ENST00000495520 ADAMTS8Q9UP79 889 aa26.82■■□□□ 1.88
LINC01558-202ENST00000495520 TMEM94Q12767 1356 aa26.81■■□□□ 1.88
LINC01558-202ENST00000495520 SUPT16HQ9Y5B9 1047 aaKnown RBP26.81■■□□□ 1.88
LINC01558-202ENST00000495520 NUDT16Q96DE0 195 aaKnown RBP26.8■■□□□ 1.88
LINC01558-202ENST00000495520 CPSF1Q10570 1443 aaKnown RBP26.79■■□□□ 1.88
LINC01558-202ENST00000495520 CDC42BPGQ6DT37 1551 aa26.79■■□□□ 1.88
LINC01558-202ENST00000495520 PRR36Q9H6K5 1346 aa26.79■■□□□ 1.88
LINC01558-202ENST00000495520 WDR43Q15061 677 aaKnown RBP eCLIP26.78■■□□□ 1.88
LINC01558-202ENST00000495520 FYB1O15117 783 aa26.77■■□□□ 1.88
LINC01558-202ENST00000495520 PPIP5K1Q6PFW1 1433 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 FMN2Q9NZ56 1722 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 NUDCQ9Y266 331 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 CCDC61Q9Y6R9 512 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 PDE3BQ13370 1112 aa26.75■■□□□ 1.87
LINC01558-202ENST00000495520 LRRC7Q96NW7 1537 aa26.74■■□□□ 1.87
LINC01558-202ENST00000495520 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
LINC01558-202ENST00000495520 ANKRD26Q9UPS8 1709 aa26.73■■□□□ 1.87
LINC01558-202ENST00000495520 C19orf44Q9H6X5 657 aa26.73■■□□□ 1.87
LINC01558-202ENST00000495520 TOPAZ1Q8N9V7 1692 aa26.71■■□□□ 1.87
LINC01558-202ENST00000495520 ANKARQ7Z5J8 1434 aa26.7■■□□□ 1.86
LINC01558-202ENST00000495520 XIRP1Q702N8 1843 aaKnown RBP26.7■■□□□ 1.86
LINC01558-202ENST00000495520 NEFLP07196 543 aa26.7■■□□□ 1.86
LINC01558-202ENST00000495520 MTHFSP49914 203 aa26.7■■□□□ 1.86
LINC01558-202ENST00000495520 RGPD8O14715 1765 aaPredicted RBP26.69■■□□□ 1.86
LINC01558-202ENST00000495520 EDC4Q6P2E9 1401 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms