RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 TBX22Q9Y458 520 aa27.28■■□□□ 1.96
LINC01558-202ENST00000495520 LRPPRCP42704 1394 aaKnown RBP27.27■■□□□ 1.96
LINC01558-202ENST00000495520 AMER1Q5JTC6 1135 aaPredicted RBP27.26■■□□□ 1.95
LINC01558-202ENST00000495520 PNISRQ8TF01 805 aaKnown RBP27.25■■□□□ 1.95
LINC01558-202ENST00000495520 KNSTRNQ9Y448 316 aa27.24■■□□□ 1.95
LINC01558-202ENST00000495520 CNGB1Q14028 1251 aaPredicted RBP27.24■■□□□ 1.95
LINC01558-202ENST00000495520 NLRP13Q86W25 1043 aa27.24■■□□□ 1.95
LINC01558-202ENST00000495520 FAM9BQ8IZU0 186 aa27.23■■□□□ 1.95
LINC01558-202ENST00000495520 DLC1Q96QB1 1528 aa27.23■■□□□ 1.95
LINC01558-202ENST00000495520 HNRNPUQ00839 825 aaKnown RBP eCLIP27.22■■□□□ 1.95
LINC01558-202ENST00000495520 TULP4Q9NRJ4 1543 aa27.22■■□□□ 1.95
LINC01558-202ENST00000495520 TMC1Q8TDI8 760 aa27.21■■□□□ 1.95
LINC01558-202ENST00000495520 EVC2Q86UK5 1308 aa27.21■■□□□ 1.95
LINC01558-202ENST00000495520 ABCC11Q96J66 1382 aa27.21■■□□□ 1.95
LINC01558-202ENST00000495520 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.94
LINC01558-202ENST00000495520 CC2D1BQ5T0F9 858 aaKnown RBP27.2■■□□□ 1.94
LINC01558-202ENST00000495520 PRAM1Q96QH2 718 aa27.2■■□□□ 1.94
LINC01558-202ENST00000495520 PTPRUQ92729 1446 aa27.2■■□□□ 1.94
LINC01558-202ENST00000495520 POGKQ9P215 609 aa27.19■■□□□ 1.94
LINC01558-202ENST00000495520 KNDC1Q76NI1 1749 aa27.18■■□□□ 1.94
LINC01558-202ENST00000495520 CARD14Q9BXL6 1004 aa27.17■■□□□ 1.94
LINC01558-202ENST00000495520 AMOTL2Q9Y2J4 779 aa27.17■■□□□ 1.94
LINC01558-202ENST00000495520 TECPR2O15040 1411 aa27.16■■□□□ 1.94
LINC01558-202ENST00000495520 PIK3R4Q99570 1358 aa27.15■■□□□ 1.94
LINC01558-202ENST00000495520 WAPLQ7Z5K2 1190 aa27.15■■□□□ 1.94
LINC01558-202ENST00000495520 CPS1P31327 1500 aa27.15■■□□□ 1.94
LINC01558-202ENST00000495520 PLEKHH1Q9ULM0 1364 aa27.14■■□□□ 1.94
LINC01558-202ENST00000495520 STRCQ7RTU9 1775 aa27.14■■□□□ 1.93
LINC01558-202ENST00000495520 SIRT1Q96EB6 747 aa27.13■■□□□ 1.93
LINC01558-202ENST00000495520 ROBO2Q9HCK4 1378 aa27.13■■□□□ 1.93
LINC01558-202ENST00000495520 ZBED9Q6R2W3 1325 aa27.11■■□□□ 1.93
LINC01558-202ENST00000495520 XRN1Q8IZH2 1706 aaKnown RBP27.11■■□□□ 1.93
LINC01558-202ENST00000495520 FAM135BQ49AJ0 1406 aa27.11■■□□□ 1.93
LINC01558-202ENST00000495520 SLC12A5Q9H2X9 1139 aa27.11■■□□□ 1.93
LINC01558-202ENST00000495520 NINLQ9Y2I6 1382 aa27.1■■□□□ 1.93
LINC01558-202ENST00000495520 MINK1Q8N4C8 1332 aaPredicted RBP27.09■■□□□ 1.93
LINC01558-202ENST00000495520 KCNA6P17658 529 aa27.09■■□□□ 1.93
LINC01558-202ENST00000495520 INSRP06213 1382 aa27.09■■□□□ 1.93
LINC01558-202ENST00000495520 CHD2O14647 1828 aaKnown RBP27.09■■□□□ 1.93
LINC01558-202ENST00000495520 PPP2R1AP30153 589 aa27.07■■□□□ 1.92
LINC01558-202ENST00000495520 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
LINC01558-202ENST00000495520 CABP2Q9NPB3 220 aa27.06■■□□□ 1.92
LINC01558-202ENST00000495520 ATAD2Q6PL18 1390 aa27.05■■□□□ 1.92
LINC01558-202ENST00000495520 ANKRD36BQ8N2N9 1353 aa27.05■■□□□ 1.92
LINC01558-202ENST00000495520 USP32Q8NFA0 1604 aa27.04■■□□□ 1.92
LINC01558-202ENST00000495520 NSD3Q9BZ95 1437 aa27.02■■□□□ 1.92
LINC01558-202ENST00000495520 NWD1Q149M9 1564 aa27■■□□□ 1.91
LINC01558-202ENST00000495520 SRPK2P78362 688 aaKnown RBP26.99■■□□□ 1.91
LINC01558-202ENST00000495520 CDK19Q9BWU1 502 aa26.99■■□□□ 1.91
LINC01558-202ENST00000495520 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.98■■□□□ 1.91
LINC01558-202ENST00000495520 AEBP2Q6ZN18 517 aaPredicted RBP26.98■■□□□ 1.91
LINC01558-202ENST00000495520 RBM33Q96EV2 1170 aaKnown RBP26.95■■□□□ 1.9
LINC01558-202ENST00000495520 NSD2O96028 1365 aa26.94■■□□□ 1.9
LINC01558-202ENST00000495520 DMRT2Q9Y5R5 561 aa26.94■■□□□ 1.9
LINC01558-202ENST00000495520 CD163L1Q9NR16 1453 aa26.94■■□□□ 1.9
LINC01558-202ENST00000495520 CGNL1Q0VF96 1302 aa26.93■■□□□ 1.9
LINC01558-202ENST00000495520 WASLO00401 505 aaPredicted RBP26.92■■□□□ 1.9
LINC01558-202ENST00000495520 A0A1W2PP64 1363 aa26.92■■□□□ 1.9
LINC01558-202ENST00000495520 NKTRP30414 1462 aaKnown RBP26.92■■□□□ 1.9
LINC01558-202ENST00000495520 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
LINC01558-202ENST00000495520 ADGRB2O60241 1585 aa26.92■■□□□ 1.9
LINC01558-202ENST00000495520 BLMP54132 1417 aaPredicted RBP26.92■■□□□ 1.9
LINC01558-202ENST00000495520 PROSER2Q86WR7 435 aaPredicted RBP26.91■■□□□ 1.9
LINC01558-202ENST00000495520 TERF2IPQ9NYB0 399 aa26.89■■□□□ 1.9
LINC01558-202ENST00000495520 ZNF335Q9H4Z2 1342 aaPredicted RBP26.87■■□□□ 1.89
LINC01558-202ENST00000495520 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
LINC01558-202ENST00000495520 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
LINC01558-202ENST00000495520 MORC1Q86VD1 984 aa26.86■■□□□ 1.89
LINC01558-202ENST00000495520 ATP7BP35670 1465 aa26.85■■□□□ 1.89
LINC01558-202ENST00000495520 POLR3AO14802 1390 aaPredicted RBP26.85■■□□□ 1.89
LINC01558-202ENST00000495520 SMG6Q86US8 1419 aaKnown RBP26.84■■□□□ 1.89
LINC01558-202ENST00000495520 CABP1Q9NZU7 370 aa26.84■■□□□ 1.89
LINC01558-202ENST00000495520 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
LINC01558-202ENST00000495520 NUTM2FA1L443 756 aa26.82■■□□□ 1.88
LINC01558-202ENST00000495520 HDGFL2Q7Z4V5 671 aaPredicted RBP26.82■■□□□ 1.88
LINC01558-202ENST00000495520 ADAMTS8Q9UP79 889 aa26.82■■□□□ 1.88
LINC01558-202ENST00000495520 TMEM94Q12767 1356 aa26.81■■□□□ 1.88
LINC01558-202ENST00000495520 SUPT16HQ9Y5B9 1047 aaKnown RBP26.81■■□□□ 1.88
LINC01558-202ENST00000495520 NUDT16Q96DE0 195 aaKnown RBP26.8■■□□□ 1.88
LINC01558-202ENST00000495520 CPSF1Q10570 1443 aaKnown RBP26.79■■□□□ 1.88
LINC01558-202ENST00000495520 CDC42BPGQ6DT37 1551 aa26.79■■□□□ 1.88
LINC01558-202ENST00000495520 PRR36Q9H6K5 1346 aa26.79■■□□□ 1.88
LINC01558-202ENST00000495520 WDR43Q15061 677 aaKnown RBP eCLIP26.78■■□□□ 1.88
LINC01558-202ENST00000495520 FYB1O15117 783 aa26.77■■□□□ 1.88
LINC01558-202ENST00000495520 PPIP5K1Q6PFW1 1433 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 FMN2Q9NZ56 1722 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 NUDCQ9Y266 331 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 CCDC61Q9Y6R9 512 aa26.76■■□□□ 1.87
LINC01558-202ENST00000495520 PDE3BQ13370 1112 aa26.75■■□□□ 1.87
LINC01558-202ENST00000495520 LRRC7Q96NW7 1537 aa26.74■■□□□ 1.87
LINC01558-202ENST00000495520 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
LINC01558-202ENST00000495520 ANKRD26Q9UPS8 1709 aa26.73■■□□□ 1.87
LINC01558-202ENST00000495520 C19orf44Q9H6X5 657 aa26.73■■□□□ 1.87
LINC01558-202ENST00000495520 TOPAZ1Q8N9V7 1692 aa26.71■■□□□ 1.87
LINC01558-202ENST00000495520 ANKARQ7Z5J8 1434 aa26.7■■□□□ 1.86
LINC01558-202ENST00000495520 XIRP1Q702N8 1843 aaKnown RBP26.7■■□□□ 1.86
LINC01558-202ENST00000495520 NEFLP07196 543 aa26.7■■□□□ 1.86
LINC01558-202ENST00000495520 MTHFSP49914 203 aa26.7■■□□□ 1.86
LINC01558-202ENST00000495520 RGPD8O14715 1765 aaPredicted RBP26.69■■□□□ 1.86
LINC01558-202ENST00000495520 EDC4Q6P2E9 1401 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms