RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 CFAP70Q5T0N1 1121 aa22.45■■□□□ 1.18
BRD9-212ENST00000495265 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
BRD9-212ENST00000495265 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.18
BRD9-212ENST00000495265 UHRF1BP1LA0JNW5 1464 aa22.44■■□□□ 1.18
BRD9-212ENST00000495265 TRPM2O94759 1503 aa22.44■■□□□ 1.18
BRD9-212ENST00000495265 CLTCL1P53675 1640 aa22.44■■□□□ 1.18
BRD9-212ENST00000495265 SHPRHQ149N8 1683 aa22.42■■□□□ 1.18
BRD9-212ENST00000495265 STAC3Q96MF2 364 aa22.42■■□□□ 1.18
BRD9-212ENST00000495265 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
BRD9-212ENST00000495265 MRE11P49959 708 aa22.41■■□□□ 1.18
BRD9-212ENST00000495265 MVPQ14764 893 aaKnown RBP22.41■■□□□ 1.18
BRD9-212ENST00000495265 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
BRD9-212ENST00000495265 MORC1Q86VD1 984 aa22.4■■□□□ 1.18
BRD9-212ENST00000495265 WDR63Q8IWG1 891 aa22.4■■□□□ 1.18
BRD9-212ENST00000495265 PTPRTO14522 1441 aa22.39■■□□□ 1.17
BRD9-212ENST00000495265 ZCCHC11Q5TAX3 1644 aaKnown RBP22.39■■□□□ 1.17
BRD9-212ENST00000495265 GRPEL1Q9HAV7 217 aa22.38■■□□□ 1.17
BRD9-212ENST00000495265 ZNF692Q9BU19 519 aaPredicted RBP22.38■■□□□ 1.17
BRD9-212ENST00000495265 TRAPPC8Q9Y2L5 1435 aa22.37■■□□□ 1.17
BRD9-212ENST00000495265 ADGRF5Q8IZF2 1346 aa22.37■■□□□ 1.17
BRD9-212ENST00000495265 NSD3Q9BZ95 1437 aa22.36■■□□□ 1.17
BRD9-212ENST00000495265 FTSJ3Q8IY81 847 aaKnown RBP22.36■■□□□ 1.17
BRD9-212ENST00000495265 HSCBQ8IWL3 235 aa22.35■■□□□ 1.17
BRD9-212ENST00000495265 MYH16Q9H6N6 1097 aa22.35■■□□□ 1.17
BRD9-212ENST00000495265 HSP90AA1P07900 732 aaKnown RBP22.35■■□□□ 1.17
BRD9-212ENST00000495265 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
BRD9-212ENST00000495265 DZIP1LQ8IYY4 767 aaKnown RBP22.35■■□□□ 1.17
BRD9-212ENST00000495265 ERBB4Q15303 1308 aa22.35■■□□□ 1.17
BRD9-212ENST00000495265 KIAA1210Q9ULL0 1709 aa22.34■■□□□ 1.17
BRD9-212ENST00000495265 DDX11L8A8MPP1 907 aa22.34■■□□□ 1.17
BRD9-212ENST00000495265 SLC24A1O60721 1099 aa22.33■■□□□ 1.16
BRD9-212ENST00000495265 MTHFSP49914 203 aa22.33■■□□□ 1.16
BRD9-212ENST00000495265 HSP90AA2PQ14568 343 aaPredicted RBP22.33■■□□□ 1.16
BRD9-212ENST00000495265 GLIPR1L2Q4G1C9 344 aa22.33■■□□□ 1.16
BRD9-212ENST00000495265 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
BRD9-212ENST00000495265 ABCA6Q8N139 1617 aa22.32■■□□□ 1.16
BRD9-212ENST00000495265 ESPNB1AK53 854 aa22.32■■□□□ 1.16
BRD9-212ENST00000495265 SLC12A5Q9H2X9 1139 aa22.32■■□□□ 1.16
BRD9-212ENST00000495265 CCDC27Q2M243 656 aa22.31■■□□□ 1.16
BRD9-212ENST00000495265 EFCAB2Q5VUJ9 269 aa22.31■■□□□ 1.16
BRD9-212ENST00000495265 TSR2Q969E8 191 aaKnown RBP22.3■■□□□ 1.16
BRD9-212ENST00000495265 DDIT3P35638 169 aa22.3■■□□□ 1.16
BRD9-212ENST00000495265 KANK1Q14678 1352 aa22.29■■□□□ 1.16
BRD9-212ENST00000495265 GAS2L3Q86XJ1 694 aa22.29■■□□□ 1.16
BRD9-212ENST00000495265 SPAG9O60271 1321 aaKnown RBP22.29■■□□□ 1.16
BRD9-212ENST00000495265 UGGT1Q9NYU2 1555 aa22.29■■□□□ 1.16
BRD9-212ENST00000495265 PLCH2O75038 1416 aa22.29■■□□□ 1.16
BRD9-212ENST00000495265 VSIG10Q8N0Z9 540 aa22.29■■□□□ 1.16
BRD9-212ENST00000495265 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
BRD9-212ENST00000495265 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
BRD9-212ENST00000495265 HDAC1Q13547 482 aaPredicted RBP22.28■■□□□ 1.16
BRD9-212ENST00000495265 ITPRIPQ8IWB1 547 aa22.28■■□□□ 1.16
BRD9-212ENST00000495265 TNPO1Q92973 898 aaKnown RBP22.28■■□□□ 1.16
BRD9-212ENST00000495265 PKNOX2Q96KN3 472 aa22.28■■□□□ 1.16
BRD9-212ENST00000495265 SMC4Q9NTJ3 1288 aa22.28■■□□□ 1.16
BRD9-212ENST00000495265 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
BRD9-212ENST00000495265 TRIM27P14373 513 aa22.28■■□□□ 1.16
BRD9-212ENST00000495265 RRP9O43818 475 aaKnown RBP22.27■■□□□ 1.16
BRD9-212ENST00000495265 ABCC1P33527 1531 aa22.27■■□□□ 1.16
BRD9-212ENST00000495265 ZNF518AQ6AHZ1 1483 aa22.26■■□□□ 1.15
BRD9-212ENST00000495265 U2AF1L5P0DN76 240 aaPredicted RBP22.26■■□□□ 1.15
BRD9-212ENST00000495265 U2AF1Q01081 240 aaKnown RBP eCLIP22.26■■□□□ 1.15
BRD9-212ENST00000495265 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
BRD9-212ENST00000495265 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
BRD9-212ENST00000495265 SMC5Q8IY18 1101 aa22.24■■□□□ 1.15
BRD9-212ENST00000495265 ISY1Q9ULR0 285 aaKnown RBP22.24■■□□□ 1.15
BRD9-212ENST00000495265 TET3O43151 1660 aa22.24■■□□□ 1.15
BRD9-212ENST00000495265 MYOM2P54296 1465 aa22.24■■□□□ 1.15
BRD9-212ENST00000495265 SSH1Q8WYL5 1049 aa22.23■■□□□ 1.15
BRD9-212ENST00000495265 TRIM44Q96DX7 344 aaPredicted RBP22.23■■□□□ 1.15
BRD9-212ENST00000495265 TRAK1Q9UPV9 953 aa22.23■■□□□ 1.15
BRD9-212ENST00000495265 RBM25P49756 843 aaKnown RBP22.23■■□□□ 1.15
BRD9-212ENST00000495265 DDX19BQ9UMR2 479 aa22.23■■□□□ 1.15
BRD9-212ENST00000495265 SBNO2Q9Y2G9 1366 aa22.22■■□□□ 1.15
BRD9-212ENST00000495265 SNX21Q969T3 373 aa22.22■■□□□ 1.15
BRD9-212ENST00000495265 ZMYND15Q9H091 742 aa22.22■■□□□ 1.15
BRD9-212ENST00000495265 HSP90AB1P08238 724 aaKnown RBP22.21■■□□□ 1.15
BRD9-212ENST00000495265 FOXD4L1Q9NU39 408 aa22.21■■□□□ 1.15
BRD9-212ENST00000495265 ATF7IPQ6VMQ6 1270 aa22.21■■□□□ 1.15
BRD9-212ENST00000495265 TMEM57Q8N5G2 664 aa22.2■■□□□ 1.14
BRD9-212ENST00000495265 NOB1Q9ULX3 412 aaKnown RBP22.2■■□□□ 1.14
BRD9-212ENST00000495265 MYO3AQ8NEV4 1616 aa22.2■■□□□ 1.14
BRD9-212ENST00000495265 LNPKQ9C0E8 428 aa22.2■■□□□ 1.14
BRD9-212ENST00000495265 DEPDC5O75140 1603 aa22.2■■□□□ 1.14
BRD9-212ENST00000495265 KIF3BO15066 747 aa22.19■■□□□ 1.14
BRD9-212ENST00000495265 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
BRD9-212ENST00000495265 RAB3GAP1Q15042 981 aa22.19■■□□□ 1.14
BRD9-212ENST00000495265 GBP4Q96PP9 640 aa22.19■■□□□ 1.14
BRD9-212ENST00000495265 CD2BP2O95400 341 aaKnown RBP22.17■■□□□ 1.14
BRD9-212ENST00000495265 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
BRD9-212ENST00000495265 ZBTB40Q9NUA8 1239 aa22.17■■□□□ 1.14
BRD9-212ENST00000495265 CIZ1Q9ULV3 898 aaPredicted RBP22.17■■□□□ 1.14
BRD9-212ENST00000495265 NUCB1Q02818 461 aa22.16■■□□□ 1.14
BRD9-212ENST00000495265 KIF2CQ99661 725 aa22.16■■□□□ 1.14
BRD9-212ENST00000495265 ADGRB2O60241 1585 aa22.15■■□□□ 1.14
BRD9-212ENST00000495265 NEURL4Q96JN8 1562 aa22.15■■□□□ 1.14
BRD9-212ENST00000495265 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.14
BRD9-212ENST00000495265 SKOR2Q2VWA4 1001 aaPredicted RBP22.14■■□□□ 1.13
BRD9-212ENST00000495265 TRIM35Q9UPQ4 493 aa22.14■■□□□ 1.13
BRD9-212ENST00000495265 NOS1P29475 1434 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms