RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 KIF1BO60333 1816 aa12.78□□□□□ -0.36
TSC1-207ENST00000493467 EFCAB6Q5THR3 1501 aa12.78□□□□□ -0.36
TSC1-207ENST00000493467 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
TSC1-207ENST00000493467 FANCAO15360 1455 aa12.77□□□□□ -0.36
TSC1-207ENST00000493467 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.36
TSC1-207ENST00000493467 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.36
TSC1-207ENST00000493467 LMTK2Q8IWU2 1503 aa12.77□□□□□ -0.36
TSC1-207ENST00000493467 ZNF521Q96K83 1311 aa12.77□□□□□ -0.37
TSC1-207ENST00000493467 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
TSC1-207ENST00000493467 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.37
TSC1-207ENST00000493467 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
TSC1-207ENST00000493467 CCDC9Q9Y3X0 531 aaKnown RBP12.76□□□□□ -0.37
TSC1-207ENST00000493467 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
TSC1-207ENST00000493467 MROH2AA6NES4 1674 aa12.75□□□□□ -0.37
TSC1-207ENST00000493467 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
TSC1-207ENST00000493467 ERVK-7P63135 1459 aa12.75□□□□□ -0.37
TSC1-207ENST00000493467 PLEKHH1Q9ULM0 1364 aa12.75□□□□□ -0.37
TSC1-207ENST00000493467 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
TSC1-207ENST00000493467 SETBP1Q9Y6X0 1596 aa12.74□□□□□ -0.37
TSC1-207ENST00000493467 PPRC1Q5VV67 1664 aaKnown RBP12.74□□□□□ -0.37
TSC1-207ENST00000493467 ADGRL1O94910 1474 aa12.74□□□□□ -0.37
TSC1-207ENST00000493467 AFAP1Q8N556 730 aa12.74□□□□□ -0.37
TSC1-207ENST00000493467 BACH2Q9BYV9 841 aa12.74□□□□□ -0.37
TSC1-207ENST00000493467 SBNO2Q9Y2G9 1366 aa12.74□□□□□ -0.37
TSC1-207ENST00000493467 PDE4AP27815 886 aa12.73□□□□□ -0.37
TSC1-207ENST00000493467 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
TSC1-207ENST00000493467 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
TSC1-207ENST00000493467 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
TSC1-207ENST00000493467 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
TSC1-207ENST00000493467 KIDINS220Q9ULH0 1771 aa12.73□□□□□ -0.37
TSC1-207ENST00000493467 ADGRB3O60242 1522 aa12.73□□□□□ -0.37
TSC1-207ENST00000493467 IL27Q8NEV9 243 aa12.73□□□□□ -0.37
TSC1-207ENST00000493467 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
TSC1-207ENST00000493467 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
TSC1-207ENST00000493467 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.37
TSC1-207ENST00000493467 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
TSC1-207ENST00000493467 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
TSC1-207ENST00000493467 PLIN1O60240 522 aa12.7□□□□□ -0.38
TSC1-207ENST00000493467 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
TSC1-207ENST00000493467 SEMA3EO15041 775 aa12.69□□□□□ -0.38
TSC1-207ENST00000493467 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
TSC1-207ENST00000493467 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
TSC1-207ENST00000493467 USP32Q8NFA0 1604 aa12.69□□□□□ -0.38
TSC1-207ENST00000493467 ZMYND10O75800 440 aa12.69□□□□□ -0.38
TSC1-207ENST00000493467 DEKP35659 375 aaKnown RBP12.69□□□□□ -0.38
TSC1-207ENST00000493467 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
TSC1-207ENST00000493467 PPLO60437 1756 aa12.69□□□□□ -0.38
TSC1-207ENST00000493467 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
TSC1-207ENST00000493467 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
TSC1-207ENST00000493467 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
TSC1-207ENST00000493467 APBB1O00213 710 aa12.68□□□□□ -0.38
TSC1-207ENST00000493467 SLFN5Q08AF3 891 aa12.68□□□□□ -0.38
TSC1-207ENST00000493467 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
TSC1-207ENST00000493467 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
TSC1-207ENST00000493467 ZNF518AQ6AHZ1 1483 aa12.67□□□□□ -0.38
TSC1-207ENST00000493467 KIF3BO15066 747 aa12.67□□□□□ -0.38
TSC1-207ENST00000493467 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
TSC1-207ENST00000493467 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
TSC1-207ENST00000493467 HECW2Q9P2P5 1572 aa12.66□□□□□ -0.38
TSC1-207ENST00000493467 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
TSC1-207ENST00000493467 C20orf194Q5TEA3 1177 aa12.65□□□□□ -0.38
TSC1-207ENST00000493467 POLR3AO14802 1390 aaPredicted RBP12.65□□□□□ -0.38
TSC1-207ENST00000493467 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.38
TSC1-207ENST00000493467 ASXL2Q76L83 1435 aa12.65□□□□□ -0.38
TSC1-207ENST00000493467 ADGRB1O14514 1584 aa12.65□□□□□ -0.39
TSC1-207ENST00000493467 FRMPD1Q5SYB0 1578 aa12.65□□□□□ -0.39
TSC1-207ENST00000493467 GSE1Q14687 1217 aa12.64□□□□□ -0.39
TSC1-207ENST00000493467 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
TSC1-207ENST00000493467 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
TSC1-207ENST00000493467 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
TSC1-207ENST00000493467 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
TSC1-207ENST00000493467 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
TSC1-207ENST00000493467 DDRGK1Q96HY6 314 aa12.63□□□□□ -0.39
TSC1-207ENST00000493467 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
TSC1-207ENST00000493467 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
TSC1-207ENST00000493467 NOS1P29475 1434 aa12.62□□□□□ -0.39
TSC1-207ENST00000493467 MLH3Q9UHC1 1453 aa12.62□□□□□ -0.39
TSC1-207ENST00000493467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
TSC1-207ENST00000493467 E9PSI1 815 aa12.62□□□□□ -0.39
TSC1-207ENST00000493467 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
TSC1-207ENST00000493467 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
TSC1-207ENST00000493467 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
TSC1-207ENST00000493467 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
TSC1-207ENST00000493467 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
TSC1-207ENST00000493467 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
TSC1-207ENST00000493467 NPATQ14207 1427 aa12.6□□□□□ -0.39
TSC1-207ENST00000493467 TESPA1A2RU30 521 aaPredicted RBP12.6□□□□□ -0.39
TSC1-207ENST00000493467 RYDENQ9NUL5 291 aaKnown RBP12.6□□□□□ -0.39
TSC1-207ENST00000493467 CENPJQ9HC77 1338 aaPredicted RBP12.6□□□□□ -0.39
TSC1-207ENST00000493467 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
TSC1-207ENST00000493467 ABCC3O15438 1527 aa12.59□□□□□ -0.39
TSC1-207ENST00000493467 APAF1O14727 1248 aa12.59□□□□□ -0.39
TSC1-207ENST00000493467 PPM1GO15355 546 aaPredicted RBP12.58□□□□□ -0.39
TSC1-207ENST00000493467 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.39
TSC1-207ENST00000493467 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.39
TSC1-207ENST00000493467 ARHGEF28Q8N1W1 1705 aaKnown RBP12.58□□□□□ -0.4
TSC1-207ENST00000493467 NSD3Q9BZ95 1437 aa12.58□□□□□ -0.4
TSC1-207ENST00000493467 GLI2P10070 1586 aa12.58□□□□□ -0.4
TSC1-207ENST00000493467 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
TSC1-207ENST00000493467 NUBP1P53384 320 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms