RNA–Protein interactions for RNA: ENST00000492013.1

RTKN-210, Transcript of rhotekin, humanhuman

TSL 2

Gene RTKN, Length 853 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-210ENST00000492013 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
RTKN-210ENST00000492013 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
RTKN-210ENST00000492013 SIRT1Q96EB6 747 aa17.12■□□□□ 0.33
RTKN-210ENST00000492013 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
RTKN-210ENST00000492013 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
RTKN-210ENST00000492013 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
RTKN-210ENST00000492013 XRN1Q8IZH2 1706 aaKnown RBP17.11■□□□□ 0.33
RTKN-210ENST00000492013 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
RTKN-210ENST00000492013 ATAD2Q6PL18 1390 aa17.11■□□□□ 0.33
RTKN-210ENST00000492013 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTKN-210ENST00000492013 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
RTKN-210ENST00000492013 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
RTKN-210ENST00000492013 TBX22Q9Y458 520 aa17.08■□□□□ 0.32
RTKN-210ENST00000492013 CHD2O14647 1828 aaKnown RBP17.07■□□□□ 0.32
RTKN-210ENST00000492013 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
RTKN-210ENST00000492013 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
RTKN-210ENST00000492013 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
RTKN-210ENST00000492013 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
RTKN-210ENST00000492013 PIK3R4Q99570 1358 aa17.06■□□□□ 0.32
RTKN-210ENST00000492013 PLEKHH1Q9ULM0 1364 aa17.06■□□□□ 0.32
RTKN-210ENST00000492013 ITSN1Q15811 1721 aa17.05■□□□□ 0.32
RTKN-210ENST00000492013 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
RTKN-210ENST00000492013 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
RTKN-210ENST00000492013 CCDC184Q52MB2 194 aa17.05■□□□□ 0.32
RTKN-210ENST00000492013 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
RTKN-210ENST00000492013 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
RTKN-210ENST00000492013 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
RTKN-210ENST00000492013 PTPRUQ92729 1446 aa17.04■□□□□ 0.32
RTKN-210ENST00000492013 NLRP13Q86W25 1043 aa17.04■□□□□ 0.32
RTKN-210ENST00000492013 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
RTKN-210ENST00000492013 TMC1Q8TDI8 760 aa17.04■□□□□ 0.32
RTKN-210ENST00000492013 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
RTKN-210ENST00000492013 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
RTKN-210ENST00000492013 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
RTKN-210ENST00000492013 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
RTKN-210ENST00000492013 AKAP12Q02952 1782 aa17.02■□□□□ 0.32
RTKN-210ENST00000492013 TOPAZ1Q8N9V7 1692 aa17.02■□□□□ 0.32
RTKN-210ENST00000492013 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.32
RTKN-210ENST00000492013 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
RTKN-210ENST00000492013 ATP7BP35670 1465 aa17.01■□□□□ 0.31
RTKN-210ENST00000492013 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
RTKN-210ENST00000492013 MON2Q7Z3U7 1717 aa17■□□□□ 0.31
RTKN-210ENST00000492013 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
RTKN-210ENST00000492013 NSD2O96028 1365 aa17■□□□□ 0.31
RTKN-210ENST00000492013 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
RTKN-210ENST00000492013 CDC42BPGQ6DT37 1551 aa16.98■□□□□ 0.31
RTKN-210ENST00000492013 WASLO00401 505 aaPredicted RBP16.98■□□□□ 0.31
RTKN-210ENST00000492013 FAM9BQ8IZU0 186 aa16.98■□□□□ 0.31
RTKN-210ENST00000492013 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
RTKN-210ENST00000492013 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
RTKN-210ENST00000492013 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
RTKN-210ENST00000492013 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
RTKN-210ENST00000492013 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
RTKN-210ENST00000492013 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
RTKN-210ENST00000492013 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
RTKN-210ENST00000492013 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
RTKN-210ENST00000492013 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
RTKN-210ENST00000492013 NALCNQ8IZF0 1738 aa16.94■□□□□ 0.3
RTKN-210ENST00000492013 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
RTKN-210ENST00000492013 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
RTKN-210ENST00000492013 PPIP5K1Q6PFW1 1433 aa16.94■□□□□ 0.3
RTKN-210ENST00000492013 INSRP06213 1382 aa16.93■□□□□ 0.3
RTKN-210ENST00000492013 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
RTKN-210ENST00000492013 NRKQ7Z2Y5 1582 aa16.9■□□□□ 0.3
RTKN-210ENST00000492013 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
RTKN-210ENST00000492013 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
RTKN-210ENST00000492013 CABP1Q9NZU7 370 aa16.9■□□□□ 0.3
RTKN-210ENST00000492013 EDC4Q6P2E9 1401 aaKnown RBP16.89■□□□□ 0.29
RTKN-210ENST00000492013 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
RTKN-210ENST00000492013 CCDC61Q9Y6R9 512 aa16.89■□□□□ 0.29
RTKN-210ENST00000492013 KCNA6P17658 529 aa16.88■□□□□ 0.29
RTKN-210ENST00000492013 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
RTKN-210ENST00000492013 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
RTKN-210ENST00000492013 SHPRHQ149N8 1683 aa16.87■□□□□ 0.29
RTKN-210ENST00000492013 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
RTKN-210ENST00000492013 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
RTKN-210ENST00000492013 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
RTKN-210ENST00000492013 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
RTKN-210ENST00000492013 POLR3AO14802 1390 aaPredicted RBP16.85■□□□□ 0.29
RTKN-210ENST00000492013 KDM4FA0A1W2PPD8 638 aa16.84■□□□□ 0.29
RTKN-210ENST00000492013 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
RTKN-210ENST00000492013 LMTK3Q96Q04 1460 aa16.83■□□□□ 0.28
RTKN-210ENST00000492013 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
RTKN-210ENST00000492013 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
RTKN-210ENST00000492013 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
RTKN-210ENST00000492013 STRCQ7RTU9 1775 aa16.82■□□□□ 0.28
RTKN-210ENST00000492013 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
RTKN-210ENST00000492013 FYB1O15117 783 aa16.81■□□□□ 0.28
RTKN-210ENST00000492013 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
RTKN-210ENST00000492013 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
RTKN-210ENST00000492013 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
RTKN-210ENST00000492013 USP6P35125 1406 aa16.79■□□□□ 0.28
RTKN-210ENST00000492013 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
RTKN-210ENST00000492013 ACEP12821 1306 aa16.77■□□□□ 0.28
RTKN-210ENST00000492013 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
RTKN-210ENST00000492013 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
RTKN-210ENST00000492013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
RTKN-210ENST00000492013 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
RTKN-210ENST00000492013 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
RTKN-210ENST00000492013 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms