RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
PRPF4B-208ENST00000490653 RNF17Q9BXT8 1623 aaKnown RBP11.32□□□□□ -0.6
PRPF4B-208ENST00000490653 DUOX2Q9NRD8 1548 aa11.32□□□□□ -0.6
PRPF4B-208ENST00000490653 ARHGAP23Q9P227 1491 aa11.32□□□□□ -0.6
PRPF4B-208ENST00000490653 IQGAP1P46940 1657 aa11.31□□□□□ -0.6
PRPF4B-208ENST00000490653 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
PRPF4B-208ENST00000490653 CEP152O94986 1710 aa11.31□□□□□ -0.6
PRPF4B-208ENST00000490653 CROCC2H7BZ55 1655 aa11.3□□□□□ -0.6
PRPF4B-208ENST00000490653 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
PRPF4B-208ENST00000490653 ITGAEP38570 1179 aa11.29□□□□□ -0.6
PRPF4B-208ENST00000490653 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-208ENST00000490653 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
PRPF4B-208ENST00000490653 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
PRPF4B-208ENST00000490653 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
PRPF4B-208ENST00000490653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRPF4B-208ENST00000490653 EIF2AK4Q9P2K8 1649 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-208ENST00000490653 XIRP1Q702N8 1843 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-208ENST00000490653 ERBINQ96RT1 1412 aa11.27□□□□□ -0.6
PRPF4B-208ENST00000490653 UBR1Q8IWV7 1749 aa11.27□□□□□ -0.61
PRPF4B-208ENST00000490653 SLIT1O75093 1534 aa11.27□□□□□ -0.61
PRPF4B-208ENST00000490653 POTEAQ6S8J7 498 aa11.27□□□□□ -0.61
PRPF4B-208ENST00000490653 SCAF11Q99590 1463 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-208ENST00000490653 SYNMO15061 1565 aa11.26□□□□□ -0.61
PRPF4B-208ENST00000490653 IDI1Q13907 227 aa11.26□□□□□ -0.61
PRPF4B-208ENST00000490653 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
PRPF4B-208ENST00000490653 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
PRPF4B-208ENST00000490653 ARHGAP31Q2M1Z3 1444 aa11.24□□□□□ -0.61
PRPF4B-208ENST00000490653 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
PRPF4B-208ENST00000490653 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
PRPF4B-208ENST00000490653 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
PRPF4B-208ENST00000490653 KANK1Q14678 1352 aa11.23□□□□□ -0.61
PRPF4B-208ENST00000490653 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
PRPF4B-208ENST00000490653 PRDM15P57071 1507 aaPredicted RBP11.23□□□□□ -0.61
PRPF4B-208ENST00000490653 TET3O43151 1660 aa11.22□□□□□ -0.61
PRPF4B-208ENST00000490653 FAM135BQ49AJ0 1406 aa11.22□□□□□ -0.61
PRPF4B-208ENST00000490653 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
PRPF4B-208ENST00000490653 TMEM94Q12767 1356 aa11.21□□□□□ -0.61
PRPF4B-208ENST00000490653 PIK3C2BO00750 1634 aa11.2□□□□□ -0.62
PRPF4B-208ENST00000490653 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
PRPF4B-208ENST00000490653 LMTK2Q8IWU2 1503 aa11.19□□□□□ -0.62
PRPF4B-208ENST00000490653 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
PRPF4B-208ENST00000490653 NOS1P29475 1434 aa11.18□□□□□ -0.62
PRPF4B-208ENST00000490653 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
PRPF4B-208ENST00000490653 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
PRPF4B-208ENST00000490653 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
PRPF4B-208ENST00000490653 KCNA6P17658 529 aa11.16□□□□□ -0.62
PRPF4B-208ENST00000490653 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
PRPF4B-208ENST00000490653 ROBO1Q9Y6N7 1651 aa11.15□□□□□ -0.62
PRPF4B-208ENST00000490653 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
PRPF4B-208ENST00000490653 EID1Q9Y6B2 187 aa11.15□□□□□ -0.62
PRPF4B-208ENST00000490653 NWD1Q149M9 1564 aa11.15□□□□□ -0.62
PRPF4B-208ENST00000490653 NUP155O75694 1391 aa11.15□□□□□ -0.63
PRPF4B-208ENST00000490653 EFCAB6Q5THR3 1501 aa11.14□□□□□ -0.63
PRPF4B-208ENST00000490653 LRP6O75581 1613 aa11.14□□□□□ -0.63
PRPF4B-208ENST00000490653 EMP3P54852 163 aa11.14□□□□□ -0.63
PRPF4B-208ENST00000490653 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
PRPF4B-208ENST00000490653 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
PRPF4B-208ENST00000490653 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
PRPF4B-208ENST00000490653 ZFYVE9O95405 1425 aa11.13□□□□□ -0.63
PRPF4B-208ENST00000490653 SETD1AO15047 1707 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-208ENST00000490653 RRBP1Q9P2E9 1410 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-208ENST00000490653 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
PRPF4B-208ENST00000490653 UNC13BO14795 1591 aa11.11□□□□□ -0.63
PRPF4B-208ENST00000490653 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
PRPF4B-208ENST00000490653 BCANQ96GW7 911 aa11.11□□□□□ -0.63
PRPF4B-208ENST00000490653 E9PCH4 1651 aa11.11□□□□□ -0.63
PRPF4B-208ENST00000490653 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
PRPF4B-208ENST00000490653 G3V3G9 751 aa11.1□□□□□ -0.63
PRPF4B-208ENST00000490653 NKTRP30414 1462 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-208ENST00000490653 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 KDM5AP29375 1690 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 HS3ST6Q96QI5 342 aa11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 NAIPQ13075 1403 aa11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 ADAMTS13Q76LX8 1427 aa11.09□□□□□ -0.63
PRPF4B-208ENST00000490653 RPRD2Q5VT52 1461 aaKnown RBP11.08□□□□□ -0.64
PRPF4B-208ENST00000490653 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
PRPF4B-208ENST00000490653 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
PRPF4B-208ENST00000490653 GCC2Q8IWJ2 1684 aa11.08□□□□□ -0.64
PRPF4B-208ENST00000490653 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
PRPF4B-208ENST00000490653 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
PRPF4B-208ENST00000490653 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
PRPF4B-208ENST00000490653 PLEKHG1Q9ULL1 1385 aa11.06□□□□□ -0.64
PRPF4B-208ENST00000490653 FAM205CA6NFA0 338 aa11.06□□□□□ -0.64
PRPF4B-208ENST00000490653 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
PRPF4B-208ENST00000490653 KRTAP3-2Q9BYR7 98 aa11.06□□□□□ -0.64
PRPF4B-208ENST00000490653 PTPRUQ92729 1446 aa11.06□□□□□ -0.64
PRPF4B-208ENST00000490653 JCADQ9P266 1359 aa11.05□□□□□ -0.64
PRPF4B-208ENST00000490653 PPP1R15AO75807 674 aaPredicted RBP11.05□□□□□ -0.64
PRPF4B-208ENST00000490653 SRCAPQ6ZRS2 3230 aa11.05□□□□□ -0.64
PRPF4B-208ENST00000490653 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
PRPF4B-208ENST00000490653 UPF1Q92900 1129 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRPF4B-208ENST00000490653 DIP2AQ14689 1571 aa11.04□□□□□ -0.64
PRPF4B-208ENST00000490653 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
PRPF4B-208ENST00000490653 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
PRPF4B-208ENST00000490653 MSH6P52701 1360 aa11.03□□□□□ -0.64
PRPF4B-208ENST00000490653 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
PRPF4B-208ENST00000490653 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms