RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 STK24Q9Y6E0 443 aa7.65□□□□□ -1.18
PTPRK-213ENST00000490332 MLH3Q9UHC1 1453 aa7.64□□□□□ -1.19
PTPRK-213ENST00000490332 NPHP4O75161 1426 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-213ENST00000490332 YY1P25490 414 aa7.64□□□□□ -1.19
PTPRK-213ENST00000490332 MEX3CQ5U5Q3 659 aaKnown RBP7.64□□□□□ -1.19
PTPRK-213ENST00000490332 EFCAB2Q5VUJ9 269 aa7.64□□□□□ -1.19
PTPRK-213ENST00000490332 STRCP1A6NGW2 1772 aa7.64□□□□□ -1.19
PTPRK-213ENST00000490332 ATAD2Q6PL18 1390 aa7.63□□□□□ -1.19
PTPRK-213ENST00000490332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTPRK-213ENST00000490332 SPATA31A6Q5VVP1 1343 aa7.63□□□□□ -1.19
PTPRK-213ENST00000490332 PPARGC1BQ86YN6 1023 aaKnown RBP7.63□□□□□ -1.19
PTPRK-213ENST00000490332 TMC2Q8TDI7 906 aa7.63□□□□□ -1.19
PTPRK-213ENST00000490332 IQGAP1P46940 1657 aa7.63□□□□□ -1.19
PTPRK-213ENST00000490332 ROBO1Q9Y6N7 1651 aa7.63□□□□□ -1.19
PTPRK-213ENST00000490332 LRRC9Q6ZRR7 1453 aa7.62□□□□□ -1.19
PTPRK-213ENST00000490332 PTCD2Q8WV60 388 aaKnown RBP7.62□□□□□ -1.19
PTPRK-213ENST00000490332 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
PTPRK-213ENST00000490332 NUTM2BA6NNL0 878 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-213ENST00000490332 NUTM2EB1AL46 878 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-213ENST00000490332 NUTM2DQ5VT03 806 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-213ENST00000490332 NUTM2AQ8IVF1 878 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-213ENST00000490332 KDM5DQ9BY66 1539 aa7.61□□□□□ -1.19
PTPRK-213ENST00000490332 NUP153P49790 1475 aaKnown RBP7.61□□□□□ -1.19
PTPRK-213ENST00000490332 PHLPP1O60346 1717 aa7.61□□□□□ -1.19
PTPRK-213ENST00000490332 MYO5CQ9NQX4 1742 aa7.61□□□□□ -1.19
PTPRK-213ENST00000490332 FGD6Q6ZV73 1430 aa7.61□□□□□ -1.19
PTPRK-213ENST00000490332 CCDC125Q86Z20 511 aa7.6□□□□□ -1.19
PTPRK-213ENST00000490332 RGS12O14924 1447 aa7.6□□□□□ -1.19
PTPRK-213ENST00000490332 RGS20O76081 388 aa7.59□□□□□ -1.19
PTPRK-213ENST00000490332 AFAP1Q8N556 730 aa7.59□□□□□ -1.19
PTPRK-213ENST00000490332 ABCC1P33527 1531 aa7.58□□□□□ -1.2
PTPRK-213ENST00000490332 XIRP1Q702N8 1843 aaKnown RBP7.58□□□□□ -1.2
PTPRK-213ENST00000490332 SENP3-EIF4A1A0A087X0R7 540 aa7.58□□□□□ -1.2
PTPRK-213ENST00000490332 STK25O00506 426 aa7.58□□□□□ -1.2
PTPRK-213ENST00000490332 PPP1R37O75864 691 aa7.58□□□□□ -1.2
PTPRK-213ENST00000490332 THEMISQ8N1K5 641 aaPredicted RBP7.58□□□□□ -1.2
PTPRK-213ENST00000490332 LRP6O75581 1613 aa7.58□□□□□ -1.2
PTPRK-213ENST00000490332 CLIP1P30622 1438 aa7.58□□□□□ -1.2
PTPRK-213ENST00000490332 ITSN2Q9NZM3 1697 aa7.57□□□□□ -1.2
PTPRK-213ENST00000490332 KIF14Q15058 1648 aa7.57□□□□□ -1.2
PTPRK-213ENST00000490332 NHSL1Q5SYE7 1610 aa7.57□□□□□ -1.2
PTPRK-213ENST00000490332 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
PTPRK-213ENST00000490332 PPP4R3BQ5MIZ7 849 aa7.57□□□□□ -1.2
PTPRK-213ENST00000490332 CCER1Q8TC90 406 aaPredicted RBP7.57□□□□□ -1.2
PTPRK-213ENST00000490332 IRX2Q9BZI1 471 aaPredicted RBP7.57□□□□□ -1.2
PTPRK-213ENST00000490332 TAOK2Q9UL54 1235 aa7.57□□□□□ -1.2
PTPRK-213ENST00000490332 EP400Q96L91 3159 aa7.57□□□□□ -1.2
PTPRK-213ENST00000490332 FAM135AQ9P2D6 1515 aa7.57□□□□□ -1.2
PTPRK-213ENST00000490332 PTPN5P54829 565 aa7.56□□□□□ -1.2
PTPRK-213ENST00000490332 VPS9D1Q9Y2B5 631 aa7.56□□□□□ -1.2
PTPRK-213ENST00000490332 NWD1Q149M9 1564 aa7.55□□□□□ -1.2
PTPRK-213ENST00000490332 VPS8Q8N3P4 1428 aa7.55□□□□□ -1.2
PTPRK-213ENST00000490332 SHPRHQ149N8 1683 aa7.55□□□□□ -1.2
PTPRK-213ENST00000490332 KCNK17Q96T54 332 aa7.55□□□□□ -1.2
PTPRK-213ENST00000490332 KIDINS220Q9ULH0 1771 aa7.55□□□□□ -1.2
PTPRK-213ENST00000490332 TNRQ92752 1358 aa7.55□□□□□ -1.2
PTPRK-213ENST00000490332 ATP7AQ04656 1500 aa7.54□□□□□ -1.2
PTPRK-213ENST00000490332 COL16A1Q07092 1604 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-213ENST00000490332 A0A0G2JS52 829 aa7.54□□□□□ -1.2
PTPRK-213ENST00000490332 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
PTPRK-213ENST00000490332 STAC3Q96MF2 364 aa7.54□□□□□ -1.2
PTPRK-213ENST00000490332 PRXQ9BXM0 1461 aa7.54□□□□□ -1.2
PTPRK-213ENST00000490332 UGGT1Q9NYU2 1555 aa7.54□□□□□ -1.2
PTPRK-213ENST00000490332 ARHGAP5Q13017 1502 aa7.53□□□□□ -1.2
PTPRK-213ENST00000490332 FOXK1P85037 733 aa7.53□□□□□ -1.2
PTPRK-213ENST00000490332 NLRP1Q9C000 1473 aa7.53□□□□□ -1.2
PTPRK-213ENST00000490332 SAMD9Q5K651 1589 aa7.53□□□□□ -1.2
PTPRK-213ENST00000490332 ZC3H13Q5T200 1668 aaKnown RBP7.53□□□□□ -1.2
PTPRK-213ENST00000490332 AFF2P51816 1311 aa7.52□□□□□ -1.2
PTPRK-213ENST00000490332 P3H3Q8IVL6 736 aa7.52□□□□□ -1.21
PTPRK-213ENST00000490332 PLPP6Q8IY26 295 aa7.52□□□□□ -1.21
PTPRK-213ENST00000490332 BHMG1C9JSJ3 638 aaPredicted RBP7.51□□□□□ -1.21
PTPRK-213ENST00000490332 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
PTPRK-213ENST00000490332 SLC4A5Q9BY07 1137 aa7.5□□□□□ -1.21
PTPRK-213ENST00000490332 QTRT2Q9H974 415 aaKnown RBP7.5□□□□□ -1.21
PTPRK-213ENST00000490332 TMEM94Q12767 1356 aa7.49□□□□□ -1.21
PTPRK-213ENST00000490332 ABCC3O15438 1527 aa7.49□□□□□ -1.21
PTPRK-213ENST00000490332 DSG2Q14126 1118 aa7.49□□□□□ -1.21
PTPRK-213ENST00000490332 PLXNC1O60486 1568 aa7.49□□□□□ -1.21
PTPRK-213ENST00000490332 PZPP20742 1482 aa7.49□□□□□ -1.21
PTPRK-213ENST00000490332 GPHNQ9NQX3 736 aaPredicted RBP7.48□□□□□ -1.21
PTPRK-213ENST00000490332 CEP350Q5VT06 3117 aa7.47□□□□□ -1.21
PTPRK-213ENST00000490332 MAP3K1Q13233 1512 aa7.47□□□□□ -1.21
PTPRK-213ENST00000490332 MSH6P52701 1360 aa7.47□□□□□ -1.21
PTPRK-213ENST00000490332 C1QTNF8P60827 252 aa7.47□□□□□ -1.21
PTPRK-213ENST00000490332 GGT6Q6P531 493 aa7.47□□□□□ -1.21
PTPRK-213ENST00000490332 SLAIN2Q9P270 581 aa7.47□□□□□ -1.21
PTPRK-213ENST00000490332 AHDC1Q5TGY3 1603 aaPredicted RBP7.47□□□□□ -1.21
PTPRK-213ENST00000490332 TIAM1Q13009 1591 aa7.46□□□□□ -1.21
PTPRK-213ENST00000490332 BLMP54132 1417 aaPredicted RBP7.46□□□□□ -1.21
PTPRK-213ENST00000490332 MIA2Q96PC5 1412 aa7.46□□□□□ -1.21
PTPRK-213ENST00000490332 TBC1D12O60347 775 aa7.46□□□□□ -1.22
PTPRK-213ENST00000490332 BCL2L12Q9HB09 334 aa7.46□□□□□ -1.22
PTPRK-213ENST00000490332 SCAF11Q99590 1463 aaKnown RBP7.46□□□□□ -1.22
PTPRK-213ENST00000490332 CLSPNQ9HAW4 1339 aa7.46□□□□□ -1.22
PTPRK-213ENST00000490332 A2MP01023 1474 aa7.45□□□□□ -1.22
PTPRK-213ENST00000490332 CDK11AQ9UQ88 783 aaPredicted RBP7.45□□□□□ -1.22
PTPRK-213ENST00000490332 CDC42BPBQ9Y5S2 1711 aa7.44□□□□□ -1.22
PTPRK-213ENST00000490332 BCL9LQ86UU0 1499 aa7.44□□□□□ -1.22
PTPRK-213ENST00000490332 PRDM15P57071 1507 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms