RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LRRC59Q96AG4 307 aaKnown RBP17.68■□□□□ 0.42
ACTN4-206ENST00000489451 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
ACTN4-206ENST00000489451 CCDC144AA2RUR9 1427 aa17.67■□□□□ 0.42
ACTN4-206ENST00000489451 SOS2Q07890 1332 aaPredicted RBP17.67■□□□□ 0.42
ACTN4-206ENST00000489451 TECPR2O15040 1411 aa17.66■□□□□ 0.42
ACTN4-206ENST00000489451 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
ACTN4-206ENST00000489451 QTRT2Q9H974 415 aaKnown RBP17.66■□□□□ 0.42
ACTN4-206ENST00000489451 COL22A1Q8NFW1 1626 aaPredicted RBP17.65■□□□□ 0.42
ACTN4-206ENST00000489451 PIK3C2GO75747 1445 aa17.64■□□□□ 0.42
ACTN4-206ENST00000489451 PLEKHH1Q9ULM0 1364 aa17.64■□□□□ 0.41
ACTN4-206ENST00000489451 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
ACTN4-206ENST00000489451 NGLY1Q96IV0 654 aa17.63■□□□□ 0.41
ACTN4-206ENST00000489451 C8orf37Q96NL8 207 aa17.63■□□□□ 0.41
ACTN4-206ENST00000489451 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
ACTN4-206ENST00000489451 PXDNQ92626 1479 aa17.62■□□□□ 0.41
ACTN4-206ENST00000489451 ANKRD30BQ9BXX2 1392 aa17.61■□□□□ 0.41
ACTN4-206ENST00000489451 WAPLQ7Z5K2 1190 aa17.6■□□□□ 0.41
ACTN4-206ENST00000489451 NRXN1Q9ULB1 1477 aa17.6■□□□□ 0.41
ACTN4-206ENST00000489451 FMN2Q9NZ56 1722 aa17.6■□□□□ 0.41
ACTN4-206ENST00000489451 MYOM2P54296 1465 aa17.59■□□□□ 0.41
ACTN4-206ENST00000489451 ABCC11Q96J66 1382 aa17.59■□□□□ 0.41
ACTN4-206ENST00000489451 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
ACTN4-206ENST00000489451 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
ACTN4-206ENST00000489451 STK26Q9P289 416 aa17.58■□□□□ 0.4
ACTN4-206ENST00000489451 YTHDC2Q9H6S0 1430 aaKnown RBP17.56■□□□□ 0.4
ACTN4-206ENST00000489451 MARF1Q9Y4F3 1742 aaKnown RBP17.56■□□□□ 0.4
ACTN4-206ENST00000489451 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
ACTN4-206ENST00000489451 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
ACTN4-206ENST00000489451 RGPD8O14715 1765 aaPredicted RBP17.55■□□□□ 0.4
ACTN4-206ENST00000489451 NUTM2FA1L443 756 aa17.54■□□□□ 0.4
ACTN4-206ENST00000489451 XPCQ01831 940 aaPredicted RBP17.54■□□□□ 0.4
ACTN4-206ENST00000489451 EP400Q96L91 3159 aa17.54■□□□□ 0.4
ACTN4-206ENST00000489451 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
ACTN4-206ENST00000489451 NPHP3Q7Z494 1330 aa17.53■□□□□ 0.4
ACTN4-206ENST00000489451 FOXO3O43524 673 aa17.53■□□□□ 0.4
ACTN4-206ENST00000489451 FNBP4Q8N3X1 1017 aaPredicted RBP17.52■□□□□ 0.4
ACTN4-206ENST00000489451 C14orf93Q9H972 538 aaKnown RBP17.52■□□□□ 0.4
ACTN4-206ENST00000489451 ATRNO75882 1429 aa17.52■□□□□ 0.4
ACTN4-206ENST00000489451 KIF1AQ12756 1690 aa17.52■□□□□ 0.39
ACTN4-206ENST00000489451 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
ACTN4-206ENST00000489451 ADGRB1O14514 1584 aa17.5■□□□□ 0.39
ACTN4-206ENST00000489451 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
ACTN4-206ENST00000489451 USP32Q8NFA0 1604 aa17.49■□□□□ 0.39
ACTN4-206ENST00000489451 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
ACTN4-206ENST00000489451 USP21Q9UK80 565 aa17.48■□□□□ 0.39
ACTN4-206ENST00000489451 TRPC5Q9UL62 973 aaPredicted RBP17.47■□□□□ 0.39
ACTN4-206ENST00000489451 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
ACTN4-206ENST00000489451 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
ACTN4-206ENST00000489451 SPATA31A3Q5VYP0 1347 aa17.46■□□□□ 0.38
ACTN4-206ENST00000489451 ADGRB2O60241 1585 aa17.45■□□□□ 0.38
ACTN4-206ENST00000489451 ABCA3Q99758 1704 aa17.45■□□□□ 0.38
ACTN4-206ENST00000489451 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
ACTN4-206ENST00000489451 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
ACTN4-206ENST00000489451 SLIT2O94813 1529 aa17.43■□□□□ 0.38
ACTN4-206ENST00000489451 YY1P25490 414 aa17.43■□□□□ 0.38
ACTN4-206ENST00000489451 PRAM1Q96QH2 718 aa17.43■□□□□ 0.38
ACTN4-206ENST00000489451 GLI3P10071 1580 aa17.43■□□□□ 0.38
ACTN4-206ENST00000489451 ACIN1Q9UKV3 1341 aaKnown RBP17.43■□□□□ 0.38
ACTN4-206ENST00000489451 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
ACTN4-206ENST00000489451 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
ACTN4-206ENST00000489451 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
ACTN4-206ENST00000489451 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
ACTN4-206ENST00000489451 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
ACTN4-206ENST00000489451 PHF8Q9UPP1 1060 aa17.4■□□□□ 0.38
ACTN4-206ENST00000489451 SF3B2Q13435 895 aaKnown RBP17.39■□□□□ 0.37
ACTN4-206ENST00000489451 PLCH1Q4KWH8 1693 aa17.39■□□□□ 0.37
ACTN4-206ENST00000489451 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
ACTN4-206ENST00000489451 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
ACTN4-206ENST00000489451 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
ACTN4-206ENST00000489451 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
ACTN4-206ENST00000489451 PRR36Q9H6K5 1346 aa17.37■□□□□ 0.37
ACTN4-206ENST00000489451 BRWD3Q6RI45 1802 aa17.37■□□□□ 0.37
ACTN4-206ENST00000489451 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
ACTN4-206ENST00000489451 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
ACTN4-206ENST00000489451 ARHGEF28Q8N1W1 1705 aaKnown RBP17.36■□□□□ 0.37
ACTN4-206ENST00000489451 PSDA5PKW4 1024 aaPredicted RBP17.36■□□□□ 0.37
ACTN4-206ENST00000489451 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
ACTN4-206ENST00000489451 TRAK1Q9UPV9 953 aa17.35■□□□□ 0.37
ACTN4-206ENST00000489451 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
ACTN4-206ENST00000489451 CRYBG1Q9Y4K1 1723 aa17.35■□□□□ 0.37
ACTN4-206ENST00000489451 HRCP23327 699 aa17.34■□□□□ 0.37
ACTN4-206ENST00000489451 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
ACTN4-206ENST00000489451 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
ACTN4-206ENST00000489451 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
ACTN4-206ENST00000489451 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
ACTN4-206ENST00000489451 TULP4Q9NRJ4 1543 aa17.34■□□□□ 0.37
ACTN4-206ENST00000489451 DCAF11Q8TEB1 546 aa17.33■□□□□ 0.36
ACTN4-206ENST00000489451 KDM2AQ9Y2K7 1162 aa17.33■□□□□ 0.36
ACTN4-206ENST00000489451 POGKQ9P215 609 aa17.32■□□□□ 0.36
ACTN4-206ENST00000489451 MINK1Q8N4C8 1332 aaPredicted RBP17.31■□□□□ 0.36
ACTN4-206ENST00000489451 PSME1Q06323 249 aa17.3■□□□□ 0.36
ACTN4-206ENST00000489451 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
ACTN4-206ENST00000489451 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
ACTN4-206ENST00000489451 ATP7BP35670 1465 aa17.29■□□□□ 0.36
ACTN4-206ENST00000489451 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-206ENST00000489451 FAM83GA6ND36 823 aa17.27■□□□□ 0.36
ACTN4-206ENST00000489451 VPS72Q15906 364 aa17.27■□□□□ 0.36
ACTN4-206ENST00000489451 TOPAZ1Q8N9V7 1692 aa17.26■□□□□ 0.35
ACTN4-206ENST00000489451 ITSN1Q15811 1721 aa17.26■□□□□ 0.35
ACTN4-206ENST00000489451 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms