RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 ARID4BQ4LE39 1312 aaPredicted RBP10.81□□□□□ -0.68
SCMH1-216ENST00000489421 AXIN2Q9Y2T1 843 aa10.8□□□□□ -0.68
SCMH1-216ENST00000489421 CAMSAP2Q08AD1 1489 aa10.8□□□□□ -0.68
SCMH1-216ENST00000489421 ARHGEF5Q12774 1597 aa10.79□□□□□ -0.68
SCMH1-216ENST00000489421 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
SCMH1-216ENST00000489421 EMILIN3Q9NT22 766 aa10.79□□□□□ -0.68
SCMH1-216ENST00000489421 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
SCMH1-216ENST00000489421 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
SCMH1-216ENST00000489421 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
SCMH1-216ENST00000489421 FGD6Q6ZV73 1430 aa10.78□□□□□ -0.68
SCMH1-216ENST00000489421 KIAA1107Q9UPP5 1409 aa10.78□□□□□ -0.68
SCMH1-216ENST00000489421 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCMH1-216ENST00000489421 ZNF644Q9H582 1327 aaPredicted RBP10.78□□□□□ -0.68
SCMH1-216ENST00000489421 MYO3AQ8NEV4 1616 aa10.77□□□□□ -0.68
SCMH1-216ENST00000489421 MIA2Q96PC5 1412 aa10.77□□□□□ -0.68
SCMH1-216ENST00000489421 PLEKHH2Q8IVE3 1493 aa10.77□□□□□ -0.69
SCMH1-216ENST00000489421 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
SCMH1-216ENST00000489421 PBX2P40425 430 aa10.77□□□□□ -0.69
SCMH1-216ENST00000489421 MLECQ14165 292 aa10.77□□□□□ -0.69
SCMH1-216ENST00000489421 CEP152O94986 1710 aa10.77□□□□□ -0.69
SCMH1-216ENST00000489421 HNRNPMP52272 730 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCMH1-216ENST00000489421 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
SCMH1-216ENST00000489421 PAXIP1Q6ZW49 1069 aaPredicted RBP10.76□□□□□ -0.69
SCMH1-216ENST00000489421 MAST1Q9Y2H9 1570 aa10.76□□□□□ -0.69
SCMH1-216ENST00000489421 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
SCMH1-216ENST00000489421 ZNF777Q9ULD5 760 aaPredicted RBP10.75□□□□□ -0.69
SCMH1-216ENST00000489421 MROH1Q8NDA8 1641 aa10.74□□□□□ -0.69
SCMH1-216ENST00000489421 RNF17Q9BXT8 1623 aaKnown RBP10.74□□□□□ -0.69
SCMH1-216ENST00000489421 FAM50AQ14320 339 aaKnown RBP10.74□□□□□ -0.69
SCMH1-216ENST00000489421 A2MP01023 1474 aa10.74□□□□□ -0.69
SCMH1-216ENST00000489421 CCDC141Q6ZP82 1450 aa10.74□□□□□ -0.69
SCMH1-216ENST00000489421 CEBPAP49715 358 aaPredicted RBP10.73□□□□□ -0.69
SCMH1-216ENST00000489421 TCOF1Q13428 1488 aaKnown RBP10.73□□□□□ -0.69
SCMH1-216ENST00000489421 PTPN23Q9H3S7 1636 aa10.73□□□□□ -0.69
SCMH1-216ENST00000489421 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
SCMH1-216ENST00000489421 EVI5O60447 810 aa10.72□□□□□ -0.69
SCMH1-216ENST00000489421 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
SCMH1-216ENST00000489421 ANO8Q9HCE9 1232 aaPredicted RBP10.72□□□□□ -0.69
SCMH1-216ENST00000489421 CFDP1Q9UEE9 299 aaPredicted RBP10.72□□□□□ -0.69
SCMH1-216ENST00000489421 EIF2AK4Q9P2K8 1649 aaKnown RBP10.72□□□□□ -0.69
SCMH1-216ENST00000489421 ARHGAP33O14559 1287 aa10.71□□□□□ -0.69
SCMH1-216ENST00000489421 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
SCMH1-216ENST00000489421 HSPA2P54652 639 aa10.71□□□□□ -0.69
SCMH1-216ENST00000489421 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
SCMH1-216ENST00000489421 ZC3H13Q5T200 1668 aaKnown RBP10.7□□□□□ -0.7
SCMH1-216ENST00000489421 SPAG9O60271 1321 aaKnown RBP10.7□□□□□ -0.7
SCMH1-216ENST00000489421 PSEN2P49810 448 aa10.7□□□□□ -0.7
SCMH1-216ENST00000489421 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
SCMH1-216ENST00000489421 ZNF454Q8N9F8 522 aa10.7□□□□□ -0.7
SCMH1-216ENST00000489421 RTEL1-TNFRSF6BF6WH68 1400 aa10.69□□□□□ -0.7
SCMH1-216ENST00000489421 FOSBP53539 338 aa10.69□□□□□ -0.7
SCMH1-216ENST00000489421 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
SCMH1-216ENST00000489421 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
SCMH1-216ENST00000489421 DEPDC5O75140 1603 aa10.69□□□□□ -0.7
SCMH1-216ENST00000489421 CAMSAP1Q5T5Y3 1602 aa10.69□□□□□ -0.7
SCMH1-216ENST00000489421 CEP170BQ9Y4F5 1589 aaPredicted RBP10.68□□□□□ -0.7
SCMH1-216ENST00000489421 PTPRKQ15262 1439 aa10.67□□□□□ -0.7
SCMH1-216ENST00000489421 ITGAEP38570 1179 aa10.67□□□□□ -0.7
SCMH1-216ENST00000489421 RNF166Q96A37 237 aaPredicted RBP10.67□□□□□ -0.7
SCMH1-216ENST00000489421 HRCP23327 699 aa10.66□□□□□ -0.7
SCMH1-216ENST00000489421 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
SCMH1-216ENST00000489421 KDM5DQ9BY66 1539 aa10.65□□□□□ -0.7
SCMH1-216ENST00000489421 PTGER2P43116 358 aa10.65□□□□□ -0.7
SCMH1-216ENST00000489421 ADGRD1Q6QNK2 874 aa10.65□□□□□ -0.7
SCMH1-216ENST00000489421 KCNK17Q96T54 332 aa10.65□□□□□ -0.7
SCMH1-216ENST00000489421 ABCC5O15440 1437 aa10.65□□□□□ -0.7
SCMH1-216ENST00000489421 UHRF1BP1Q6BDS2 1440 aa10.65□□□□□ -0.7
SCMH1-216ENST00000489421 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.71
SCMH1-216ENST00000489421 DPYSL4O14531 572 aa10.64□□□□□ -0.71
SCMH1-216ENST00000489421 FAM135AQ9P2D6 1515 aa10.63□□□□□ -0.71
SCMH1-216ENST00000489421 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
SCMH1-216ENST00000489421 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
SCMH1-216ENST00000489421 NPATQ14207 1427 aa10.63□□□□□ -0.71
SCMH1-216ENST00000489421 NEURL4Q96JN8 1562 aa10.63□□□□□ -0.71
SCMH1-216ENST00000489421 DHX29Q7Z478 1369 aaKnown RBP10.63□□□□□ -0.71
SCMH1-216ENST00000489421 ABCC3O15438 1527 aa10.63□□□□□ -0.71
SCMH1-216ENST00000489421 SHANK2Q9UPX8 1470 aa10.62□□□□□ -0.71
SCMH1-216ENST00000489421 UBR1Q8IWV7 1749 aa10.62□□□□□ -0.71
SCMH1-216ENST00000489421 DAPK1P53355 1430 aa10.62□□□□□ -0.71
SCMH1-216ENST00000489421 SETD5Q9C0A6 1442 aa10.62□□□□□ -0.71
SCMH1-216ENST00000489421 PRDM15P57071 1507 aaPredicted RBP10.62□□□□□ -0.71
SCMH1-216ENST00000489421 ROCK1Q13464 1354 aa10.62□□□□□ -0.71
SCMH1-216ENST00000489421 ZMYM3Q14202 1370 aa10.62□□□□□ -0.71
SCMH1-216ENST00000489421 STRCP1A6NGW2 1772 aa10.62□□□□□ -0.71
SCMH1-216ENST00000489421 HFM1A2PYH4 1435 aa10.61□□□□□ -0.71
SCMH1-216ENST00000489421 ADAM33Q9BZ11 813 aa10.61□□□□□ -0.71
SCMH1-216ENST00000489421 LTBP4Q8N2S1 1624 aa10.61□□□□□ -0.71
SCMH1-216ENST00000489421 NCOA1Q15788 1441 aa10.6□□□□□ -0.71
SCMH1-216ENST00000489421 TK2O00142 265 aa10.6□□□□□ -0.71
SCMH1-216ENST00000489421 ZDHHC16Q969W1 377 aa10.6□□□□□ -0.71
SCMH1-216ENST00000489421 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
SCMH1-216ENST00000489421 PZPP20742 1482 aa10.6□□□□□ -0.71
SCMH1-216ENST00000489421 SPATA31D1Q6ZQQ2 1576 aa10.6□□□□□ -0.71
SCMH1-216ENST00000489421 NAIPQ13075 1403 aa10.59□□□□□ -0.71
SCMH1-216ENST00000489421 DUOX2Q9NRD8 1548 aa10.59□□□□□ -0.71
SCMH1-216ENST00000489421 HRO43593 1189 aa10.59□□□□□ -0.71
SCMH1-216ENST00000489421 CHIC2Q9UKJ5 165 aa10.59□□□□□ -0.71
SCMH1-216ENST00000489421 RAB3GAP2Q9H2M9 1393 aa10.59□□□□□ -0.71
SCMH1-216ENST00000489421 VWDEQ8N2E2 1590 aa10.58□□□□□ -0.72
SCMH1-216ENST00000489421 GGT6Q6P531 493 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms