RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 EVC2Q86UK5 1308 aa27.35■■□□□ 1.97
ATP1A1-208ENST00000488733 SCAF1Q9H7N4 1312 aaKnown RBP27.35■■□□□ 1.97
ATP1A1-208ENST00000488733 TMC1Q8TDI8 760 aa27.35■■□□□ 1.97
ATP1A1-208ENST00000488733 TECPR2O15040 1411 aa27.35■■□□□ 1.97
ATP1A1-208ENST00000488733 POGKQ9P215 609 aa27.34■■□□□ 1.97
ATP1A1-208ENST00000488733 FAM9BQ8IZU0 186 aa27.33■■□□□ 1.97
ATP1A1-208ENST00000488733 KNDC1Q76NI1 1749 aa27.33■■□□□ 1.97
ATP1A1-208ENST00000488733 NPC1L1Q9UHC9 1359 aa27.33■■□□□ 1.96
ATP1A1-208ENST00000488733 SAFB2Q14151 953 aaKnown RBP eCLIP27.33■■□□□ 1.96
ATP1A1-208ENST00000488733 NLRP13Q86W25 1043 aa27.32■■□□□ 1.96
ATP1A1-208ENST00000488733 HNRNPUQ00839 825 aaKnown RBP eCLIP27.3■■□□□ 1.96
ATP1A1-208ENST00000488733 GTF3C3Q9Y5Q9 886 aa27.3■■□□□ 1.96
ATP1A1-208ENST00000488733 CPS1P31327 1500 aa27.3■■□□□ 1.96
ATP1A1-208ENST00000488733 CC2D1BQ5T0F9 858 aaKnown RBP27.3■■□□□ 1.96
ATP1A1-208ENST00000488733 NPHP4O75161 1426 aaPredicted RBP27.29■■□□□ 1.96
ATP1A1-208ENST00000488733 FAM135BQ49AJ0 1406 aa27.29■■□□□ 1.96
ATP1A1-208ENST00000488733 AMER1Q5JTC6 1135 aaPredicted RBP27.28■■□□□ 1.96
ATP1A1-208ENST00000488733 SIRT1Q96EB6 747 aa27.28■■□□□ 1.96
ATP1A1-208ENST00000488733 PTPRUQ92729 1446 aa27.28■■□□□ 1.96
ATP1A1-208ENST00000488733 PLEKHH1Q9ULM0 1364 aa27.27■■□□□ 1.96
ATP1A1-208ENST00000488733 WAPLQ7Z5K2 1190 aa27.27■■□□□ 1.96
ATP1A1-208ENST00000488733 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.96
ATP1A1-208ENST00000488733 PNISRQ8TF01 805 aaKnown RBP27.26■■□□□ 1.95
ATP1A1-208ENST00000488733 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
ATP1A1-208ENST00000488733 MINK1Q8N4C8 1332 aaPredicted RBP27.25■■□□□ 1.95
ATP1A1-208ENST00000488733 NCKAP5LQ9HCH0 1330 aa27.25■■□□□ 1.95
ATP1A1-208ENST00000488733 ROBO2Q9HCK4 1378 aa27.24■■□□□ 1.95
ATP1A1-208ENST00000488733 LMTK3Q96Q04 1460 aa27.24■■□□□ 1.95
ATP1A1-208ENST00000488733 AMOTL2Q9Y2J4 779 aa27.23■■□□□ 1.95
ATP1A1-208ENST00000488733 NINLQ9Y2I6 1382 aa27.22■■□□□ 1.95
ATP1A1-208ENST00000488733 PTCH1Q13635 1447 aa27.21■■□□□ 1.95
ATP1A1-208ENST00000488733 HSPA2P54652 639 aa27.2■■□□□ 1.94
ATP1A1-208ENST00000488733 XRN1Q8IZH2 1706 aaKnown RBP27.2■■□□□ 1.94
ATP1A1-208ENST00000488733 CARD14Q9BXL6 1004 aa27.19■■□□□ 1.94
ATP1A1-208ENST00000488733 SLC12A5Q9H2X9 1139 aa27.19■■□□□ 1.94
ATP1A1-208ENST00000488733 ATAD2Q6PL18 1390 aa27.18■■□□□ 1.94
ATP1A1-208ENST00000488733 SRPK2P78362 688 aaKnown RBP27.16■■□□□ 1.94
ATP1A1-208ENST00000488733 CABP2Q9NPB3 220 aa27.16■■□□□ 1.94
ATP1A1-208ENST00000488733 ZBED9Q6R2W3 1325 aa27.15■■□□□ 1.94
ATP1A1-208ENST00000488733 KCNA6P17658 529 aa27.14■■□□□ 1.94
ATP1A1-208ENST00000488733 ANKRD36BQ8N2N9 1353 aa27.13■■□□□ 1.93
ATP1A1-208ENST00000488733 PPP2R1AP30153 589 aa27.13■■□□□ 1.93
ATP1A1-208ENST00000488733 CDK19Q9BWU1 502 aa27.13■■□□□ 1.93
ATP1A1-208ENST00000488733 USP32Q8NFA0 1604 aa27.11■■□□□ 1.93
ATP1A1-208ENST00000488733 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
ATP1A1-208ENST00000488733 NSD3Q9BZ95 1437 aa27.11■■□□□ 1.93
ATP1A1-208ENST00000488733 INSRP06213 1382 aa27.1■■□□□ 1.93
ATP1A1-208ENST00000488733 WASLO00401 505 aaPredicted RBP27.09■■□□□ 1.93
ATP1A1-208ENST00000488733 ADGRB2O60241 1585 aa27.09■■□□□ 1.93
ATP1A1-208ENST00000488733 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.08■■□□□ 1.93
ATP1A1-208ENST00000488733 CGNL1Q0VF96 1302 aa27.06■■□□□ 1.92
ATP1A1-208ENST00000488733 TERF2IPQ9NYB0 399 aa27.06■■□□□ 1.92
ATP1A1-208ENST00000488733 NSD2O96028 1365 aa27.04■■□□□ 1.92
ATP1A1-208ENST00000488733 NWD1Q149M9 1564 aa27.04■■□□□ 1.92
ATP1A1-208ENST00000488733 STRCQ7RTU9 1775 aa27.01■■□□□ 1.91
ATP1A1-208ENST00000488733 MORC1Q86VD1 984 aa27■■□□□ 1.91
ATP1A1-208ENST00000488733 HDGFL2Q7Z4V5 671 aaPredicted RBP26.99■■□□□ 1.91
ATP1A1-208ENST00000488733 A0A1W2PP64 1363 aa26.99■■□□□ 1.91
ATP1A1-208ENST00000488733 NUDT16Q96DE0 195 aaKnown RBP26.96■■□□□ 1.91
ATP1A1-208ENST00000488733 NKTRP30414 1462 aaKnown RBP26.96■■□□□ 1.91
ATP1A1-208ENST00000488733 ATP7BP35670 1465 aa26.96■■□□□ 1.91
ATP1A1-208ENST00000488733 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
ATP1A1-208ENST00000488733 CD163L1Q9NR16 1453 aa26.95■■□□□ 1.9
ATP1A1-208ENST00000488733 WDR43Q15061 677 aaKnown RBP eCLIP26.94■■□□□ 1.91e-7■□□□□ 8.1
ATP1A1-208ENST00000488733 BLMP54132 1417 aaPredicted RBP26.94■■□□□ 1.9
ATP1A1-208ENST00000488733 PRR36Q9H6K5 1346 aa26.93■■□□□ 1.9
ATP1A1-208ENST00000488733 CCDC61Q9Y6R9 512 aa26.93■■□□□ 1.9
ATP1A1-208ENST00000488733 PPIP5K1Q6PFW1 1433 aa26.93■■□□□ 1.9
ATP1A1-208ENST00000488733 NALCNQ8IZF0 1738 aa26.92■■□□□ 1.9
ATP1A1-208ENST00000488733 ADGRL3Q9HAR2 1447 aa26.92■■□□□ 1.9
ATP1A1-208ENST00000488733 RBM33Q96EV2 1170 aaKnown RBP26.91■■□□□ 1.9
ATP1A1-208ENST00000488733 POLR3AO14802 1390 aaPredicted RBP26.91■■□□□ 1.9
ATP1A1-208ENST00000488733 CDC42BPGQ6DT37 1551 aa26.9■■□□□ 1.9
ATP1A1-208ENST00000488733 PROSER2Q86WR7 435 aaPredicted RBP26.89■■□□□ 1.9
ATP1A1-208ENST00000488733 ADAMTS8Q9UP79 889 aa26.88■■□□□ 1.89
ATP1A1-208ENST00000488733 NUTM2FA1L443 756 aa26.87■■□□□ 1.89
ATP1A1-208ENST00000488733 TOPAZ1Q8N9V7 1692 aa26.87■■□□□ 1.89
ATP1A1-208ENST00000488733 NEFLP07196 543 aa26.86■■□□□ 1.89
ATP1A1-208ENST00000488733 C14orf37Q86TY3 774 aa26.86■■□□□ 1.89
ATP1A1-208ENST00000488733 STRCP1A6NGW2 1772 aa26.86■■□□□ 1.89
ATP1A1-208ENST00000488733 ANKARQ7Z5J8 1434 aa26.86■■□□□ 1.89
ATP1A1-208ENST00000488733 SMG6Q86US8 1419 aaKnown RBP26.85■■□□□ 1.89
ATP1A1-208ENST00000488733 FMN2Q9NZ56 1722 aa26.85■■□□□ 1.89
ATP1A1-208ENST00000488733 CPSF1Q10570 1443 aaKnown RBP26.84■■□□□ 1.89
ATP1A1-208ENST00000488733 ANKRD26Q9UPS8 1709 aa26.84■■□□□ 1.89
ATP1A1-208ENST00000488733 FYB1O15117 783 aa26.84■■□□□ 1.89
ATP1A1-208ENST00000488733 PDE3BQ13370 1112 aa26.82■■□□□ 1.88
ATP1A1-208ENST00000488733 CFAP53Q96M91 514 aa26.82■■□□□ 1.88
ATP1A1-208ENST00000488733 DMRT2Q9Y5R5 561 aa26.82■■□□□ 1.88
ATP1A1-208ENST00000488733 PLEKHG3A1L390 1219 aa26.81■■□□□ 1.88
ATP1A1-208ENST00000488733 ZNF692Q9BU19 519 aaPredicted RBP26.81■■□□□ 1.88
ATP1A1-208ENST00000488733 TMEM94Q12767 1356 aa26.81■■□□□ 1.88
ATP1A1-208ENST00000488733 ITSN1Q15811 1721 aa26.8■■□□□ 1.88
ATP1A1-208ENST00000488733 TNNT2P45379 298 aaPredicted RBP26.8■■□□□ 1.88
ATP1A1-208ENST00000488733 NUDCQ9Y266 331 aa26.8■■□□□ 1.88
ATP1A1-208ENST00000488733 EDC4Q6P2E9 1401 aaKnown RBP26.8■■□□□ 1.88
ATP1A1-208ENST00000488733 GGNBP2Q9H3C7 697 aa26.79■■□□□ 1.88
ATP1A1-208ENST00000488733 NCOA3Q9Y6Q9 1424 aa26.79■■□□□ 1.88
ATP1A1-208ENST00000488733 SUPT16HQ9Y5B9 1047 aaKnown RBP26.79■■□□□ 1.88
ATP1A1-208ENST00000488733 KIF20BQ96Q89 1820 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms