RNA–Protein interactions for RNA: ENST00000487976.2

CCDC180-205, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 3,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-205ENST00000487976 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
CCDC180-205ENST00000487976 OFD1O75665 1012 aa13.62□□□□□ -0.23
CCDC180-205ENST00000487976 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
CCDC180-205ENST00000487976 ZFYVE16Q7Z3T8 1539 aa13.62□□□□□ -0.23
CCDC180-205ENST00000487976 COL17A1Q9UMD9 1497 aaPredicted RBP13.62□□□□□ -0.23
CCDC180-205ENST00000487976 RIPK4P57078 832 aa13.62□□□□□ -0.23
CCDC180-205ENST00000487976 WDR43Q15061 677 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC180-205ENST00000487976 SPAG9O60271 1321 aaKnown RBP13.61□□□□□ -0.23
CCDC180-205ENST00000487976 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
CCDC180-205ENST00000487976 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
CCDC180-205ENST00000487976 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
CCDC180-205ENST00000487976 MSNP26038 577 aaKnown RBP13.61□□□□□ -0.23
CCDC180-205ENST00000487976 TERF1P54274 439 aa13.61□□□□□ -0.23
CCDC180-205ENST00000487976 ZSCAN30Q86W11 494 aa13.61□□□□□ -0.23
CCDC180-205ENST00000487976 WDR7Q9Y4E6 1490 aa13.61□□□□□ -0.23
CCDC180-205ENST00000487976 CCDC173Q0VFZ6 552 aa13.6□□□□□ -0.23
CCDC180-205ENST00000487976 SMAP1Q8IYB5 467 aaPredicted RBP13.6□□□□□ -0.23
CCDC180-205ENST00000487976 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
CCDC180-205ENST00000487976 DEPDC5O75140 1603 aa13.6□□□□□ -0.23
CCDC180-205ENST00000487976 TRPM2O94759 1503 aa13.6□□□□□ -0.23
CCDC180-205ENST00000487976 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
CCDC180-205ENST00000487976 ABCA9Q8IUA7 1624 aa13.59□□□□□ -0.23
CCDC180-205ENST00000487976 SLFN5Q08AF3 891 aa13.59□□□□□ -0.23
CCDC180-205ENST00000487976 ANP32BQ92688 251 aaKnown RBP13.59□□□□□ -0.23
CCDC180-205ENST00000487976 CLUAP1Q96AJ1 413 aa13.59□□□□□ -0.23
CCDC180-205ENST00000487976 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
CCDC180-205ENST00000487976 ZNF521Q96K83 1311 aa13.59□□□□□ -0.23
CCDC180-205ENST00000487976 BCAR3O75815 825 aa13.58□□□□□ -0.23
CCDC180-205ENST00000487976 GAS2L3Q86XJ1 694 aa13.58□□□□□ -0.23
CCDC180-205ENST00000487976 CANXP27824 592 aaKnown RBP13.58□□□□□ -0.24
CCDC180-205ENST00000487976 PTPRTO14522 1441 aa13.57□□□□□ -0.24
CCDC180-205ENST00000487976 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
CCDC180-205ENST00000487976 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
CCDC180-205ENST00000487976 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
CCDC180-205ENST00000487976 TESK2Q96S53 571 aa13.57□□□□□ -0.24
CCDC180-205ENST00000487976 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
CCDC180-205ENST00000487976 TET3O43151 1660 aa13.56□□□□□ -0.24
CCDC180-205ENST00000487976 MTERF4Q7Z6M4 381 aaKnown RBP13.56□□□□□ -0.24
CCDC180-205ENST00000487976 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
CCDC180-205ENST00000487976 ZMYM3Q14202 1370 aa13.56□□□□□ -0.24
CCDC180-205ENST00000487976 CEP152O94986 1710 aa13.56□□□□□ -0.24
CCDC180-205ENST00000487976 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
CCDC180-205ENST00000487976 SKOR2Q2VWA4 1001 aaPredicted RBP13.55□□□□□ -0.24
CCDC180-205ENST00000487976 PPP1R9BQ96SB3 815 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 PANK3Q9H999 370 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 VWDEQ8N2E2 1590 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 FANCAO15360 1455 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 NEURL4Q96JN8 1562 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 C22orf23Q9BZE7 217 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 NASPP49321 788 aaPredicted RBP13.55□□□□□ -0.24
CCDC180-205ENST00000487976 TMF1P82094 1093 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 PMFBP1Q8TBY8 1022 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 KANK1Q14678 1352 aa13.55□□□□□ -0.24
CCDC180-205ENST00000487976 PTMSP20962 102 aa13.54□□□□□ -0.24
CCDC180-205ENST00000487976 ARID3AQ99856 593 aa13.54□□□□□ -0.24
CCDC180-205ENST00000487976 COG6Q9Y2V7 657 aa13.54□□□□□ -0.24
CCDC180-205ENST00000487976 AFAP1Q8N556 730 aa13.54□□□□□ -0.24
CCDC180-205ENST00000487976 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
CCDC180-205ENST00000487976 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
CCDC180-205ENST00000487976 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
CCDC180-205ENST00000487976 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
CCDC180-205ENST00000487976 UQCRHP07919 91 aa13.53□□□□□ -0.24
CCDC180-205ENST00000487976 SCAPERQ9BY12 1400 aa13.53□□□□□ -0.24
CCDC180-205ENST00000487976 CDK11BP21127 795 aaKnown RBP13.53□□□□□ -0.24
CCDC180-205ENST00000487976 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
CCDC180-205ENST00000487976 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
CCDC180-205ENST00000487976 IQGAP1P46940 1657 aa13.52□□□□□ -0.24
CCDC180-205ENST00000487976 MFAP1P55081 439 aaKnown RBP13.52□□□□□ -0.24
CCDC180-205ENST00000487976 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.24
CCDC180-205ENST00000487976 PDZRN3Q9UPQ7 1066 aa13.52□□□□□ -0.24
CCDC180-205ENST00000487976 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
CCDC180-205ENST00000487976 TNPO1Q92973 898 aaKnown RBP13.51□□□□□ -0.25
CCDC180-205ENST00000487976 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
CCDC180-205ENST00000487976 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
CCDC180-205ENST00000487976 E9PSI1 815 aa13.5□□□□□ -0.25
CCDC180-205ENST00000487976 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
CCDC180-205ENST00000487976 KIAA1210Q9ULL0 1709 aa13.49□□□□□ -0.25
CCDC180-205ENST00000487976 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
CCDC180-205ENST00000487976 PAXIP1Q6ZW49 1069 aaPredicted RBP13.49□□□□□ -0.25
CCDC180-205ENST00000487976 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
CCDC180-205ENST00000487976 DYNC1I1O14576 645 aa13.49□□□□□ -0.25
CCDC180-205ENST00000487976 CCDC146Q8IYE0 955 aa13.49□□□□□ -0.25
CCDC180-205ENST00000487976 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
CCDC180-205ENST00000487976 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
CCDC180-205ENST00000487976 ASXL2Q76L83 1435 aa13.48□□□□□ -0.25
CCDC180-205ENST00000487976 NCLP19338 710 aaKnown RBP13.48□□□□□ -0.25
CCDC180-205ENST00000487976 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
CCDC180-205ENST00000487976 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
CCDC180-205ENST00000487976 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
CCDC180-205ENST00000487976 DMTNQ08495 405 aa13.47□□□□□ -0.25
CCDC180-205ENST00000487976 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
CCDC180-205ENST00000487976 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
CCDC180-205ENST00000487976 HS1BP3Q53T59 392 aa13.47□□□□□ -0.25
CCDC180-205ENST00000487976 DDIT3P35638 169 aa13.46□□□□□ -0.25
CCDC180-205ENST00000487976 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
CCDC180-205ENST00000487976 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
CCDC180-205ENST00000487976 APAF1O14727 1248 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms