RNA–Protein interactions for RNA: ENST00000487976.2

CCDC180-205, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 3,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-205ENST00000487976 NISCHQ9Y2I1 1504 aa21.26■□□□□ 0.99
CCDC180-205ENST00000487976 HRCP23327 699 aa18.26■□□□□ 0.51
CCDC180-205ENST00000487976 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
CCDC180-205ENST00000487976 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
CCDC180-205ENST00000487976 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
CCDC180-205ENST00000487976 PPARGC1BQ86YN6 1023 aaKnown RBP17.81■□□□□ 0.44
CCDC180-205ENST00000487976 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
CCDC180-205ENST00000487976 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
CCDC180-205ENST00000487976 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
CCDC180-205ENST00000487976 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
CCDC180-205ENST00000487976 MYT1Q01538 1121 aa17.51■□□□□ 0.39
CCDC180-205ENST00000487976 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
CCDC180-205ENST00000487976 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
CCDC180-205ENST00000487976 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
CCDC180-205ENST00000487976 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
CCDC180-205ENST00000487976 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
CCDC180-205ENST00000487976 ABCC9O60706 1549 aa17.15■□□□□ 0.34
CCDC180-205ENST00000487976 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
CCDC180-205ENST00000487976 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
CCDC180-205ENST00000487976 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
CCDC180-205ENST00000487976 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
CCDC180-205ENST00000487976 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
CCDC180-205ENST00000487976 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
CCDC180-205ENST00000487976 NACADO15069 1562 aa16.87■□□□□ 0.29
CCDC180-205ENST00000487976 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
CCDC180-205ENST00000487976 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
CCDC180-205ENST00000487976 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
CCDC180-205ENST00000487976 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
CCDC180-205ENST00000487976 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
CCDC180-205ENST00000487976 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
CCDC180-205ENST00000487976 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
CCDC180-205ENST00000487976 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
CCDC180-205ENST00000487976 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
CCDC180-205ENST00000487976 APLP2Q06481 763 aa16.42■□□□□ 0.22
CCDC180-205ENST00000487976 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
CCDC180-205ENST00000487976 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
CCDC180-205ENST00000487976 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
CCDC180-205ENST00000487976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
CCDC180-205ENST00000487976 WIZO95785 1651 aa16.34■□□□□ 0.21
CCDC180-205ENST00000487976 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
CCDC180-205ENST00000487976 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
CCDC180-205ENST00000487976 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
CCDC180-205ENST00000487976 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
CCDC180-205ENST00000487976 BCL11AQ9H165 835 aa16.24■□□□□ 0.19
CCDC180-205ENST00000487976 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
CCDC180-205ENST00000487976 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
CCDC180-205ENST00000487976 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
CCDC180-205ENST00000487976 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
CCDC180-205ENST00000487976 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
CCDC180-205ENST00000487976 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
CCDC180-205ENST00000487976 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
CCDC180-205ENST00000487976 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
CCDC180-205ENST00000487976 ANP32EQ9BTT0 268 aa16.11■□□□□ 0.17
CCDC180-205ENST00000487976 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
CCDC180-205ENST00000487976 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
CCDC180-205ENST00000487976 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
CCDC180-205ENST00000487976 MIER1Q8N108 512 aa16.02■□□□□ 0.15
CCDC180-205ENST00000487976 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
CCDC180-205ENST00000487976 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
CCDC180-205ENST00000487976 CLSPNQ9HAW4 1339 aa15.98■□□□□ 0.15
CCDC180-205ENST00000487976 SUPT16HQ9Y5B9 1047 aaKnown RBP15.92■□□□□ 0.14
CCDC180-205ENST00000487976 TSHZ2Q9NRE2 1034 aa15.91■□□□□ 0.14
CCDC180-205ENST00000487976 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
CCDC180-205ENST00000487976 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
CCDC180-205ENST00000487976 EEA1Q15075 1411 aa15.83■□□□□ 0.12
CCDC180-205ENST00000487976 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
CCDC180-205ENST00000487976 BAZ1BQ9UIG0 1483 aaKnown RBP15.76■□□□□ 0.11
CCDC180-205ENST00000487976 WRNQ14191 1432 aaPredicted RBP eCLIP15.73■□□□□ 0.11
CCDC180-205ENST00000487976 SOGA1O94964 1423 aa15.73■□□□□ 0.11
CCDC180-205ENST00000487976 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
CCDC180-205ENST00000487976 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
CCDC180-205ENST00000487976 SYNJ1O43426 1573 aa15.63■□□□□ 0.09
CCDC180-205ENST00000487976 GOLGA3Q08378 1498 aa15.63■□□□□ 0.09
CCDC180-205ENST00000487976 RUSC2Q8N2Y8 1516 aa15.62■□□□□ 0.09
CCDC180-205ENST00000487976 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
CCDC180-205ENST00000487976 KIF21BO75037 1637 aa15.58■□□□□ 0.08
CCDC180-205ENST00000487976 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
CCDC180-205ENST00000487976 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
CCDC180-205ENST00000487976 BCANQ96GW7 911 aa15.55■□□□□ 0.08
CCDC180-205ENST00000487976 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
CCDC180-205ENST00000487976 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
CCDC180-205ENST00000487976 TOP2BQ02880 1626 aa15.53■□□□□ 0.08
CCDC180-205ENST00000487976 RBM19Q9Y4C8 960 aaKnown RBP15.52■□□□□ 0.08
CCDC180-205ENST00000487976 CC2D2AQ9P2K1 1620 aa15.51■□□□□ 0.07
CCDC180-205ENST00000487976 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
CCDC180-205ENST00000487976 FKBP8Q14318 412 aa15.46■□□□□ 0.07
CCDC180-205ENST00000487976 EIF5BO60841 1220 aaKnown RBP15.45■□□□□ 0.06
CCDC180-205ENST00000487976 CLIP1P30622 1438 aa15.4■□□□□ 0.06
CCDC180-205ENST00000487976 CFTRP13569 1480 aa15.39■□□□□ 0.05
CCDC180-205ENST00000487976 NEFLP07196 543 aa15.39■□□□□ 0.05
CCDC180-205ENST00000487976 RAPGEF2Q9Y4G8 1499 aa15.38■□□□□ 0.05
CCDC180-205ENST00000487976 MSH5O43196 834 aa15.37■□□□□ 0.05
CCDC180-205ENST00000487976 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
CCDC180-205ENST00000487976 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
CCDC180-205ENST00000487976 CUX1P39880 1505 aa15.34■□□□□ 0.05
CCDC180-205ENST00000487976 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.05
CCDC180-205ENST00000487976 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
CCDC180-205ENST00000487976 PRXQ9BXM0 1461 aa15.33■□□□□ 0.04
CCDC180-205ENST00000487976 NCBP3Q53F19 620 aaKnown RBP15.32■□□□□ 0.04
CCDC180-205ENST00000487976 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms