RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
HSPG2-211ENST00000486901 APBB1O00213 710 aa15.64■□□□□ 0.09
HSPG2-211ENST00000486901 TRIM27P14373 513 aa15.64■□□□□ 0.09
HSPG2-211ENST00000486901 MVPQ14764 893 aaKnown RBP15.64■□□□□ 0.09
HSPG2-211ENST00000486901 TPRNQ4KMQ1 711 aa15.64■□□□□ 0.09
HSPG2-211ENST00000486901 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
HSPG2-211ENST00000486901 TRAPPC8Q9Y2L5 1435 aa15.64■□□□□ 0.09
HSPG2-211ENST00000486901 HSP90AB1P08238 724 aaKnown RBP15.64■□□□□ 0.09
HSPG2-211ENST00000486901 THUMPD2Q9BTF0 503 aaKnown RBP15.63■□□□□ 0.09
HSPG2-211ENST00000486901 NCLP19338 710 aaKnown RBP15.63■□□□□ 0.09
HSPG2-211ENST00000486901 TMEM57Q8N5G2 664 aa15.63■□□□□ 0.09
HSPG2-211ENST00000486901 SCAF11Q99590 1463 aaKnown RBP15.62■□□□□ 0.09
HSPG2-211ENST00000486901 ABCA8O94911 1581 aa15.62■□□□□ 0.09
HSPG2-211ENST00000486901 UGGT1Q9NYU2 1555 aa15.62■□□□□ 0.09
HSPG2-211ENST00000486901 GAS2L3Q86XJ1 694 aa15.62■□□□□ 0.09
HSPG2-211ENST00000486901 MYH16Q9H6N6 1097 aa15.62■□□□□ 0.09
HSPG2-211ENST00000486901 CHMP5Q9NZZ3 219 aa15.62■□□□□ 0.09
HSPG2-211ENST00000486901 NPM1P06748 294 aaKnown RBP eCLIP15.61■□□□□ 0.09
HSPG2-211ENST00000486901 PIK3C2GO75747 1445 aa15.61■□□□□ 0.09
HSPG2-211ENST00000486901 ERBB4Q15303 1308 aa15.61■□□□□ 0.09
HSPG2-211ENST00000486901 CD2BP2O95400 341 aaKnown RBP15.61■□□□□ 0.09
HSPG2-211ENST00000486901 MLECQ14165 292 aa15.61■□□□□ 0.09
HSPG2-211ENST00000486901 FOXD4L5Q5VV16 416 aaPredicted RBP15.6■□□□□ 0.09
HSPG2-211ENST00000486901 FOXD4L4Q8WXT5 416 aaPredicted RBP15.6■□□□□ 0.09
HSPG2-211ENST00000486901 ANKRD45Q5TZF3 282 aa15.6■□□□□ 0.09
HSPG2-211ENST00000486901 NLRP1Q9C000 1473 aa15.6■□□□□ 0.09
HSPG2-211ENST00000486901 NUP160Q12769 1436 aa15.6■□□□□ 0.09
HSPG2-211ENST00000486901 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
HSPG2-211ENST00000486901 GRPEL1Q9HAV7 217 aa15.59■□□□□ 0.09
HSPG2-211ENST00000486901 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
HSPG2-211ENST00000486901 CHAMP1Q96JM3 812 aa15.59■□□□□ 0.09
HSPG2-211ENST00000486901 TNPO1Q92973 898 aaKnown RBP15.58■□□□□ 0.08
HSPG2-211ENST00000486901 MYO5CQ9NQX4 1742 aa15.58■□□□□ 0.08
HSPG2-211ENST00000486901 TTC37Q6PGP7 1564 aa15.58■□□□□ 0.08
HSPG2-211ENST00000486901 CDC42BPBQ9Y5S2 1711 aa15.57■□□□□ 0.08
HSPG2-211ENST00000486901 SRPK2P78362 688 aaKnown RBP15.57■□□□□ 0.08
HSPG2-211ENST00000486901 RIPK4P57078 832 aa15.56■□□□□ 0.08
HSPG2-211ENST00000486901 HSP90AA2PQ14568 343 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-211ENST00000486901 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
HSPG2-211ENST00000486901 HMOX1P09601 288 aa15.55■□□□□ 0.08
HSPG2-211ENST00000486901 ERVK-7P63135 1459 aa15.54■□□□□ 0.08
HSPG2-211ENST00000486901 SSFA2P28290 1259 aa15.54■□□□□ 0.08
HSPG2-211ENST00000486901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
HSPG2-211ENST00000486901 CFAP65Q6ZU64 1925 aaKnown RBP15.54■□□□□ 0.08
HSPG2-211ENST00000486901 FSD2A1L4K1 749 aa15.54■□□□□ 0.08
HSPG2-211ENST00000486901 ATF7IPQ6VMQ6 1270 aa15.54■□□□□ 0.08
HSPG2-211ENST00000486901 SCAPERQ9BY12 1400 aa15.53■□□□□ 0.08
HSPG2-211ENST00000486901 ATAD2Q6PL18 1390 aa15.53■□□□□ 0.08
HSPG2-211ENST00000486901 ESPNB1AK53 854 aa15.53■□□□□ 0.08
HSPG2-211ENST00000486901 FOXD4L6Q3SYB3 417 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-211ENST00000486901 FOXD4L3Q6VB84 417 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-211ENST00000486901 MPNDQ8N594 471 aa15.53■□□□□ 0.08
HSPG2-211ENST00000486901 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-211ENST00000486901 WDR63Q8IWG1 891 aa15.52■□□□□ 0.08
HSPG2-211ENST00000486901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.082e-6■■■□□ 16.5
HSPG2-211ENST00000486901 ATP10AO60312 1499 aa15.52■□□□□ 0.07
HSPG2-211ENST00000486901 ARHGEF5Q12774 1597 aa15.52■□□□□ 0.07
HSPG2-211ENST00000486901 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.07
HSPG2-211ENST00000486901 MRE11P49959 708 aa15.52■□□□□ 0.07
HSPG2-211ENST00000486901 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.07
HSPG2-211ENST00000486901 SLC24A1O60721 1099 aa15.51■□□□□ 0.07
HSPG2-211ENST00000486901 NOS1P29475 1434 aa15.5■□□□□ 0.07
HSPG2-211ENST00000486901 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
HSPG2-211ENST00000486901 POLR3AO14802 1390 aaPredicted RBP15.5■□□□□ 0.07
HSPG2-211ENST00000486901 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
HSPG2-211ENST00000486901 TRIM35Q9UPQ4 493 aa15.5■□□□□ 0.07
HSPG2-211ENST00000486901 NOL8Q76FK4 1167 aaKnown RBP15.49■□□□□ 0.07
HSPG2-211ENST00000486901 CLCN1P35523 988 aa15.49■□□□□ 0.07
HSPG2-211ENST00000486901 GAS2L2Q8NHY3 880 aa15.49■□□□□ 0.07
HSPG2-211ENST00000486901 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
HSPG2-211ENST00000486901 DDX49Q9Y6V7 483 aaKnown RBP15.49■□□□□ 0.07
HSPG2-211ENST00000486901 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
HSPG2-211ENST00000486901 ZMYND15Q9H091 742 aa15.48■□□□□ 0.07
HSPG2-211ENST00000486901 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
HSPG2-211ENST00000486901 KANK1Q14678 1352 aa15.48■□□□□ 0.07
HSPG2-211ENST00000486901 ABCC2Q92887 1545 aa15.48■□□□□ 0.07
HSPG2-211ENST00000486901 PKP1Q13835 747 aa15.48■□□□□ 0.07
HSPG2-211ENST00000486901 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
HSPG2-211ENST00000486901 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
HSPG2-211ENST00000486901 MADDQ8WXG6 1647 aa15.47■□□□□ 0.07
HSPG2-211ENST00000486901 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
HSPG2-211ENST00000486901 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
HSPG2-211ENST00000486901 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
HSPG2-211ENST00000486901 SYNMO15061 1565 aa15.46■□□□□ 0.07
HSPG2-211ENST00000486901 SOX12O15370 315 aa15.46■□□□□ 0.07
HSPG2-211ENST00000486901 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
HSPG2-211ENST00000486901 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.07
HSPG2-211ENST00000486901 PTPRTO14522 1441 aa15.45■□□□□ 0.06
HSPG2-211ENST00000486901 TBC1D9Q6ZT07 1266 aa15.45■□□□□ 0.06
HSPG2-211ENST00000486901 PKNOX2Q96KN3 472 aa15.45■□□□□ 0.06
HSPG2-211ENST00000486901 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
HSPG2-211ENST00000486901 PREX2Q70Z35 1606 aa15.45■□□□□ 0.06
HSPG2-211ENST00000486901 CAVIN1Q6NZI2 390 aaKnown RBP15.45■□□□□ 0.06
HSPG2-211ENST00000486901 DTNBO60941 627 aa15.45■□□□□ 0.06
HSPG2-211ENST00000486901 RBM27Q9P2N5 1060 aaKnown RBP15.44■□□□□ 0.06
HSPG2-211ENST00000486901 PRKAR2BP31323 418 aa15.44■□□□□ 0.06
HSPG2-211ENST00000486901 OTUD7AQ8TE49 926 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-211ENST00000486901 GBP4Q96PP9 640 aa15.44■□□□□ 0.06
HSPG2-211ENST00000486901 NPC1L1Q9UHC9 1359 aa15.44■□□□□ 0.06
HSPG2-211ENST00000486901 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms