RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 XPCQ01831 940 aaPredicted RBP14.14□□□□□ -0.15
CCDC142-208ENST00000486335 FOXO3O43524 673 aa14.13□□□□□ -0.15
CCDC142-208ENST00000486335 RALGAPBQ86X10 1494 aa14.12□□□□□ -0.15
CCDC142-208ENST00000486335 CLTCL1P53675 1640 aa14.12□□□□□ -0.15
CCDC142-208ENST00000486335 SLIT2O94813 1529 aa14.11□□□□□ -0.15
CCDC142-208ENST00000486335 GLI3P10071 1580 aa14.11□□□□□ -0.15
CCDC142-208ENST00000486335 BLMP54132 1417 aaPredicted RBP14.11□□□□□ -0.15
CCDC142-208ENST00000486335 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
CCDC142-208ENST00000486335 UNC5CLQ8IV45 518 aa14.11□□□□□ -0.15
CCDC142-208ENST00000486335 ONECUT3O60422 494 aaPredicted RBP14.1□□□□□ -0.15
CCDC142-208ENST00000486335 NPHP3Q7Z494 1330 aa14.1□□□□□ -0.15
CCDC142-208ENST00000486335 FOXD1Q16676 465 aa14.09□□□□□ -0.15
CCDC142-208ENST00000486335 SPHKAPQ2M3C7 1700 aa14.09□□□□□ -0.15
CCDC142-208ENST00000486335 ITGAEP38570 1179 aa14.08□□□□□ -0.16
CCDC142-208ENST00000486335 SEPT12Q8IYM1 358 aa14.08□□□□□ -0.16
CCDC142-208ENST00000486335 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
CCDC142-208ENST00000486335 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
CCDC142-208ENST00000486335 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
CCDC142-208ENST00000486335 SPATA31A3Q5VYP0 1347 aa14.07□□□□□ -0.16
CCDC142-208ENST00000486335 NUTM2FA1L443 756 aa14.05□□□□□ -0.16
CCDC142-208ENST00000486335 HRCP23327 699 aa14.05□□□□□ -0.16
CCDC142-208ENST00000486335 BRWD3Q6RI45 1802 aa14.05□□□□□ -0.16
CCDC142-208ENST00000486335 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
CCDC142-208ENST00000486335 PLEKHH1Q9ULM0 1364 aa14.04□□□□□ -0.16
CCDC142-208ENST00000486335 MARF1Q9Y4F3 1742 aaKnown RBP14.04□□□□□ -0.16
CCDC142-208ENST00000486335 VPS72Q15906 364 aa14.03□□□□□ -0.16
CCDC142-208ENST00000486335 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
CCDC142-208ENST00000486335 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
CCDC142-208ENST00000486335 ADGRF5Q8IZF2 1346 aa14.03□□□□□ -0.16
CCDC142-208ENST00000486335 NAIPQ13075 1403 aa14.03□□□□□ -0.16
CCDC142-208ENST00000486335 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.02□□□□□ -0.16
CCDC142-208ENST00000486335 LRP5O75197 1615 aa14.02□□□□□ -0.16
CCDC142-208ENST00000486335 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.16
CCDC142-208ENST00000486335 FAM83GA6ND36 823 aa14□□□□□ -0.17
CCDC142-208ENST00000486335 KRT28Q7Z3Y7 464 aa14□□□□□ -0.17
CCDC142-208ENST00000486335 KRT27Q7Z3Y8 459 aa14□□□□□ -0.17
CCDC142-208ENST00000486335 TECPR2O15040 1411 aa13.99□□□□□ -0.17
CCDC142-208ENST00000486335 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
CCDC142-208ENST00000486335 STK26Q9P289 416 aa13.99□□□□□ -0.17
CCDC142-208ENST00000486335 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
CCDC142-208ENST00000486335 PPARGC1BQ86YN6 1023 aaKnown RBP13.98□□□□□ -0.17
CCDC142-208ENST00000486335 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
CCDC142-208ENST00000486335 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
CCDC142-208ENST00000486335 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
CCDC142-208ENST00000486335 KIF1BO60333 1816 aa13.97□□□□□ -0.17
CCDC142-208ENST00000486335 FAM182BQ5T319 152 aa13.96□□□□□ -0.17
CCDC142-208ENST00000486335 SF3B2Q13435 895 aaKnown RBP13.95□□□□□ -0.18
CCDC142-208ENST00000486335 PPLO60437 1756 aa13.94□□□□□ -0.18
CCDC142-208ENST00000486335 CCDC144AA2RUR9 1427 aa13.93□□□□□ -0.18
CCDC142-208ENST00000486335 TNS3Q68CZ2 1445 aa13.93□□□□□ -0.18
CCDC142-208ENST00000486335 R3HDM1Q15032 1099 aaKnown RBP13.93□□□□□ -0.18
CCDC142-208ENST00000486335 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
CCDC142-208ENST00000486335 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
CCDC142-208ENST00000486335 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
CCDC142-208ENST00000486335 BAG6P46379 1132 aa13.92□□□□□ -0.18
CCDC142-208ENST00000486335 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
CCDC142-208ENST00000486335 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
CCDC142-208ENST00000486335 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
CCDC142-208ENST00000486335 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.18
CCDC142-208ENST00000486335 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
CCDC142-208ENST00000486335 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
CCDC142-208ENST00000486335 RGL3Q3MIN7 710 aa13.9□□□□□ -0.18
CCDC142-208ENST00000486335 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
CCDC142-208ENST00000486335 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
CCDC142-208ENST00000486335 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
CCDC142-208ENST00000486335 DISP2A7MBM2 1401 aa13.9□□□□□ -0.19
CCDC142-208ENST00000486335 NRXN1Q9ULB1 1477 aa13.89□□□□□ -0.19
CCDC142-208ENST00000486335 BTG4Q9NY30 223 aa13.89□□□□□ -0.19
CCDC142-208ENST00000486335 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
CCDC142-208ENST00000486335 YTHDC2Q9H6S0 1430 aaKnown RBP13.89□□□□□ -0.19
CCDC142-208ENST00000486335 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
CCDC142-208ENST00000486335 PSME1Q06323 249 aa13.88□□□□□ -0.19
CCDC142-208ENST00000486335 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
CCDC142-208ENST00000486335 SPATA31A5Q5VU36 1347 aa13.88□□□□□ -0.19
CCDC142-208ENST00000486335 SPATA31A7Q8IWB4 1347 aa13.88□□□□□ -0.19
CCDC142-208ENST00000486335 RGPD8O14715 1765 aaPredicted RBP13.87□□□□□ -0.19
CCDC142-208ENST00000486335 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
CCDC142-208ENST00000486335 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
CCDC142-208ENST00000486335 KIF1AQ12756 1690 aa13.86□□□□□ -0.19
CCDC142-208ENST00000486335 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
CCDC142-208ENST00000486335 NRAPQ86VF7 1730 aa13.86□□□□□ -0.19
CCDC142-208ENST00000486335 ABCA3Q99758 1704 aa13.86□□□□□ -0.19
CCDC142-208ENST00000486335 LMOD2Q6P5Q4 547 aa13.85□□□□□ -0.19
CCDC142-208ENST00000486335 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
CCDC142-208ENST00000486335 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
CCDC142-208ENST00000486335 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
CCDC142-208ENST00000486335 CFAP70Q5T0N1 1121 aa13.84□□□□□ -0.19
CCDC142-208ENST00000486335 SAFB2Q14151 953 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC142-208ENST00000486335 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
CCDC142-208ENST00000486335 PRR36Q9H6K5 1346 aa13.83□□□□□ -0.2
CCDC142-208ENST00000486335 A0A0G2JS52 829 aa13.82□□□□□ -0.2
CCDC142-208ENST00000486335 TRIM37O94972 964 aa13.82□□□□□ -0.2
CCDC142-208ENST00000486335 MYT1Q01538 1121 aa13.82□□□□□ -0.2
CCDC142-208ENST00000486335 THSD7AQ9UPZ6 1657 aa13.82□□□□□ -0.2
CCDC142-208ENST00000486335 YY1P25490 414 aa13.81□□□□□ -0.2
CCDC142-208ENST00000486335 TNS1Q9HBL0 1735 aaKnown RBP13.81□□□□□ -0.2
CCDC142-208ENST00000486335 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
CCDC142-208ENST00000486335 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
CCDC142-208ENST00000486335 SPATA31A1Q5TZJ5 1347 aa13.8□□□□□ -0.2
CCDC142-208ENST00000486335 ACIN1Q9UKV3 1341 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms